Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq3 630 2e-178
seq7 379 6e-103
seq8 170 6e-40
seq5 170 6e-40
seq2 170 6e-40
seq1 170 6e-40
>seq3
Length=24464547
Score = 630 bits (698), Expect = 2e-178
Identities = 452/513 (88%), Gaps = 12/513 (2%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| || |||||||| |||| ||||||||||||||||||
Sbjct 24323190 GTACTCATTCCAATTACCAGACTCATAAGAGCCCGGTATTGTTATTTATTGTCACTACCT 24323249
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 24323250 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 24323309
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||
Sbjct 24323310 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTACCACCATGGTA 24323369
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||
Sbjct 24323370 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCA 24323429
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAG----GG 293
| ||||||||||||| ||| |||||| |||||||| || |||| | | || |
Sbjct 24323430 CAAAGGCCATGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAGAGCCCG 24323487
Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATT 352
||| | ||||||||||||||| |||||||||| ||||||||||||| | ||| |||||
Sbjct 24323488 CGTCGACCTTTTATCTAATAAATGCACCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATT 24323547
Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412
|||||||||||||| |||||||||| ||||| || ||| |||||| |||| ||||||||
Sbjct 24323548 AGCTCTAGAATTACTACGGTTATCCGAGTAGT-AGTTACCATCAAACAAACTATAACTGA 24323606
Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCT 471
||||||||||||||||||||||||| || | ||| | | ||||||| ||||||||||||
Sbjct 24323607 TTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTCGTTCATACTTACACATGCATGGCT 24323666
Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||
Sbjct 24323667 TAATCTTTGAGACAAGCATATGACTACTGGCAG 24323699
Score = 630 bits (698), Expect = 2e-178
Identities = 452/513 (88%), Gaps = 12/513 (2%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| || |||||||| |||| ||||||||||||||||||
Sbjct 24395227 GTACTCATTCCAATTACCAGACTCATAAGAGCCCGGTATTGTTATTTATTGTCACTACCT 24395168
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 24395167 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 24395108
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||
Sbjct 24395107 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTACCACCATGGTA 24395048
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||
Sbjct 24395047 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCA 24394988
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAG----GG 293
| ||||||||||||| ||| |||||| |||||||| || |||| | | || |
Sbjct 24394987 CAAAGGCCATGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAGAGCCCG 24394930
Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATT 352
||| | ||||||||||||||| |||||||||| ||||||||||||| | ||| |||||
Sbjct 24394929 CGTCGACCTTTTATCTAATAAATGCACCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATT 24394870
Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412
|||||||||||||| |||||||||| ||||| || ||| |||||| |||| ||||||||
Sbjct 24394869 AGCTCTAGAATTACTACGGTTATCCGAGTAGT-AGTTACCATCAAACAAACTATAACTGA 24394811
Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCT 471
||||||||||||||||||||||||| || | ||| | | ||||||| ||||||||||||
Sbjct 24394810 TTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTCGTTCATACTTACACATGCATGGCT 24394751
Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||
Sbjct 24394750 TAATCTTTGAGACAAGCATATGACTACTGGCAG 24394718
Score = 630 bits (698), Expect = 2e-178
Identities = 452/513 (88%), Gaps = 12/513 (2%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| || |||||||| |||| ||||||||||||||||||
Sbjct 24406137 GTACTCATTCCAATTACCAGACTCATAAGAGCCCGGTATTGTTATTTATTGTCACTACCT 24406078
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 24406077 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 24406018
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||
Sbjct 24406017 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTACCACCATGGTA 24405958
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||
Sbjct 24405957 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCA 24405898
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAG----GG 293
| ||||||||||||| ||| |||||| |||||||| || |||| | | || |
Sbjct 24405897 CAAAGGCCATGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAGAGCCCG 24405840
Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATT 352
||| | ||||||||||||||| |||||||||| ||||||||||||| | ||| |||||
Sbjct 24405839 CGTCGACCTTTTATCTAATAAATGCACCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATT 24405780
Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412
|||||||||||||| |||||||||| ||||| || ||| |||||| |||| ||||||||
Sbjct 24405779 AGCTCTAGAATTACTACGGTTATCCGAGTAGT-AGTTACCATCAAACAAACTATAACTGA 24405721
Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCT 471
||||||||||||||||||||||||| || | ||| | | ||||||| ||||||||||||
Sbjct 24405720 TTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTCGTTCATACTTACACATGCATGGCT 24405661
Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||
Sbjct 24405660 TAATCTTTGAGACAAGCATATGACTACTGGCAG 24405628
Score = 630 bits (698), Expect = 2e-178
Identities = 452/513 (88%), Gaps = 12/513 (2%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| || |||||||| |||| ||||||||||||||||||
Sbjct 24434710 GTACTCATTCCAATTACCAGACTCATAAGAGCCCGGTATTGTTATTTATTGTCACTACCT 24434651
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 24434650 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 24434591
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||
Sbjct 24434590 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTACCACCATGGTA 24434531
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||
Sbjct 24434530 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCA 24434471
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAG----GG 293
| ||||||||||||| ||| |||||| |||||||| || |||| | | || |
Sbjct 24434470 CAAAGGCCATGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAGAGCCCG 24434413
Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATT 352
||| | ||||||||||||||| |||||||||| ||||||||||||| | ||| |||||
Sbjct 24434412 CGTCGACCTTTTATCTAATAAATGCACCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATT 24434353
Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412
|||||||||||||| |||||||||| ||||| || ||| |||||| |||| ||||||||
Sbjct 24434352 AGCTCTAGAATTACTACGGTTATCCGAGTAGT-AGTTACCATCAAACAAACTATAACTGA 24434294
Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCT 471
||||||||||||||||||||||||| || | ||| | | ||||||| ||||||||||||
Sbjct 24434293 TTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTCGTTCATACTTACACATGCATGGCT 24434234
Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||
Sbjct 24434233 TAATCTTTGAGACAAGCATATGACTACTGGCAG 24434201
Score = 627 bits (694), Expect = 3e-177
Identities = 452/513 (88%), Gaps = 13/513 (3%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| || |||||||| |||| ||||||||||||||||||
Sbjct 24414975 GTACTCATTCCAATTACCAGACTCATAAGAGCCCGGTATTGTTATTTATTGTCACTACCT 24414916
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 24414915 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 24414856
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||
Sbjct 24414855 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTACCACCATGGTA 24414796
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||
Sbjct 24414795 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCA 24414736
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAG----GG 293
| ||||||||||||| ||| |||||| |||||||| || |||| | | || |
Sbjct 24414735 CAAAGGCCATGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAGAGCCCG 24414678
Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATT 352
||| | ||||||||||||||| |||||||||| ||||||||||||| | ||| |||||
Sbjct 24414677 CGTCGACCTTTTATCTAATAAATGCACCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATT 24414618
Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412
|||||||||||||| ||||||||| | ||||| || ||| |||||| |||| ||||||||
Sbjct 24414617 AGCTCTAGAATTACTACGGTTATCGA-GTAGT-AGTTACCATCAAACAAACTATAACTGA 24414560
Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCT 471
||||||||||||||||||||||||| || | ||| | | ||||||| ||||||||||||
Sbjct 24414559 TTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTCGTTCATACTTACACATGCATGGCT 24414500
Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||
Sbjct 24414499 TAATCTTTGAGACAAGCATATGACTACTGGCAG 24414467
Score = 618 bits (684), Expect = 1e-174
Identities = 451/513 (88%), Gaps = 14/513 (3%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| || |||||||| |||| ||||||||||||||||||
Sbjct 24342061 GTACTCATTCCAATTACCAGACTCATAAGAGCCCGGTATTGTTATTTATTGTCACTACCT 24342120
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 24342121 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 24342180
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||
Sbjct 24342181 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTACCACCATGGTA 24342240
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||
Sbjct 24342241 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCA 24342300
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAG----GG 293
| ||||||||||||| ||| |||||| |||||||| || |||| | | || |
Sbjct 24342301 CAAAGGCCATGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAGAGCCCG 24342358
Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATT 352
||| | ||||||||||||||| |||||||||| ||||||||||||| | ||| |||||
Sbjct 24342359 CGTCGACCTTTTATCTAATAAATGCACCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATT 24342418
Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412
|||||||||||||| ||||||||| | ||||| || ||| |||||| |||| ||||||||
Sbjct 24342419 AGCTCTAGAATTACTACGGTTATCGA-GTAGT-AGTTACCATCAAACAAACTATAACTGA 24342476
Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCT 471
||||||||||||||||||| ||||| || | ||| | | ||||||| ||||||||||||
Sbjct 24342477 TTTAATGAGCCATTCGCAG-TTCACAGTCTGAATTCGTTCATACTTACACATGCATGGCT 24342535
Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||
Sbjct 24342536 TAATCTTTGAGACAAGCATATGACTACTGGCAG 24342568
Score = 603 bits (668), Expect = 3e-170
Identities = 448/514 (87%), Gaps = 15/514 (3%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| || |||||||| |||| ||||||||||||||||||
Sbjct 24352688 GTACTCATTCCAATTACCAGACTCATAAGAGCCCGGTATTGTTATTTATTGTCACTACCT 24352747
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 24352748 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 24352807
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTC-CCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||||||||||||||||||||| | || || | | ||||||||
Sbjct 24352808 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCGTGTGACGCAT--CAACCATGGT 24352865
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||
Sbjct 24352866 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGC 24352925
Query 240 TC-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAG----G 292
| ||||||||||||| ||| |||||| |||||||| || |||| | | ||
Sbjct 24352926 ACAAAGGCCATGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAGAGCCC 24352983
Query 293 GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTAT 351
|||| | ||||||||||||||| |||||||||| ||||||||||||| | ||| ||||
Sbjct 24352984 GCGTCGACCTTTTATCTAATAAATGCACCCCTTCCAGAAGTCGGGGTTTGTTGCACGTAT 24353043
Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTG 411
||||||||||||||| |||||||||| ||||| || ||| |||||| |||| |||||||
Sbjct 24353044 TAGCTCTAGAATTACTACGGTTATCCGAGTAGT-AGTTACCATCAAACAAACTATAACTG 24353102
Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGC 470
|||||||||||||||||||||||||| || | ||| | | ||||||| |||||||||||
Sbjct 24353103 ATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTCGTTCATACTTACACATGCATGGC 24353162
Query 471 TTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||
Sbjct 24353163 TTAATCTTTGAGACAAGCATATGACTACTGGCAG 24353196
Score = 601 bits (666), Expect = 1e-169
Identities = 449/513 (88%), Gaps = 16/513 (3%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| || |||||||| |||| ||||||||||||||||||
Sbjct 24332582 GTACTCATTCCAATTACCAGACTCATAAGAGCCCGGTATTGTTATTTATTGTCACTACCT 24332641
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 24332642 CCCCGTGTCAGGATTGGGTAATTTGCGCGC-TGCTGCCTTCCTTGGATGTGGTAGCCGTT 24332700
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||
Sbjct 24332701 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTACCACCATGGTA 24332760
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||||||||||||||||||||||| |||||||| | ||||| ||
Sbjct 24332761 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAA-TTGAATGATGCGTCGCCAGCA 24332819
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAG----GG 293
| ||||||||||||| ||| |||||| |||||||| || |||| | | || |
Sbjct 24332820 CAAAGGCCATGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAGAGCCCG 24332877
Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATT 352
||| | ||||||||||||||| |||||||||| ||||||||||||| | ||| |||||
Sbjct 24332878 CGTCGACCTTTTATCTAATAAATGCACCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATT 24332937
Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412
|||||||||||||| ||||||||| | ||||| || ||| |||||| |||| ||||||||
Sbjct 24332938 AGCTCTAGAATTACTACGGTTATCGA-GTAGT-AGTTACCATCAAACAAACTATAACTGA 24332995
Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCT 471
||| ||||||||||||||||||||| || | ||| | | ||||||| ||||||||||||
Sbjct 24332996 TTT-ATGAGCCATTCGCAGTTTCACAGTCTGAATTCGTTCATACTTACACATGCATGGCT 24333054
Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||
Sbjct 24333055 TAATCTTTGAGACAAGCATATGACTACTGGCAG 24333087
Score = 499 bits (552), Expect = 9e-139
Identities = 424/519 (82%), Gaps = 29/519 (6%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| || |||||||| |||| ||||||||||||||||||
Sbjct 24368843 GTACTCATTCCAATTACCAGACTCATAAGAGCCCGGTATTGTTATTTATTGTCACTACCT 24368902
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 24368903 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 24368962
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||
Sbjct 24368963 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTACCACCATGGTA 24369022
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||
Sbjct 24369023 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCA 24369082
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299
| ||||||||||||| ||| |||||| |||||||| || |||| || || | ||
Sbjct 24369083 CAAAGGCCATGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACG--GGCAGACGG 24369138
Query 300 TTTTTTATCTAATAAATACACCCCTTCCGAAGTCG-GGGTTTTTAGCATGTAT------- 351
| || | || | || || | | | |||| | ||
Sbjct 24369139 TGGTT---------ACGGGACGGCGAGGGAGGTTGACGATGAGTAGCTCGAATCGCCTAG 24369189
Query 352 -----TAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGAT 406
|||||||||||||| |||||||||| ||||| || ||| |||||| |||| ||
Sbjct 24369190 ACTCCAAGCTCTAGAATTACTACGGTTATCCGAGTAGT-AGTTACCATCAAACAAACTAT 24369248
Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGC 465
||||||||||||||||||||||||||||||| || | ||| | | ||||||| ||||||
Sbjct 24369249 AACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTCGTTCATACTTACACATGC 24369308
Query 466 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||||||||
Sbjct 24369309 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 24369347
Score = 358 bits (396), Expect = 2e-96
Identities = 222/238 (93%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| || |||||||| |||| ||||||||||||||||||
Sbjct 24424719 GTACTCATTCCAATTACCAGACTCATAAGAGCCCGGTATTGTTATTTATTGTCACTACCT 24424660
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 24424659 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 24424600
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||
Sbjct 24424599 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTACCACCATGGTA 24424540
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 24424539 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGG 24424482
Score = 259 bits (286), Expect = 1e-66
Identities = 163/176 (93%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| || |||||||| |||| ||||||||||||||||||
Sbjct 24378252 GTACTCATTCCAATTACCAGACTCATAAGAGCCCGGTATTGTTATTTATTGTCACTACCT 24378311
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 24378312 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 24378371
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCAT 176
||||||||||||||||||||||||||||||||||| |||| ||||||| |||||
Sbjct 24378372 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTACCACCAT 24378427
Score = 188 bits (208), Expect = 2e-45
Identities = 138/158 (87%), Gaps = 7/158 (4%)
Strand=Plus/Minus
Query 348 GTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATA 407
||||||||||||||||||| ||||| | |||||| | ||| |||||| |||| |||
Sbjct 24424373 GTATTAGCTCTAGAATTACTACGGTGA-----GTAGTA-GTTACCATCAAACAAACTATA 24424320
Query 408 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACATGCA 466
|||||||||||||||||||||||||||||| || | ||| || ||||||| |||||||
Sbjct 24424319 ACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTCGTTCATACTTACACATGCA 24424260
Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||
Sbjct 24424259 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 24424222
Score = 100 bits (110), Expect = 9e-19
Identities = 68/75 (91%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 24360581 GTCGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCA 24360522
Query 238 GCTC-AAGGCCATGC 251
|| | ||||||||||
Sbjct 24360521 GCACAAAGGCCATGC 24360507
Score = 87.8 bits (96), Expect = 5e-15
Identities = 58/63 (92%), Gaps = 1/63 (2%)
Strand=Plus/Plus
Query 302 TTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
||||||||||||||| |||||||||| ||||||||||||| | ||| |||||||||||||
Sbjct 24378556 TTTTATCTAATAAATGCACCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAG 24378615
Query 361 AAT 363
|||
Sbjct 24378616 AAT 24378618
Score = 87.8 bits (96), Expect = 5e-15
Identities = 99/128 (77%), Gaps = 10/128 (8%)
Strand=Plus/Plus
Query 221 TGAATGAACCATCGCCGGCTCAA-GGCCATGCGATTCGTTAAGTTATTATGAATCACCAA 279
||||||| | ||||| || ||| ||||||||||| ||| |||||| |||||||| ||
Sbjct 24385642 TGAATGATGCGTCGCCAGCACAAAGGCCATGCGATCCGTCGAGTTATCATGAATCATCA- 24385700
Query 280 GGAGC--CCCGAAG----GGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGT 332
|||| | | || |||| | ||||||||||||||| |||||||||| |||||
Sbjct 24385701 -GAGCAACGGGCAGAGCCCGCGTCGACCTTTTATCTAATAAATGCACCCCTTCCAGAAGT 24385759
Query 333 CGGGGTTT 340
||||||||
Sbjct 24385760 CGGGGTTT 24385767
>seq7
Length=24649197
Score = 379 bits (420), Expect = 6e-103
Identities = 294/342 (86%), Gaps = 12/342 (4%)
Strand=Plus/Minus
Query 172 ACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCA 231
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 15305486 ACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCG 15305427
Query 232 TCGCCGGCTC-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCG 288
||||| || | ||||||||||||| ||| |||||| |||||||| || |||| | |
Sbjct 15305426 TCGCCAGCACAAAGGCCATGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGG 15305369
Query 289 AAG----GGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTA 343
|| |||| | ||||||||||||||| |||||||||| ||||||||||||| |
Sbjct 15305368 CAGAGCCCGCGTCGACCTTTTATCTAATAAATGCACCCCTTCCAGAAGTCGGGGTTTGTT 15305309
Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAAC 403
||| ||||||||||||||||||| |||||||||| ||||| || ||| |||||| ||||
Sbjct 15305308 GCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGT-AGTTACCATCAAACAAAC 15305250
Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACA 462
||||||||||||||||||||||||||||||||| || | ||| | | ||||||| |||
Sbjct 15305249 TATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTCGTTCATACTTACACA 15305190
Query 463 TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||||||
Sbjct 15305189 TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 15305148
>seq8
Length=22951293
Score = 170 bits (188), Expect = 6e-40
Identities = 120/136 (88%), Gaps = 1/136 (1%)
Strand=Plus/Minus
Query 144 GAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAG 203
|||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 15094550 GAACCCTAATTCTCCGTCACCCGTTACCACCATGGTAGGCCACTATCCTACCATCGAAAG 15094491
Query 204 TTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC-AAGGCCATGCGATTCGTTAAG 262
|||||||||||||||||||||||| | ||||| || | ||||||||||||| ||| ||
Sbjct 15094490 TTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCACAAAGGCCATGCGATCCGTCGAG 15094431
Query 263 TTATTATGAATCACCA 278
|||| |||||||| ||
Sbjct 15094430 TTATCATGAATCATCA 15094415
>seq5
Length=21221946
Score = 170 bits (188), Expect = 6e-40
Identities = 120/136 (88%), Gaps = 1/136 (1%)
Strand=Plus/Plus
Query 144 GAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAG 203
|||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 15191760 GAACCCTAATTCTCCGTCACCCGTTACCACCATGGTAGGCCACTATCCTACCATCGAAAG 15191819
Query 204 TTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC-AAGGCCATGCGATTCGTTAAG 262
|||||||||||||||||||||||| | ||||| || | ||||||||||||| ||| ||
Sbjct 15191820 TTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCACAAAGGCCATGCGATCCGTCGAG 15191879
Query 263 TTATTATGAATCACCA 278
|||| |||||||| ||
Sbjct 15191880 TTATCATGAATCATCA 15191895
>seq2
Length=19320864
Score = 170 bits (188), Expect = 6e-40
Identities = 120/136 (88%), Gaps = 1/136 (1%)
Strand=Plus/Plus
Query 144 GAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAG 203
|||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 56844 GAACCCTAATTCTCCGTCACCCGTTACCACCATGGTAGGCCACTATCCTACCATCGAAAG 56903
Query 204 TTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC-AAGGCCATGCGATTCGTTAAG 262
|||||||||||||||||||||||| | ||||| || | ||||||||||||| ||| ||
Sbjct 56904 TTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCACAAAGGCCATGCGATCCGTCGAG 56963
Query 263 TTATTATGAATCACCA 278
|||| |||||||| ||
Sbjct 56964 TTATCATGAATCATCA 56979
>seq1
Length=33132539
Score = 170 bits (188), Expect = 6e-40
Identities = 120/136 (88%), Gaps = 1/136 (1%)
Strand=Plus/Minus
Query 144 GAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAG 203
|||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 25595996 GAACCCTAATTCTCCGTCACCCGTTACCACCATGGTAGGCCACTATCCTACCATCGAAAG 25595937
Query 204 TTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC-AAGGCCATGCGATTCGTTAAG 262
|||||||||||||||||||||||| | ||||| || | ||||||||||||| ||| ||
Sbjct 25595936 TTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCACAAAGGCCATGCGATCCGTCGAG 25595877
Query 263 TTATTATGAATCACCA 278
|||| |||||||| ||
Sbjct 25595876 TTATCATGAATCATCA 25595861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510389487616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |