Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2 _202016-11-26] 696 sequences; 206,822,858 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq696 637 5e-178 seq2 551 6e-152 seq74 219 5e-52 seq1 86.0 7e-12 >seq696 Length=154923 Score = 637 bits (706), Expect = 5e-178 Identities = 721/966 (75%), Gaps = 0/966 (0%) Strand=Plus/Minus Query 159830 AACCGCCTCTATGTCGGTTGGTTCGGCGTCCTGATGATCCCAACTCTGTTGGCAGCAACT 159889 ||||| || || | || ||||| || || |||||||||| || | ||| | |||||| Sbjct 1343 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 1284 Query 159890 ATCTGCTTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAA 159949 | || || |||| ||||| |||||||| || || || || ||||| || |||||| Sbjct 1283 TCCGTTTTTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAA 1224 Query 159950 CCCGTCGCTGGTTCACTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTCT 160009 || || |||| || || | ||||| ||||| || || || ||||| || |||| || Sbjct 1223 CCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTACT 1164 Query 160010 TCCAACGCAATTGGTCTTCACTTCTATCCCATTTGGGAAGCCGCATCGCTCGACGAGTGG 160069 || || |||||| | || || || || || |||||||| ||||| | || || ||| Sbjct 1163 TCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGG 1104 Query 160070 CTCTATAACGGTGGTCCTTTCCAACTCGTAGTCTTCCACTTCCTGATCGGCATCTATGCC 160129 || || ||||||||||||| |||| | || | ||||| | | || | | Sbjct 1103 CTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGT 1044 Query 160130 TATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTT 160189 ||||||||||||||||||||||| || |||||| ||||||||||| ||||| ||| Sbjct 1043 TATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCGGTT 984 Query 160190 GCATACTCTGCTCCAGTCGCTGCTGCTTCTGCTGTATTCCTCGTCTACCCCTTCGGTCAG 160249 ||||| || ||||| || || ||||| ||||||| ||| | |||| || | |||||| Sbjct 983 GCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTATCCAATTGGTCAG 924 Query 160250 GGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTTGTA 160309 || ||| || |||| ||||||||| || |||||||||||||| |||| |||| ||||| Sbjct 923 GGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTA 864 Query 160310 TTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGGGTA 160369 ||||| || || ||||| || |||||||| || || |||||| | ||||| ||||| ||| Sbjct 863 TTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTA 804 Query 160370 TTCGGTGGATCTCTGTTCTCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAGA 160429 ||||| || || || || |||||||||||| || |||| ||||||||| | |||| Sbjct 803 TTCGGCGGCTCCCTTTTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGG 744 Query 160430 GAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAAGAGACT 160489 || || ||||||| ||| || || | ||||||| ||||| ||||| ||||| ||| Sbjct 743 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAACT 684 Query 160490 TACAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTTT 160549 |||||||| || || || || || || || || || ||||||||||||||||| || Sbjct 683 TACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTC 624 Query 160550 AACAACTCACGCTCTCTGCACTTCTTCCTCGCTGCTTGGCCTGTTGTTGGAATCTGGTTC 160609 ||||| || || ||| | || |||||| | || |||||||| || || || || ||||| Sbjct 623 AACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTT 564 Query 160610 ACTGCCCTTGGTGTTTCTACCATGGCATTCAATCTCAATGGTTTCAACTTCAACCAGTCC 160669 ||||| | ||| || ||| ||||| ||||| || ||||||||||| |||||||| || Sbjct 563 ACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCA 504 Query 160670 ATCTTGGACAACCAAGGACAAGTTCTGAACACTTGGGCAGACGTGCTTAACCGCGCTGGT 160729 | | || | ||||||| ||| | || |||||||| || | ||||||| ||| Sbjct 503 GTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAAC 444 Query 160730 CTGGGCATGGAAGTCATGCACGAGCGTAACGCTCACAACTTCCCTCTCGACCTTGCTGCT 160789 || || |||||||| ||||| || ||||| ||||||||||||||||| ||||| |||||| Sbjct 443 CTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 384 Query 160790 GCTGAG 160795 | |||| Sbjct 383 GTTGAG 378 Score = 551 bits (610), Expect = 6e-152 Identities = 722/993 (73%), Gaps = 5/993 (1%) Strand=Plus/Plus Query 161545 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCT 161604 || || ||||||||||| || |||||||| || | || ||||| ||| ||| | ||| Sbjct 32748 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 32807 Query 161605 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCT 161664 | || |||||| | || || || || || | || |||||||| |||||| | || Sbjct 32808 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 32867 Query 161665 AGTTCCTATCTTGAGGGTGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGCT 161724 ||||||||| | || ||| |||||| | || || |||||| ||||| ||| | | Sbjct 32868 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGT 32927 Query 161725 ATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTG 161783 | | |||||| || || || || ||||||||||| || ||||| ||||| | || Sbjct 32928 TTAGCGCATTCT-TTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTG 32986 Query 161784 GATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGG 161843 | ||| | || || || ||| |||||| || |||||||| |||||||| | || || Sbjct 32987 GTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGG 33046 Query 161844 ATTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCTA 161902 || ||| | ||||| |||||||||||||| ||| || | | || ||||| ||||| | Sbjct 33047 TTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAA 33105 Query 161903 TTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGAC 161962 | || ||||||||||| |||||||||||||| ||||| || || ||||| || || | Sbjct 33106 TCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTC 33165 Query 161963 AGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTT 162022 | || |||||||| ||||| ||||| || || ||||| || | ||| | || | Sbjct 33166 AATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCT 33225 Query 162023 TCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTA 162082 | | ||||| || || |||||||| | || || || || |||||||| ||||| ||| Sbjct 33226 TTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTG 33285 Query 162083 TCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACC 162142 | |||| | ||| |||| | |||||||| |||| ||||| ||||| || | | Sbjct 33286 TACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTG 33345 Query 162143 AAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTT 162202 |||||||||| |||||||| ||| |||||| || | || |||| || || |||| Sbjct 33346 AAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTT 33405 Query 162203 ACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATA 162262 | || ||||| || || ||||| || |||||||| ||||| || |||||||| |||| Sbjct 33406 ATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATA 33465 Query 162263 AGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTA 162322 | |||||||| |||||||||||| | || || || || | ||| | |||| ||| || Sbjct 33466 AACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTC 33525 Query 162323 TCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTC 162382 | || | | || || ||| | || || ||||| || ||||| || || ||||| || | Sbjct 33526 TTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCC 33585 Query 162383 GTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAG 162442 |||||||||| ||||| |||||||| || ||||| || || ||||| || || || |||| Sbjct 33586 GTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAG 33645 Query 162443 GTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGG 162502 || ||||||| ||| |||| | ||||| || ||||| ||| || |||||||||||| Sbjct 33646 GTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGG 33705 Query 162503 AAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535 | ||||| || | || ||||| || | ||||| Sbjct 33706 AGGTTCTACCACGTGGAAACGCTCT-TTAATGG 33737 >seq2 Length=19320864 Score = 551 bits (610), Expect = 6e-152 Identities = 722/993 (73%), Gaps = 5/993 (1%) Strand=Plus/Minus Query 161545 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCT 161604 || || ||||||||||| || |||||||| || | || ||||| ||| ||| | ||| Sbjct 8803654 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 8803595 Query 161605 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCT 161664 | || |||||| | || || || || || | || |||||||| |||||| | || Sbjct 8803594 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 8803535 Query 161665 AGTTCCTATCTTGAGGGTGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGCT 161724 ||||||||| | || ||| |||||| | || || |||||| ||||| ||| | | Sbjct 8803534 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGT 8803475 Query 161725 ATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTG 161783 | | |||||| || || || || ||||||||||| || ||||| ||||| | || Sbjct 8803474 TTAGCGCATTCT-TTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTG 8803416 Query 161784 GATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGG 161843 | ||| | || || || ||| |||||| || |||||||| |||||||| | || || Sbjct 8803415 GTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGG 8803356 Query 161844 ATTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCTA 161902 || ||| | ||||| |||||||||||||| ||| || | | || ||||| ||||| | Sbjct 8803355 TTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAA 8803297 Query 161903 TTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGAC 161962 | || ||||||||||| |||||||||||||| ||||| || || ||||| || || | Sbjct 8803296 TCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTC 8803237 Query 161963 AGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTT 162022 | || |||||||| ||||| ||||| || || ||||| || | ||| | || | Sbjct 8803236 AATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCT 8803177 Query 162023 TCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTA 162082 | | ||||| || || |||||||| | || || || || |||||||| ||||| ||| Sbjct 8803176 TTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTG 8803117 Query 162083 TCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACC 162142 | |||| | ||| |||| | |||||||| |||| ||||| ||||| || | | Sbjct 8803116 TACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTG 8803057 Query 162143 AAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTT 162202 |||||||||| |||||||| ||| |||||| || | || |||| || || |||| Sbjct 8803056 AAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTT 8802997 Query 162203 ACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATA 162262 | || ||||| || || ||||| || |||||||| ||||| || |||||||| |||| Sbjct 8802996 ATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATA 8802937 Query 162263 AGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTA 162322 | |||||||| |||||||||||| | || || || || | ||| | |||| ||| || Sbjct 8802936 AACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTC 8802877 Query 162323 TCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTC 162382 | || | | || || ||| | || || ||||| || ||||| || || ||||| || | Sbjct 8802876 TTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCC 8802817 Query 162383 GTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAG 162442 |||||||||| ||||| |||||||| || ||||| || || ||||| || || || |||| Sbjct 8802816 GTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAG 8802757 Query 162443 GTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGG 162502 || ||||||| ||| |||| | ||||| || ||||| ||| || |||||||||||| Sbjct 8802756 GTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGG 8802697 Query 162503 AAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535 | ||||| || | || ||||| || | ||||| Sbjct 8802696 AGGTTCTACCACGTGGAAACGCTCT-TTAATGG 8802665 Score = 547 bits (606), Expect = 7e-151 Identities = 721/993 (73%), Gaps = 5/993 (1%) Strand=Plus/Plus Query 161545 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCT 161604 || || ||||||||||| || |||||||| || | || ||||| ||| ||| | ||| Sbjct 9134825 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 9134884 Query 161605 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCT 161664 | || |||||| | || || || || || | || |||||||| |||||| | || Sbjct 9134885 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 9134944 Query 161665 AGTTCCTATCTTGAGGGTGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGCT 161724 ||||||||| | || ||| |||||| | || || |||||| ||||| ||| | | Sbjct 9134945 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGT 9135004 Query 161725 ATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTG 161783 | | |||||| || || || || ||||||||||| || ||||| ||||| | || Sbjct 9135005 TTAGCGCATTCT-TTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTG 9135063 Query 161784 GATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGG 161843 | ||| | || || || ||| |||||| || |||||||| |||||||| | || || Sbjct 9135064 GTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGG 9135123 Query 161844 ATTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCTA 161902 || ||| | ||||| |||||||||||||| ||| || | | || ||||| ||||| | Sbjct 9135124 TTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAA 9135182 Query 161903 TTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGAC 161962 | || ||||||||||| |||||||||||||| ||||| || || ||||| || || | Sbjct 9135183 TCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTC 9135242 Query 161963 AGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTT 162022 | || |||||||| ||||| ||||| || || ||||| || | ||| | || | Sbjct 9135243 AATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCT 9135302 Query 162023 TCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTA 162082 | | ||||| || || |||||||| | || || || || |||||||| ||||| ||| Sbjct 9135303 TTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTG 9135362 Query 162083 TCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACC 162142 | |||| | ||| |||| | |||||||| |||| ||||| ||||| || | | Sbjct 9135363 TACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTG 9135422 Query 162143 AAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTT 162202 |||||||||| |||||||| ||| |||||| || | || |||| || || |||| Sbjct 9135423 AAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTT 9135482 Query 162203 ACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATA 162262 | || ||||| || || ||| | || |||||||| ||||| || |||||||| |||| Sbjct 9135483 ATTCAATGGTCACCGCTAACAGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATA 9135542 Query 162263 AGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTA 162322 | |||||||| |||||||||||| | || || || || | ||| | |||| ||| || Sbjct 9135543 AACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTC 9135602 Query 162323 TCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTC 162382 | || | | || || ||| | || || ||||| || ||||| || || ||||| || | Sbjct 9135603 TTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCC 9135662 Query 162383 GTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAG 162442 |||||||||| ||||| |||||||| || ||||| || || ||||| || || || |||| Sbjct 9135663 GTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAG 9135722 Query 162443 GTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGG 162502 || ||||||| ||| |||| | ||||| || ||||| ||| || |||||||||||| Sbjct 9135723 GTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGG 9135782 Query 162503 AAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535 | ||||| || | || ||||| || | ||||| Sbjct 9135783 AGGTTCTACCACGTGGAAACGCTCT-TTAATGG 9135814 Score = 499 bits (552), Expect = 3e-136 Identities = 705/992 (71%), Gaps = 23/992 (2%) Strand=Plus/Plus Query 161545 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCT 161604 || || ||||||||||| || |||||||| || | || ||||| ||| ||| | ||| Sbjct 12218253 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 12218312 Query 161605 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCT 161664 | || |||||| | || || || || || | || |||||||| |||||| | || Sbjct 12218313 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 12218372 Query 161665 AGTTCCTATCTTGAGGGTGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGCT 161724 ||||||||| | || ||| |||||| | || || |||||| ||||| ||| Sbjct 12218373 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTA----- 12218427 Query 161725 ATGGGTCATTCTCTTCTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGG 161784 || || || ||||||||||| || ||||| ||||| | ||| Sbjct 12218428 ---------------CTCCTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGG 12218472 Query 161785 ATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGGA 161844 ||| | || || || ||| |||||| || |||||||| |||||||| | || || Sbjct 12218473 TGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGGT 12218532 Query 161845 TTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCTAT 161903 || ||| | ||||| |||||||||||||| ||| || | | || || || ||||| || Sbjct 12218533 TTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCATATAATGCAAT 12218591 Query 161904 TGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGACA 161963 || ||||||||||| |||||||||||||| ||||| || || ||||| || || || Sbjct 12218592 CGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTCA 12218651 Query 161964 GTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTTT 162023 || |||||||| ||||| ||||| || || ||||| || | ||| | || || Sbjct 12218652 ATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCTT 12218711 Query 162024 CCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTAT 162083 | ||||| || || |||||||| | || || || || |||||||| ||||| ||| | Sbjct 12218712 TTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTGT 12218771 Query 162084 CTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACCA 162143 | || | ||| |||| | |||||||| | || ||||| ||||| || | | | Sbjct 12218772 ACTTGGCGCGGCTCTGCTATGCGCTATTCATGTTGCTACTGTAGAAAATACTTTATTTGA 12218831 Query 162144 AGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTTA 162203 ||||||||| |||||||| ||| |||||| || | || |||| || || ||||| Sbjct 12218832 AGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTA 12218891 Query 162204 CTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATAA 162263 || ||||| || || ||||| || |||||||| ||||| || |||||||| ||||| Sbjct 12218892 TTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAA 12218951 Query 162264 GCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTAT 162323 |||||||| |||||||||||| | || || || || | ||| | |||| ||| || | Sbjct 12218952 ACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCT 12219011 Query 162324 CGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTCG 162383 || | | || || ||| | || || ||||| || |||||||| || |||| || | Sbjct 12219012 TGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTTGTTTCCTAGGAAATCTG 12219071 Query 162384 TGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGG 162443 ||||||||| ||||| |||||||| || ||||| || || ||||| || || || ||||| Sbjct 12219072 TGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGG 12219131 Query 162444 TCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGA 162503 | ||||||| ||| || | | ||||| || ||||| ||| || ||||||||||||| Sbjct 12219132 TATTCGTGCTTGGATGACGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGA 12219191 Query 162504 AGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535 ||||| || | || ||||| || | ||||| Sbjct 12219192 GGTTCTACCACGTGGAAACGCTCT-TTAATGG 12219222 Score = 122 bits (134), Expect = 1e-22 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 160969 TATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGTCGTGCTGGT 161028 || || |||||||| || || ||||| || | || || ||||| || ||||||||| Sbjct 2824578 TACGTTCTTGACGCGGCCGAGGAAGCTGGAATCGATTTGCCATACTCTTGCCGTGCTGGT 2824519 Query 161029 GCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCTGATCAATCT 161088 |||| || | ||||||||||| ||| | ||| |||| ||||| ||||| || | Sbjct 2824518 TCTTGTTCAAGCTGTGCTGGTAAAGTTGTGTCTGGATCTGTTGATCAGTCTGACCAGAGT 2824459 Query 161089 TTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCTTATCCCACT 161148 ||||| |||||||| || ||| ||| ||||| || || || | ||||||||| ||| Sbjct 2824458 TTCCTTGATGATGAGCAGATTGGTCAAGGGTTTGTTCTCACTTGTGCTGCTTATCCTACT 2824399 Query 161149 TCTGATGTAACTATT 161163 |||||||| || ||| Sbjct 2824398 TCTGATGTTACCATT 2824384 >seq74 Length=21493 Score = 219 bits (242), Expect = 5e-52 Identities = 275/379 (73%), Gaps = 9/379 (2%) Strand=Plus/Minus Query 160417 TAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCA 160476 |||| | |||| || || | ||||| ||| || || | ||||||| |||||||| Sbjct 11046 TAGTTTGATCAGGGAAACCATAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCA 10987 Query 160477 AGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCA 160536 ||| ||| | ||||||||||| || || || ||||| || || || || |||||||||| Sbjct 10986 AGAAGAATAAACTTACAACATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCG 10927 Query 160537 ATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGCTGCTTGGCCTGTTGT 160596 | | ||||| || || ||| | || |||||| | || |||||||| || || Sbjct 10926 TT---------TCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGT 10876 Query 160597 TGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAATCTCAATGGTTTCAA 160656 || || ||||| ||||| | ||| || || ||||| ||||| || ||||||||||| Sbjct 10875 AGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAA 10816 Query 160657 CTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACACTTGGGCAGACGTGCT 160716 |||||||| || | | || | ||||| | ||| | || |||||||| || | | Sbjct 10815 TTTCAACCAATCAGTAGTTGATAGTCAAGGGCGTGTTATTAATACTTGGGCTGATATTAT 10756 Query 160717 TAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGCTCACAACTTCCCTCT 160776 |||||| || | || |||||||| ||||| || ||||| ||||||||||||||||| Sbjct 10755 TAACCGTACTAACTTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCT 10696 Query 160777 CGACCTTGCTGCTGCTGAG 160795 ||||| ||||||| |||| Sbjct 10695 AGACCTAGCTGCTGTTGAG 10677 >seq1 Length=33132539 Score = 86.0 bits (94), Expect = 7e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 160972 GTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGTCGTGCTGGTGCT 161031 ||||| ||||||||||| ||||| || ||||| || ||||| || ||||| ||| || Sbjct 4367182 GTCCTCGACGCTGCTGAGGAAGCCGGAATTGACTTGCCGTACTCATGCCGTGCCGGTTCT 4367241 Query 161032 TGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCTGATCAATCTTTC 161091 ||||| | ||| || || || | | ||| || | || || || || || ||| Sbjct 4367242 TGCTCAAGTTGCGCCGGGAAAGTCGTCTCTGGCTCTATTGACCAGTCGGACCAGAGCTTC 4367301 Query 161092 CTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCTTATCCCACTTCT 161151 | || ||||| || | ||| | |||| ||||||| || |||||||| |||||| Sbjct 4367302 TTAGACGATGAACAGATCAGCGAAGGCTATGTCTTGACCTGTGTGGCTTATCCGACTTCT 4367361 Query 161152 GATGT 161156 ||||| Sbjct 4367362 GATGT 4367366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551371203028800