Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq3 316 4e-84
>seq3
Length=24464547
Score = 316 bits (350), Expect = 4e-84
Identities = 262/316 (83%), Gaps = 13/316 (4%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA------GGCCCGCTTTGGCGGGTCGCCGGCT 73
|| |||||||| | |||||||| |||| | ||| | || ||| ||||||
Sbjct 24368040 GAACGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCCTTCACGG----CCGGCT 24367985
Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132
||||||||||||||| | | | || | | ||||||||||||||||||||||||||||||
Sbjct 24367984 TCTTAGAGGGACTATGGCCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGAT 24367925
Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192
|||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct 24367924 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTCA-CACC 24367866
Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252
||||||| ||| | |||||||||| | ||| | ||||| |||||||||| |||||||
Sbjct 24367865 TTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTGCA 24367807
Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312
||| ||| |||| |||||||||| ||||||||||||| ||||||||| |||||||| |||
Sbjct 24367806 ATTGTTGGTCTTAAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC 24367747
Query 313 GTCCCTGCCCTTTGTA 328
||||||||||||||||
Sbjct 24367746 GTCCCTGCCCTTTGTA 24367731
Score = 316 bits (350), Expect = 4e-84
Identities = 262/316 (83%), Gaps = 13/316 (4%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA------GGCCCGCTTTGGCGGGTCGCCGGCT 73
|| |||||||| | |||||||| |||| | ||| | || ||| ||||||
Sbjct 24377447 GAACGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCCTTCACGG----CCGGCT 24377392
Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132
||||||||||||||| | | | || | | ||||||||||||||||||||||||||||||
Sbjct 24377391 TCTTAGAGGGACTATGGCCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGAT 24377332
Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192
|||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct 24377331 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTCA-CACC 24377273
Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252
||||||| ||| | |||||||||| | ||| | ||||| |||||||||| |||||||
Sbjct 24377272 TTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTGCA 24377214
Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312
||| ||| |||| |||||||||| ||||||||||||| ||||||||| |||||||| |||
Sbjct 24377213 ATTGTTGGTCTTAAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC 24377154
Query 313 GTCCCTGCCCTTTGTA 328
||||||||||||||||
Sbjct 24377153 GTCCCTGCCCTTTGTA 24377138
Score = 316 bits (350), Expect = 4e-84
Identities = 262/316 (83%), Gaps = 13/316 (4%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA------GGCCCGCTTTGGCGGGTCGCCGGCT 73
|| |||||||| | |||||||| |||| | ||| | || ||| ||||||
Sbjct 24386571 GAACGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCCTTCACGG----CCGGCT 24386626
Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132
||||||||||||||| | | | || | | ||||||||||||||||||||||||||||||
Sbjct 24386627 TCTTAGAGGGACTATGGCCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGAT 24386686
Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192
|||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct 24386687 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTCA-CACC 24386745
Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252
||||||| ||| | |||||||||| | ||| | ||||| |||||||||| |||||||
Sbjct 24386746 TTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTGCA 24386804
Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312
||| ||| |||| |||||||||| ||||||||||||| ||||||||| |||||||| |||
Sbjct 24386805 ATTGTTGGTCTTAAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC 24386864
Query 313 GTCCCTGCCCTTTGTA 328
||||||||||||||||
Sbjct 24386865 GTCCCTGCCCTTTGTA 24386880
Score = 316 bits (350), Expect = 4e-84
Identities = 262/316 (83%), Gaps = 13/316 (4%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA------GGCCCGCTTTGGCGGGTCGCCGGCT 73
|| |||||||| | |||||||| |||| | ||| | || ||| ||||||
Sbjct 24396032 GAACGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCCTTCACGG----CCGGCT 24396087
Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132
||||||||||||||| | | | || | | ||||||||||||||||||||||||||||||
Sbjct 24396088 TCTTAGAGGGACTATGGCCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGAT 24396147
Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192
|||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct 24396148 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTCA-CACC 24396206
Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252
||||||| ||| | |||||||||| | ||| | ||||| |||||||||| |||||||
Sbjct 24396207 TTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTGCA 24396265
Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312
||| ||| |||| |||||||||| ||||||||||||| ||||||||| |||||||| |||
Sbjct 24396266 ATTGTTGGTCTTAAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC 24396325
Query 313 GTCCCTGCCCTTTGTA 328
||||||||||||||||
Sbjct 24396326 GTCCCTGCCCTTTGTA 24396341
Score = 316 bits (350), Expect = 4e-84
Identities = 262/316 (83%), Gaps = 13/316 (4%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA------GGCCCGCTTTGGCGGGTCGCCGGCT 73
|| |||||||| | |||||||| |||| | ||| | || ||| ||||||
Sbjct 24406942 GAACGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCCTTCACGG----CCGGCT 24406997
Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132
||||||||||||||| | | | || | | ||||||||||||||||||||||||||||||
Sbjct 24406998 TCTTAGAGGGACTATGGCCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGAT 24407057
Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192
|||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct 24407058 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTCA-CACC 24407116
Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252
||||||| ||| | |||||||||| | ||| | ||||| |||||||||| |||||||
Sbjct 24407117 TTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTGCA 24407175
Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312
||| ||| |||| |||||||||| ||||||||||||| ||||||||| |||||||| |||
Sbjct 24407176 ATTGTTGGTCTTAAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC 24407235
Query 313 GTCCCTGCCCTTTGTA 328
||||||||||||||||
Sbjct 24407236 GTCCCTGCCCTTTGTA 24407251
Score = 316 bits (350), Expect = 4e-84
Identities = 262/316 (83%), Gaps = 13/316 (4%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA------GGCCCGCTTTGGCGGGTCGCCGGCT 73
|| |||||||| | |||||||| |||| | ||| | || ||| ||||||
Sbjct 24415780 GAACGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCCTTCACGG----CCGGCT 24415835
Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132
||||||||||||||| | | | || | | ||||||||||||||||||||||||||||||
Sbjct 24415836 TCTTAGAGGGACTATGGCCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGAT 24415895
Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192
|||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct 24415896 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTCA-CACC 24415954
Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252
||||||| ||| | |||||||||| | ||| | ||||| |||||||||| |||||||
Sbjct 24415955 TTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTGCA 24416013
Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312
||| ||| |||| |||||||||| ||||||||||||| ||||||||| |||||||| |||
Sbjct 24416014 ATTGTTGGTCTTAAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC 24416073
Query 313 GTCCCTGCCCTTTGTA 328
||||||||||||||||
Sbjct 24416074 GTCCCTGCCCTTTGTA 24416089
Score = 316 bits (350), Expect = 4e-84
Identities = 262/316 (83%), Gaps = 13/316 (4%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA------GGCCCGCTTTGGCGGGTCGCCGGCT 73
|| |||||||| | |||||||| |||| | ||| | || ||| ||||||
Sbjct 24435515 GAACGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCCTTCACGG----CCGGCT 24435570
Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132
||||||||||||||| | | | || | | ||||||||||||||||||||||||||||||
Sbjct 24435571 TCTTAGAGGGACTATGGCCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGAT 24435630
Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192
|||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct 24435631 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTCA-CACC 24435689
Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252
||||||| ||| | |||||||||| | ||| | ||||| |||||||||| |||||||
Sbjct 24435690 TTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTGCA 24435748
Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312
||| ||| |||| |||||||||| ||||||||||||| ||||||||| |||||||| |||
Sbjct 24435749 ATTGTTGGTCTTAAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC 24435808
Query 313 GTCCCTGCCCTTTGTA 328
||||||||||||||||
Sbjct 24435809 GTCCCTGCCCTTTGTA 24435824
Score = 313 bits (346), Expect = 5e-83
Identities = 262/316 (83%), Gaps = 14/316 (4%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA------GGCCCGCTTTGGCGGGTCGCCGGCT 73
|| |||||||| | |||||||| |||| | ||| | || ||| ||||||
Sbjct 24341257 GAACGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCCTTCACGG----CCGGCT 24341202
Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132
||||||||||||||| | | | || | | ||||||||||||||||||||||||||||||
Sbjct 24341201 TCTTAGAGGGACTATGGCCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGAT 24341142
Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192
|||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct 24341141 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTCA-CACC 24341083
Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252
||||||| ||| | |||||||||| | ||| | ||||| |||||||||| |||||||
Sbjct 24341082 TTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTGCA 24341024
Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312
||| ||| |||| |||||||||| ||||||||||||| ||||||||| |||||||| |||
Sbjct 24341023 ATTGTTGGTCTTAAACGAGGAAT-CCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC 24340965
Query 313 GTCCCTGCCCTTTGTA 328
||||||||||||||||
Sbjct 24340964 GTCCCTGCCCTTTGTA 24340949
Score = 313 bits (346), Expect = 5e-83
Identities = 262/316 (83%), Gaps = 14/316 (4%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA------GGCCCGCTTTGGCGGGTCGCCGGCT 73
|| |||||||| | |||||||| |||| | ||| | || ||| ||||||
Sbjct 24351885 GAACGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCCTTCACGG----CCGGCT 24351830
Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132
||||||||||||||| | | | || | | ||||||||||||||||||||||||||||||
Sbjct 24351829 TCTTAGAGGGACTATGGCCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGAT 24351770
Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192
|||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct 24351769 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTCA-CACC 24351711
Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252
||||||| ||| | |||||||||| | ||| | ||||| |||||||||| |||||||
Sbjct 24351710 TTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTGCA 24351652
Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312
||| ||| |||| |||||||||| ||||||||||||| ||||||||| |||||||| |||
Sbjct 24351651 ATTGTTGGTCTT-AACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC 24351593
Query 313 GTCCCTGCCCTTTGTA 328
||||||||||||||||
Sbjct 24351592 GTCCCTGCCCTTTGTA 24351577
Score = 302 bits (334), Expect = 9e-80
Identities = 261/316 (83%), Gaps = 17/316 (5%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA------GGCCCGCTTTGGCGGGTCGCCGGCT 73
|| |||||||| | |||||||| |||| | ||| | || ||| ||||||
Sbjct 24331782 GAACGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCCTTCACGG----CCGGCT 24331727
Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132
||||||||||||||| | | | || | | ||||||||||||||||||||||||||||||
Sbjct 24331726 TCTTAGAGGGACTATGGCCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGAT 24331667
Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192
|||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct 24331666 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTCA-CACC 24331608
Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252
||||||| ||| | |||| ||||| | || | | ||||| |||||||||| |||||||
Sbjct 24331607 TTGGCCGACAGGCCCGGGT-ATCTT-TGAA--TTTCTCGTGATGGGGATAGATCATTGCA 24331552
Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312
||| ||| |||| |||||||||| ||||||||||||| ||||||||| |||||||| |||
Sbjct 24331551 ATTGTTGGTCTTAAACGAGGAAT-CCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC 24331493
Query 313 GTCCCTGCCCTTTGTA 328
||||||||||||||||
Sbjct 24331492 GTCCCTGCCCTTTGTA 24331477
Score = 297 bits (328), Expect = 4e-78
Identities = 260/316 (82%), Gaps = 17/316 (5%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA------GGCCCGCTTTGGCGGGTCGCCGGCT 73
|| |||||||| | |||||||| |||| | ||| | || ||| ||||||
Sbjct 24425518 GAACGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCCTTCACGG----CCGGCT 24425573
Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132
||||||||||||||| | | | || | | ||||||| ||||||||||||||||||||||
Sbjct 24425574 TCTTAGAGGGACTATGGCCGTTTAGGCCAAGGAAGTT-GAGGCAATAACAGGTCTGTGAT 24425632
Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192
|||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct 24425633 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA-TGTATCAACGAGTTCA-CACC 24425690
Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252
||||||| ||| | ||||||||| || || | ||||| |||||||||| |||||||
Sbjct 24425691 TTGGCCGACAGGCCCGGGTAATCT--TTGAATTTCATCGTGATGGGGATAGATCATTGCA 24425748
Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312
||| ||| |||| |||||||||| ||||||||||||| ||||||||| |||||||| |||
Sbjct 24425749 ATTGTTGGTCTTAAACGAGGAAT-CCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC 24425807
Query 313 GTCCCTGCCCTTTGTA 328
||||||||||||||||
Sbjct 24425808 GTCCCTGCCCTTTGTA 24425823
Score = 203 bits (224), Expect = 6e-50
Identities = 155/181 (86%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 148 GGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCT 207
||||||||||||||||||||||| | ||||||||||| ||||||||||| ||| |
Sbjct 24313115 GGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTCA-CACCTTGGCCGACAGGCCC 24313057
Query 208 GGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAA 267
|||||||||| | ||| | ||||| |||||||||| |||||||||| ||| |||| ||
Sbjct 24313056 GGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTAAA 24312998
Query 268 CGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327
|||||||| ||||||||||||| ||||||||| |||||||| |||||||||| |||||||
Sbjct 24312997 CGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGTCCTTTGT 24312938
Query 328 A 328
|
Sbjct 24312937 A 24312937
Score = 190 bits (210), Expect = 4e-46
Identities = 180/226 (80%), Gaps = 4/226 (2%)
Strand=Plus/Plus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
|||||||||| |||| ||||||| | ||||||| |||||||||||||||||||| ||| |
Sbjct 19679829 GGAAGTTTGACGCAAAAACAGGTGTATGATGCCTTTAGATGTTCTGGGCCGCACACGCAC 19679888
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
|||||||| | || |||||||| ||||| || | ||| | |||||||| ||
Sbjct 19679889 TACACTGATGTAA--AATGAGTTCAT-ACCTTAATCGACACGTCCGAGTAATCTTTGAAA 19679945
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
||| | ||| |||||||||| |||| ||||| || ||||||||||||||| ||||||
Sbjct 19679946 TTTCT-TGGTGATGGGGATAGATCATTATAATTAATGTTCTTCAACGAGGAATTCCTAGT 19680004
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||| | ||||||| || |||||||||||| |||||||||||
Sbjct 19680005 AAGCAAGAGTCATCAAATCGTTTTGATTACGTCCTTGCCCTTTGTA 19680050
Score = 156 bits (172), Expect = 8e-36
Identities = 141/176 (80%), Gaps = 11/176 (6%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCA------GGCCCGCTTTGGCGGGTCGCCGGCT 73
|| |||||||| | |||||||| |||| | ||| | || ||| ||||||
Sbjct 24322385 GAACGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCCTTCACGG----CCGGCT 24322330
Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132
||||||||||||||| | | | || | | ||||||||||||||||||||||||||||||
Sbjct 24322329 TCTTAGAGGGACTATGGCCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGAT 24322270
Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188
|||||||||||||||||||||||||||||||||||||| | ||||||||| ||
Sbjct 24322269 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTAAT 24322214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947193407488
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