Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= AAMG01001821.1
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
seq696 122 7e-26
>seq696
Length=154923
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| ||| ||||||| |||||||||
Sbjct 102567 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGG 102508
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 102507 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 102448
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 102447 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 102408
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| ||| ||||||| |||||||||
Sbjct 136829 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGG 136888
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 136889 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 136948
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 136949 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 136988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415997195120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |