Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_031903.1
Length=172345
Score E
Sequences producing significant alignments: (Bits) Value
seq696 637 5e-178
seq2 551 6e-152
seq74 219 5e-52
seq1 86.0 7e-12
>seq696
Length=154923
Score = 637 bits (706), Expect = 5e-178
Identities = 721/966 (75%), Gaps = 0/966 (0%)
Strand=Plus/Minus
Query 159830 AACCGCCTCTATGTCGGTTGGTTCGGCGTCCTGATGATCCCAACTCTGTTGGCAGCAACT 159889
||||| || || | || ||||| || || |||||||||| || | ||| | ||||||
Sbjct 1343 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 1284
Query 159890 ATCTGCTTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAA 159949
| || || |||| ||||| |||||||| || || || || ||||| || ||||||
Sbjct 1283 TCCGTTTTTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAA 1224
Query 159950 CCCGTCGCTGGTTCACTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTCT 160009
|| || |||| || || | ||||| ||||| || || || ||||| || |||| ||
Sbjct 1223 CCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTACT 1164
Query 160010 TCCAACGCAATTGGTCTTCACTTCTATCCCATTTGGGAAGCCGCATCGCTCGACGAGTGG 160069
|| || |||||| | || || || || || |||||||| ||||| | || || |||
Sbjct 1163 TCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGG 1104
Query 160070 CTCTATAACGGTGGTCCTTTCCAACTCGTAGTCTTCCACTTCCTGATCGGCATCTATGCC 160129
|| || ||||||||||||| |||| | || | ||||| | | || | |
Sbjct 1103 CTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGT 1044
Query 160130 TATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTT 160189
||||||||||||||||||||||| || |||||| ||||||||||| ||||| |||
Sbjct 1043 TATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCGGTT 984
Query 160190 GCATACTCTGCTCCAGTCGCTGCTGCTTCTGCTGTATTCCTCGTCTACCCCTTCGGTCAG 160249
||||| || ||||| || || ||||| ||||||| ||| | |||| || | ||||||
Sbjct 983 GCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTATCCAATTGGTCAG 924
Query 160250 GGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTTGTA 160309
|| ||| || |||| ||||||||| || |||||||||||||| |||| |||| |||||
Sbjct 923 GGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTA 864
Query 160310 TTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGGGTA 160369
||||| || || ||||| || |||||||| || || |||||| | ||||| ||||| |||
Sbjct 863 TTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTA 804
Query 160370 TTCGGTGGATCTCTGTTCTCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAGA 160429
||||| || || || || |||||||||||| || |||| ||||||||| | ||||
Sbjct 803 TTCGGCGGCTCCCTTTTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGG 744
Query 160430 GAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAAGAGACT 160489
|| || ||||||| ||| || || | ||||||| ||||| ||||| ||||| |||
Sbjct 743 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAACT 684
Query 160490 TACAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTTT 160549
|||||||| || || || || || || || || || ||||||||||||||||| ||
Sbjct 683 TACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTC 624
Query 160550 AACAACTCACGCTCTCTGCACTTCTTCCTCGCTGCTTGGCCTGTTGTTGGAATCTGGTTC 160609
||||| || || ||| | || |||||| | || |||||||| || || || || |||||
Sbjct 623 AACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTT 564
Query 160610 ACTGCCCTTGGTGTTTCTACCATGGCATTCAATCTCAATGGTTTCAACTTCAACCAGTCC 160669
||||| | ||| || ||| ||||| ||||| || ||||||||||| |||||||| ||
Sbjct 563 ACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCA 504
Query 160670 ATCTTGGACAACCAAGGACAAGTTCTGAACACTTGGGCAGACGTGCTTAACCGCGCTGGT 160729
| | || | ||||||| ||| | || |||||||| || | ||||||| |||
Sbjct 503 GTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAAC 444
Query 160730 CTGGGCATGGAAGTCATGCACGAGCGTAACGCTCACAACTTCCCTCTCGACCTTGCTGCT 160789
|| || |||||||| ||||| || ||||| ||||||||||||||||| ||||| ||||||
Sbjct 443 CTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 384
Query 160790 GCTGAG 160795
| ||||
Sbjct 383 GTTGAG 378
Score = 551 bits (610), Expect = 6e-152
Identities = 722/993 (73%), Gaps = 5/993 (1%)
Strand=Plus/Plus
Query 161545 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCT 161604
|| || ||||||||||| || |||||||| || | || ||||| ||| ||| | |||
Sbjct 32748 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 32807
Query 161605 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCT 161664
| || |||||| | || || || || || | || |||||||| |||||| | ||
Sbjct 32808 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 32867
Query 161665 AGTTCCTATCTTGAGGGTGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGCT 161724
||||||||| | || ||| |||||| | || || |||||| ||||| ||| | |
Sbjct 32868 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGT 32927
Query 161725 ATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTG 161783
| | |||||| || || || || ||||||||||| || ||||| ||||| | ||
Sbjct 32928 TTAGCGCATTCT-TTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTG 32986
Query 161784 GATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGG 161843
| ||| | || || || ||| |||||| || |||||||| |||||||| | || ||
Sbjct 32987 GTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGG 33046
Query 161844 ATTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCTA 161902
|| ||| | ||||| |||||||||||||| ||| || | | || ||||| ||||| |
Sbjct 33047 TTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAA 33105
Query 161903 TTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGAC 161962
| || ||||||||||| |||||||||||||| ||||| || || ||||| || || |
Sbjct 33106 TCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTC 33165
Query 161963 AGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTT 162022
| || |||||||| ||||| ||||| || || ||||| || | ||| | || |
Sbjct 33166 AATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCT 33225
Query 162023 TCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTA 162082
| | ||||| || || |||||||| | || || || || |||||||| ||||| |||
Sbjct 33226 TTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTG 33285
Query 162083 TCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACC 162142
| |||| | ||| |||| | |||||||| |||| ||||| ||||| || | |
Sbjct 33286 TACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTG 33345
Query 162143 AAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTT 162202
|||||||||| |||||||| ||| |||||| || | || |||| || || ||||
Sbjct 33346 AAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTT 33405
Query 162203 ACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATA 162262
| || ||||| || || ||||| || |||||||| ||||| || |||||||| ||||
Sbjct 33406 ATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATA 33465
Query 162263 AGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTA 162322
| |||||||| |||||||||||| | || || || || | ||| | |||| ||| ||
Sbjct 33466 AACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTC 33525
Query 162323 TCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTC 162382
| || | | || || ||| | || || ||||| || ||||| || || ||||| || |
Sbjct 33526 TTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCC 33585
Query 162383 GTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAG 162442
|||||||||| ||||| |||||||| || ||||| || || ||||| || || || ||||
Sbjct 33586 GTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAG 33645
Query 162443 GTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGG 162502
|| ||||||| ||| |||| | ||||| || ||||| ||| || ||||||||||||
Sbjct 33646 GTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGG 33705
Query 162503 AAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535
| ||||| || | || ||||| || | |||||
Sbjct 33706 AGGTTCTACCACGTGGAAACGCTCT-TTAATGG 33737
>seq2
Length=19320864
Score = 551 bits (610), Expect = 6e-152
Identities = 722/993 (73%), Gaps = 5/993 (1%)
Strand=Plus/Minus
Query 161545 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCT 161604
|| || ||||||||||| || |||||||| || | || ||||| ||| ||| | |||
Sbjct 8803654 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 8803595
Query 161605 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCT 161664
| || |||||| | || || || || || | || |||||||| |||||| | ||
Sbjct 8803594 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 8803535
Query 161665 AGTTCCTATCTTGAGGGTGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGCT 161724
||||||||| | || ||| |||||| | || || |||||| ||||| ||| | |
Sbjct 8803534 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGT 8803475
Query 161725 ATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTG 161783
| | |||||| || || || || ||||||||||| || ||||| ||||| | ||
Sbjct 8803474 TTAGCGCATTCT-TTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTG 8803416
Query 161784 GATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGG 161843
| ||| | || || || ||| |||||| || |||||||| |||||||| | || ||
Sbjct 8803415 GTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGG 8803356
Query 161844 ATTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCTA 161902
|| ||| | ||||| |||||||||||||| ||| || | | || ||||| ||||| |
Sbjct 8803355 TTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAA 8803297
Query 161903 TTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGAC 161962
| || ||||||||||| |||||||||||||| ||||| || || ||||| || || |
Sbjct 8803296 TCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTC 8803237
Query 161963 AGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTT 162022
| || |||||||| ||||| ||||| || || ||||| || | ||| | || |
Sbjct 8803236 AATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCT 8803177
Query 162023 TCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTA 162082
| | ||||| || || |||||||| | || || || || |||||||| ||||| |||
Sbjct 8803176 TTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTG 8803117
Query 162083 TCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACC 162142
| |||| | ||| |||| | |||||||| |||| ||||| ||||| || | |
Sbjct 8803116 TACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTG 8803057
Query 162143 AAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTT 162202
|||||||||| |||||||| ||| |||||| || | || |||| || || ||||
Sbjct 8803056 AAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTT 8802997
Query 162203 ACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATA 162262
| || ||||| || || ||||| || |||||||| ||||| || |||||||| ||||
Sbjct 8802996 ATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATA 8802937
Query 162263 AGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTA 162322
| |||||||| |||||||||||| | || || || || | ||| | |||| ||| ||
Sbjct 8802936 AACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTC 8802877
Query 162323 TCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTC 162382
| || | | || || ||| | || || ||||| || ||||| || || ||||| || |
Sbjct 8802876 TTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCC 8802817
Query 162383 GTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAG 162442
|||||||||| ||||| |||||||| || ||||| || || ||||| || || || ||||
Sbjct 8802816 GTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAG 8802757
Query 162443 GTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGG 162502
|| ||||||| ||| |||| | ||||| || ||||| ||| || ||||||||||||
Sbjct 8802756 GTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGG 8802697
Query 162503 AAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535
| ||||| || | || ||||| || | |||||
Sbjct 8802696 AGGTTCTACCACGTGGAAACGCTCT-TTAATGG 8802665
Score = 547 bits (606), Expect = 7e-151
Identities = 721/993 (73%), Gaps = 5/993 (1%)
Strand=Plus/Plus
Query 161545 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCT 161604
|| || ||||||||||| || |||||||| || | || ||||| ||| ||| | |||
Sbjct 9134825 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 9134884
Query 161605 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCT 161664
| || |||||| | || || || || || | || |||||||| |||||| | ||
Sbjct 9134885 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 9134944
Query 161665 AGTTCCTATCTTGAGGGTGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGCT 161724
||||||||| | || ||| |||||| | || || |||||| ||||| ||| | |
Sbjct 9134945 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGT 9135004
Query 161725 ATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTG 161783
| | |||||| || || || || ||||||||||| || ||||| ||||| | ||
Sbjct 9135005 TTAGCGCATTCT-TTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTG 9135063
Query 161784 GATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGG 161843
| ||| | || || || ||| |||||| || |||||||| |||||||| | || ||
Sbjct 9135064 GTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGG 9135123
Query 161844 ATTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCTA 161902
|| ||| | ||||| |||||||||||||| ||| || | | || ||||| ||||| |
Sbjct 9135124 TTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAA 9135182
Query 161903 TTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGAC 161962
| || ||||||||||| |||||||||||||| ||||| || || ||||| || || |
Sbjct 9135183 TCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTC 9135242
Query 161963 AGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTT 162022
| || |||||||| ||||| ||||| || || ||||| || | ||| | || |
Sbjct 9135243 AATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCT 9135302
Query 162023 TCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTA 162082
| | ||||| || || |||||||| | || || || || |||||||| ||||| |||
Sbjct 9135303 TTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTG 9135362
Query 162083 TCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACC 162142
| |||| | ||| |||| | |||||||| |||| ||||| ||||| || | |
Sbjct 9135363 TACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTG 9135422
Query 162143 AAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTT 162202
|||||||||| |||||||| ||| |||||| || | || |||| || || ||||
Sbjct 9135423 AAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTT 9135482
Query 162203 ACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATA 162262
| || ||||| || || ||| | || |||||||| ||||| || |||||||| ||||
Sbjct 9135483 ATTCAATGGTCACCGCTAACAGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATA 9135542
Query 162263 AGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTA 162322
| |||||||| |||||||||||| | || || || || | ||| | |||| ||| ||
Sbjct 9135543 AACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTC 9135602
Query 162323 TCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTC 162382
| || | | || || ||| | || || ||||| || ||||| || || ||||| || |
Sbjct 9135603 TTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCC 9135662
Query 162383 GTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAG 162442
|||||||||| ||||| |||||||| || ||||| || || ||||| || || || ||||
Sbjct 9135663 GTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAG 9135722
Query 162443 GTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGG 162502
|| ||||||| ||| |||| | ||||| || ||||| ||| || ||||||||||||
Sbjct 9135723 GTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGG 9135782
Query 162503 AAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535
| ||||| || | || ||||| || | |||||
Sbjct 9135783 AGGTTCTACCACGTGGAAACGCTCT-TTAATGG 9135814
Score = 499 bits (552), Expect = 3e-136
Identities = 705/992 (71%), Gaps = 23/992 (2%)
Strand=Plus/Plus
Query 161545 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCT 161604
|| || ||||||||||| || |||||||| || | || ||||| ||| ||| | |||
Sbjct 12218253 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 12218312
Query 161605 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCT 161664
| || |||||| | || || || || || | || |||||||| |||||| | ||
Sbjct 12218313 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 12218372
Query 161665 AGTTCCTATCTTGAGGGTGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGCT 161724
||||||||| | || ||| |||||| | || || |||||| ||||| |||
Sbjct 12218373 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTA----- 12218427
Query 161725 ATGGGTCATTCTCTTCTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGG 161784
|| || || ||||||||||| || ||||| ||||| | |||
Sbjct 12218428 ---------------CTCCTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGG 12218472
Query 161785 ATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGGA 161844
||| | || || || ||| |||||| || |||||||| |||||||| | || ||
Sbjct 12218473 TGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGGT 12218532
Query 161845 TTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCTAT 161903
|| ||| | ||||| |||||||||||||| ||| || | | || || || ||||| ||
Sbjct 12218533 TTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCATATAATGCAAT 12218591
Query 161904 TGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGACA 161963
|| ||||||||||| |||||||||||||| ||||| || || ||||| || || ||
Sbjct 12218592 CGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTCA 12218651
Query 161964 GTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTTT 162023
|| |||||||| ||||| ||||| || || ||||| || | ||| | || ||
Sbjct 12218652 ATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCTT 12218711
Query 162024 CCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTAT 162083
| ||||| || || |||||||| | || || || || |||||||| ||||| ||| |
Sbjct 12218712 TTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTGT 12218771
Query 162084 CTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACCA 162143
| || | ||| |||| | |||||||| | || ||||| ||||| || | | |
Sbjct 12218772 ACTTGGCGCGGCTCTGCTATGCGCTATTCATGTTGCTACTGTAGAAAATACTTTATTTGA 12218831
Query 162144 AGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTTA 162203
||||||||| |||||||| ||| |||||| || | || |||| || || |||||
Sbjct 12218832 AGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTA 12218891
Query 162204 CTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATAA 162263
|| ||||| || || ||||| || |||||||| ||||| || |||||||| |||||
Sbjct 12218892 TTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAA 12218951
Query 162264 GCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTAT 162323
|||||||| |||||||||||| | || || || || | ||| | |||| ||| || |
Sbjct 12218952 ACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCT 12219011
Query 162324 CGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTCG 162383
|| | | || || ||| | || || ||||| || |||||||| || |||| || |
Sbjct 12219012 TGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTTGTTTCCTAGGAAATCTG 12219071
Query 162384 TGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGG 162443
||||||||| ||||| |||||||| || ||||| || || ||||| || || || |||||
Sbjct 12219072 TGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGG 12219131
Query 162444 TCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGA 162503
| ||||||| ||| || | | ||||| || ||||| ||| || |||||||||||||
Sbjct 12219132 TATTCGTGCTTGGATGACGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGA 12219191
Query 162504 AGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535
||||| || | || ||||| || | |||||
Sbjct 12219192 GGTTCTACCACGTGGAAACGCTCT-TTAATGG 12219222
Score = 122 bits (134), Expect = 1e-22
Identities = 144/195 (74%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 160969 TATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGTCGTGCTGGT 161028
|| || |||||||| || || ||||| || | || || ||||| || |||||||||
Sbjct 2824578 TACGTTCTTGACGCGGCCGAGGAAGCTGGAATCGATTTGCCATACTCTTGCCGTGCTGGT 2824519
Query 161029 GCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCTGATCAATCT 161088
|||| || | ||||||||||| ||| | ||| |||| ||||| ||||| || |
Sbjct 2824518 TCTTGTTCAAGCTGTGCTGGTAAAGTTGTGTCTGGATCTGTTGATCAGTCTGACCAGAGT 2824459
Query 161089 TTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCTTATCCCACT 161148
||||| |||||||| || ||| ||| ||||| || || || | ||||||||| |||
Sbjct 2824458 TTCCTTGATGATGAGCAGATTGGTCAAGGGTTTGTTCTCACTTGTGCTGCTTATCCTACT 2824399
Query 161149 TCTGATGTAACTATT 161163
|||||||| || |||
Sbjct 2824398 TCTGATGTTACCATT 2824384
>seq74
Length=21493
Score = 219 bits (242), Expect = 5e-52
Identities = 275/379 (73%), Gaps = 9/379 (2%)
Strand=Plus/Minus
Query 160417 TAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCA 160476
|||| | |||| || || | ||||| ||| || || | ||||||| ||||||||
Sbjct 11046 TAGTTTGATCAGGGAAACCATAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCA 10987
Query 160477 AGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCA 160536
||| ||| | ||||||||||| || || || ||||| || || || || ||||||||||
Sbjct 10986 AGAAGAATAAACTTACAACATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCG 10927
Query 160537 ATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGCTGCTTGGCCTGTTGT 160596
| | ||||| || || ||| | || |||||| | || |||||||| || ||
Sbjct 10926 TT---------TCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGT 10876
Query 160597 TGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAATCTCAATGGTTTCAA 160656
|| || ||||| ||||| | ||| || || ||||| ||||| || |||||||||||
Sbjct 10875 AGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAA 10816
Query 160657 CTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACACTTGGGCAGACGTGCT 160716
|||||||| || | | || | ||||| | ||| | || |||||||| || | |
Sbjct 10815 TTTCAACCAATCAGTAGTTGATAGTCAAGGGCGTGTTATTAATACTTGGGCTGATATTAT 10756
Query 160717 TAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGCTCACAACTTCCCTCT 160776
|||||| || | || |||||||| ||||| || ||||| |||||||||||||||||
Sbjct 10755 TAACCGTACTAACTTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCT 10696
Query 160777 CGACCTTGCTGCTGCTGAG 160795
||||| ||||||| ||||
Sbjct 10695 AGACCTAGCTGCTGTTGAG 10677
>seq1
Length=33132539
Score = 86.0 bits (94), Expect = 7e-12
Identities = 130/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 160972 GTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGTCGTGCTGGTGCT 161031
||||| ||||||||||| ||||| || ||||| || ||||| || ||||| ||| ||
Sbjct 4367182 GTCCTCGACGCTGCTGAGGAAGCCGGAATTGACTTGCCGTACTCATGCCGTGCCGGTTCT 4367241
Query 161032 TGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCTGATCAATCTTTC 161091
||||| | ||| || || || | | ||| || | || || || || || |||
Sbjct 4367242 TGCTCAAGTTGCGCCGGGAAAGTCGTCTCTGGCTCTATTGACCAGTCGGACCAGAGCTTC 4367301
Query 161092 CTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCTTATCCCACTTCT 161151
| || ||||| || | ||| | |||| ||||||| || |||||||| ||||||
Sbjct 4367302 TTAGACGATGAACAGATCAGCGAAGGCTATGTCTTGACCTGTGTGGCTTATCCGACTTCT 4367361
Query 161152 GATGT 161156
|||||
Sbjct 4367362 GATGT 4367366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 551371203028800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |