Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_031922.1
Length=174830
Score E
Sequences producing significant alignments: (Bits) Value
seq696 686 0.0
seq2 542 3e-149
seq74 241 1e-58
>seq696
Length=154923
Score = 686 bits (760), Expect = 0.0
Identities = 734/967 (76%), Gaps = 2/967 (0%)
Strand=Plus/Minus
Query 160599 AATCGTCTTTACGTCGGTTGGTTCGGTGTGCTGATGATCCCAACTCTGTTGGCAGCAACC 160658
|| ||||||||| | || ||||| ||||| |||||||||| || | ||| | |||||
Sbjct 1343 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 1284
Query 160659 GTCTGCTTTATTACTGCGTTCGTTGCTGCTCCCCCCGTGGACATCGACGGTATCCGTGAA 160718
| ||||||| || ||| |||||||||| || || || || || ||||| ||||||
Sbjct 1283 TCCGTTTTTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAA 1224
Query 160719 CCCGTTGCTGGTTCACTGATGTATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTTCT 160778
|| ||| |||| || || | || |||||||| || || || ||||| || ||||| ||
Sbjct 1223 CCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTACT 1164
Query 160779 TCCAACGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCTGCATCTCTTGATGAATGG 160838
|| || |||||| | || || ||||| || |||||||||||||| |||||||||||
Sbjct 1163 TCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGG 1104
Query 160839 CTCTACAATGGTGGTCCTTACCAACTGGTCGTATTTCACTTCCTGATCGGCATCTTCTGC 160898
|| ||||| ||||||||||| |||| | || | ||||| | | || | ||
Sbjct 1103 CTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGT 1044
Query 160899 TACATGGGTCGCGAGTGGGAACTTTCCTACCGCCTCGGCATGCGCCCCTGGATCTGCG-T 160957
|| |||||||| |||||||||||| | ||| || || ||||| || ||||| |||| |
Sbjct 1043 TATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGAT-TGCGGT 985
Query 160958 TGCATATTCTGCACCTGTTGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCA 161017
||||||||| || |||||||| ||||||| ||| || ||| | ||||||| | |||||
Sbjct 984 TGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTATCCAATTGGTCA 925
Query 161018 AGGTTCTTTCTCTGATGGTATGCCCCTGGGTATCTCTGGTACCTTCAACTTCATGCTTGT 161077
|| ||| |||||||||||||| || || ||||||||||| |||||||| ||| ||||
Sbjct 924 GGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGT 865
Query 161078 CTTCCAGGCAGAACACAACATCCTGATGCACCCCTTCCACATGTTGGGTGTTGCTGGTGT 161137
|||||||| || |||||||| || |||||||| || |||||||| ||||| ||||||||
Sbjct 864 ATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 805
Query 161138 CTTCGGTGGTTCTCTGTTCTCCGCAATGCATGGTTCACTGGTTACTTCTTCCCTGGTTCG 161197
||||| || || || || || ||||||||||| |||| |||||| || | |
Sbjct 804 ATTCGGCGGCTCCCTTTTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAG 745
Query 161198 TGAAACCACTGAGAACGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGAC 161257
|||||||| || || || || || | ||||||| || || ||||||||||| ||
Sbjct 744 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAAC 685
Query 161258 CTACAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTT 161317
|||||||| || |||||||| ||||| || || || ||||||||||||| ||| ||
Sbjct 684 TTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 625
Query 161318 CAACAACTCCCGTTCGTTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTT 161377
|||||| || ||||| || || |||||| | || || ||||| || || ||||| |||||
Sbjct 624 CAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTT 565
Query 161378 CACTGCACTTGGTGTCTCCACCATGGCATTCAACCTGAACGGATTCAACTTCAACCAGTC 161437
||||| | ||| | || ||||| |||||||| || || ||||| |||||||| ||
Sbjct 564 TACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATC 505
Query 161438 CATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCTGACGTTCTGAATCGTGCTAA 161497
| | ||| |||| || || | || || |||||||| || | || ||||||||
Sbjct 504 AGTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAA 445
Query 161498 CCTTGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTCTGGATCTCGCTGC 161557
||||||||||||||| ||||| || ||||||||||||||||||||||| || || |||||
Sbjct 444 CCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGC 385
Query 161558 TGCTGAG 161564
|| ||||
Sbjct 384 TGTTGAG 378
Score = 542 bits (600), Expect = 3e-149
Identities = 717/991 (72%), Gaps = 8/991 (1%)
Strand=Plus/Plus
Query 163917 GATCGCTTTGTCTTTGTGGGTTGGTCTGGATTACTTCTTTTTCCCACTGCTTATCTTGCA 163976
|| ||||| || ||||| ||||||||||| || | || ||||| ||| ||| | ||
Sbjct 32748 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 32807
Query 163977 ATTGGTGGCTGGCTTACTGGTACAACGTTTGTTACCAGTTGGTACACCCACGGTCTCGC- 164035
| || || ||| | || |||||||| ||||| || ||||| || || || | ||
Sbjct 32808 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 32867
Query 164036 -GT--CTAGTTACCTTGAGGGTGCTAATTTCCTTACAGCGGCTGTGTCAACGCCTGCTGA 164092
|| ||| ||| ||| ||| ||||| | || || || || || || |||||| |
Sbjct 32868 AGTTCCTATTTAGA---AGGTTGC-AATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAA 32923
Query 164093 TGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGGACTTCATTAG 164152
| | | | |||||| | | |||| ||||||||||| | || || || || | | |
Sbjct 32924 TAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCG 32983
Query 164153 GTGGTGCCAACTTGGGGGACTCTGGGCTTTTGTGGCGTTCCACGGATCTTTCGCTCTGAT 164212
||||| ||| | || || || ||||||||||| || ||||||| ||||||| | ||
Sbjct 32984 TTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAAT 33043
Query 164213 CGGTTTCATGCTTCGGCAGTTTGAAATTGCACGTCTTGTAGGTATCCGTCCGTACAATGC 164272
||||| ||| | || || |||||| |||| || ||| | || || || |||||
Sbjct 33044 AGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGC 33103
Query 164273 TATTGCGTTCTCTGGTCCGATTGCTGTCTTTGTCAGCGTTTTCCTTATGTACCCTCTCGG 164332
|| || ||||||||||| |||||||| ||||| || ||||| || || || || ||
Sbjct 33104 AATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGG 33163
Query 164333 GCAATCTAGTTGGTTCTTTGCCCCCTCGTTTGGGGTCGCGGCGATCTTCAGATTCCTCTT 164392
|||||| ||||||||||||| || ||||| || ||||| || || ||||| || |
Sbjct 33164 TCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCT 33223
Query 164393 GTTCCTCCAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCAGG 164452
|| ||||||| || ||||| |||||| | ||||| || ||||||||||| || || ||
Sbjct 33224 CTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGG 33283
Query 164453 CATCCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGTT 164512
| || || | ||||| || || ||||||||||||||||| ||||| |||||||| ||
Sbjct 33284 TGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATT 33343
Query 164513 TGAAGATGGTGAACAATCAAATACTTTCAAGGCATTCGAGCCTACTCAAGAGGAAGAGAC 164572
|||||||||||| ||||||| ||| || || | || ||||||| ||||| ||
Sbjct 33344 TGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAAC 33403
Query 164573 TTACTCGATGGTCACTGCCAACCGCTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAA 164632
||| || |||||||| || |||||||| ||||| || || ||||| ||||||| |||
Sbjct 33404 TTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAA 33463
Query 164633 TAAGCGTTGGTTGCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTC 164692
||| |||||||| || ||||||||| | ||||| || || | || | |||| ||| |
Sbjct 33464 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGC 33523
Query 164693 TATTGGTATCATCGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGAT 164752
| |||| | ||||||| || | || || ||||| ||||| || || || ||||| ||
Sbjct 33524 TCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAAT 33583
Query 164753 TAGAGCAGCAGAGGATCCTGAATTTGAGACGTTCTATACGAAGAACATCCTCCTCAATGA 164812
| ||||| || ||||| ||||||||||| |||||||| || || || || | || ||
Sbjct 33584 CCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGA 33643
Query 164813 AGGACTCCGTGCCTGGATGGCTCCAGTAGACCAGCCACACGAATCGTTTGTATTTCCAGA 164872
||| | ||||| |||||||| | ||| ||||| || ||| || |||| || ||
Sbjct 33644 AGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGA 33703
Query 164873 GGAAGTTCTTCCGAGAGGTAACGCACTCTAA 164903
||| ||||| || | || ||||| || |||
Sbjct 33704 GGAGGTTCTACCACGTGGAAACGCTCTTTAA 33734
>seq2
Length=19320864
Score = 542 bits (600), Expect = 3e-149
Identities = 717/991 (72%), Gaps = 8/991 (1%)
Strand=Plus/Minus
Query 163917 GATCGCTTTGTCTTTGTGGGTTGGTCTGGATTACTTCTTTTTCCCACTGCTTATCTTGCA 163976
|| ||||| || ||||| ||||||||||| || | || ||||| ||| ||| | ||
Sbjct 8803654 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 8803595
Query 163977 ATTGGTGGCTGGCTTACTGGTACAACGTTTGTTACCAGTTGGTACACCCACGGTCTCGC- 164035
| || || ||| | || |||||||| ||||| || ||||| || || || | ||
Sbjct 8803594 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 8803535
Query 164036 -GT--CTAGTTACCTTGAGGGTGCTAATTTCCTTACAGCGGCTGTGTCAACGCCTGCTGA 164092
|| ||| ||| ||| ||| ||||| | || || || || || || |||||| |
Sbjct 8803534 AGTTCCTATTTAGA---AGGTTGC-AATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAA 8803479
Query 164093 TGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGGACTTCATTAG 164152
| | | | |||||| | | |||| ||||||||||| | || || || || | | |
Sbjct 8803478 TAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCG 8803419
Query 164153 GTGGTGCCAACTTGGGGGACTCTGGGCTTTTGTGGCGTTCCACGGATCTTTCGCTCTGAT 164212
||||| ||| | || || || ||||||||||| || ||||||| ||||||| | ||
Sbjct 8803418 TTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAAT 8803359
Query 164213 CGGTTTCATGCTTCGGCAGTTTGAAATTGCACGTCTTGTAGGTATCCGTCCGTACAATGC 164272
||||| ||| | || || |||||| |||| || ||| | || || || |||||
Sbjct 8803358 AGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGC 8803299
Query 164273 TATTGCGTTCTCTGGTCCGATTGCTGTCTTTGTCAGCGTTTTCCTTATGTACCCTCTCGG 164332
|| || ||||||||||| |||||||| ||||| || ||||| || || || || ||
Sbjct 8803298 AATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGG 8803239
Query 164333 GCAATCTAGTTGGTTCTTTGCCCCCTCGTTTGGGGTCGCGGCGATCTTCAGATTCCTCTT 164392
|||||| ||||||||||||| || ||||| || ||||| || || ||||| || |
Sbjct 8803238 TCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCT 8803179
Query 164393 GTTCCTCCAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCAGG 164452
|| ||||||| || ||||| |||||| | ||||| || ||||||||||| || || ||
Sbjct 8803178 CTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGG 8803119
Query 164453 CATCCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGTT 164512
| || || | ||||| || || ||||||||||||||||| ||||| |||||||| ||
Sbjct 8803118 TGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATT 8803059
Query 164513 TGAAGATGGTGAACAATCAAATACTTTCAAGGCATTCGAGCCTACTCAAGAGGAAGAGAC 164572
|||||||||||| ||||||| ||| || || | || ||||||| ||||| ||
Sbjct 8803058 TGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAAC 8802999
Query 164573 TTACTCGATGGTCACTGCCAACCGCTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAA 164632
||| || |||||||| || |||||||| ||||| || || ||||| ||||||| |||
Sbjct 8802998 TTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAA 8802939
Query 164633 TAAGCGTTGGTTGCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTC 164692
||| |||||||| || ||||||||| | ||||| || || | || | |||| ||| |
Sbjct 8802938 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGC 8802879
Query 164693 TATTGGTATCATCGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGAT 164752
| |||| | ||||||| || | || || ||||| ||||| || || || ||||| ||
Sbjct 8802878 TCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAAT 8802819
Query 164753 TAGAGCAGCAGAGGATCCTGAATTTGAGACGTTCTATACGAAGAACATCCTCCTCAATGA 164812
| ||||| || ||||| ||||||||||| |||||||| || || || || | || ||
Sbjct 8802818 CCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGA 8802759
Query 164813 AGGACTCCGTGCCTGGATGGCTCCAGTAGACCAGCCACACGAATCGTTTGTATTTCCAGA 164872
||| | ||||| |||||||| | ||| ||||| || ||| || |||| || ||
Sbjct 8802758 AGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGA 8802699
Query 164873 GGAAGTTCTTCCGAGAGGTAACGCACTCTAA 164903
||| ||||| || | || ||||| || |||
Sbjct 8802698 GGAGGTTCTACCACGTGGAAACGCTCTTTAA 8802668
Score = 536 bits (594), Expect = 1e-147
Identities = 716/991 (72%), Gaps = 8/991 (1%)
Strand=Plus/Plus
Query 163917 GATCGCTTTGTCTTTGTGGGTTGGTCTGGATTACTTCTTTTTCCCACTGCTTATCTTGCA 163976
|| ||||| || ||||| ||||||||||| || | || ||||| ||| ||| | ||
Sbjct 9134825 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 9134884
Query 163977 ATTGGTGGCTGGCTTACTGGTACAACGTTTGTTACCAGTTGGTACACCCACGGTCTCGC- 164035
| || || ||| | || |||||||| ||||| || ||||| || || || | ||
Sbjct 9134885 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 9134944
Query 164036 -GT--CTAGTTACCTTGAGGGTGCTAATTTCCTTACAGCGGCTGTGTCAACGCCTGCTGA 164092
|| ||| ||| ||| ||| ||||| | || || || || || || |||||| |
Sbjct 9134945 AGTTCCTATTTAGA---AGGTTGC-AATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAA 9135000
Query 164093 TGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGGACTTCATTAG 164152
| | | | |||||| | | |||| ||||||||||| | || || || || | | |
Sbjct 9135001 TAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCG 9135060
Query 164153 GTGGTGCCAACTTGGGGGACTCTGGGCTTTTGTGGCGTTCCACGGATCTTTCGCTCTGAT 164212
||||| ||| | || || || ||||||||||| || ||||||| ||||||| | ||
Sbjct 9135061 TTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAAT 9135120
Query 164213 CGGTTTCATGCTTCGGCAGTTTGAAATTGCACGTCTTGTAGGTATCCGTCCGTACAATGC 164272
||||| ||| | || || |||||| |||| || ||| | || || || |||||
Sbjct 9135121 AGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGC 9135180
Query 164273 TATTGCGTTCTCTGGTCCGATTGCTGTCTTTGTCAGCGTTTTCCTTATGTACCCTCTCGG 164332
|| || ||||||||||| |||||||| ||||| || ||||| || || || || ||
Sbjct 9135181 AATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGG 9135240
Query 164333 GCAATCTAGTTGGTTCTTTGCCCCCTCGTTTGGGGTCGCGGCGATCTTCAGATTCCTCTT 164392
|||||| ||||||||||||| || ||||| || ||||| || || ||||| || |
Sbjct 9135241 TCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCT 9135300
Query 164393 GTTCCTCCAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCAGG 164452
|| ||||||| || ||||| |||||| | ||||| || ||||||||||| || || ||
Sbjct 9135301 CTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGG 9135360
Query 164453 CATCCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGTT 164512
| || || | ||||| || || ||||||||||||||||| ||||| |||||||| ||
Sbjct 9135361 TGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATT 9135420
Query 164513 TGAAGATGGTGAACAATCAAATACTTTCAAGGCATTCGAGCCTACTCAAGAGGAAGAGAC 164572
|||||||||||| ||||||| ||| || || | || ||||||| ||||| ||
Sbjct 9135421 TGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAAC 9135480
Query 164573 TTACTCGATGGTCACTGCCAACCGCTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAA 164632
||| || |||||||| || ||| |||| ||||| || || ||||| ||||||| |||
Sbjct 9135481 TTATTCAATGGTCACCGCTAACAGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAA 9135540
Query 164633 TAAGCGTTGGTTGCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTC 164692
||| |||||||| || ||||||||| | ||||| || || | || | |||| ||| |
Sbjct 9135541 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGC 9135600
Query 164693 TATTGGTATCATCGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGAT 164752
| |||| | ||||||| || | || || ||||| ||||| || || || ||||| ||
Sbjct 9135601 TCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAAT 9135660
Query 164753 TAGAGCAGCAGAGGATCCTGAATTTGAGACGTTCTATACGAAGAACATCCTCCTCAATGA 164812
| ||||| || ||||| ||||||||||| |||||||| || || || || | || ||
Sbjct 9135661 CCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGA 9135720
Query 164813 AGGACTCCGTGCCTGGATGGCTCCAGTAGACCAGCCACACGAATCGTTTGTATTTCCAGA 164872
||| | ||||| |||||||| | ||| ||||| || ||| || |||| || ||
Sbjct 9135721 AGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGA 9135780
Query 164873 GGAAGTTCTTCCGAGAGGTAACGCACTCTAA 164903
||| ||||| || | || ||||| || |||
Sbjct 9135781 GGAGGTTCTACCACGTGGAAACGCTCTTTAA 9135811
Score = 506 bits (560), Expect = 2e-138
Identities = 706/991 (71%), Gaps = 28/991 (3%)
Strand=Plus/Plus
Query 163917 GATCGCTTTGTCTTTGTGGGTTGGTCTGGATTACTTCTTTTTCCCACTGCTTATCTTGCA 163976
|| ||||| || ||||| ||||||||||| || | || ||||| ||| ||| | ||
Sbjct 12218253 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 12218312
Query 163977 ATTGGTGGCTGGCTTACTGGTACAACGTTTGTTACCAGTTGGTACACCCACGGTCTCGC- 164035
| || || ||| | || |||||||| ||||| || ||||| || || || | ||
Sbjct 12218313 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 12218372
Query 164036 -GT--CTAGTTACCTTGAGGGTGCTAATTTCCTTACAGCGGCTGTGTCAACGCCTGCTGA 164092
|| ||| ||| ||| ||| ||||| | || || || || || || ||||||
Sbjct 12218373 AGTTCCTATTTAGA---AGGTTGC-AATTTTTTAACCGCTGCAGTTTCTACTCCTGCTA- 12218427
Query 164093 TGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGGACTTCATTAG 164152
|| ||||| ||||||||||| | || || || || | | |
Sbjct 12218428 -------------------CTCCTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCG 12218468
Query 164153 GTGGTGCCAACTTGGGGGACTCTGGGCTTTTGTGGCGTTCCACGGATCTTTCGCTCTGAT 164212
||||| ||| | || || || ||||||||||| || ||||||| ||||||| | ||
Sbjct 12218469 TTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAAT 12218528
Query 164213 CGGTTTCATGCTTCGGCAGTTTGAAATTGCACGTCTTGTAGGTATCCGTCCGTACAATGC 164272
||||| ||| | || || |||||| |||| || ||| | || || || |||||
Sbjct 12218529 AGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCATATAATGC 12218588
Query 164273 TATTGCGTTCTCTGGTCCGATTGCTGTCTTTGTCAGCGTTTTCCTTATGTACCCTCTCGG 164332
|| || ||||||||||| |||||||| ||||| || ||||| || || || || ||
Sbjct 12218589 AATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGG 12218648
Query 164333 GCAATCTAGTTGGTTCTTTGCCCCCTCGTTTGGGGTCGCGGCGATCTTCAGATTCCTCTT 164392
|||||| ||||||||||||| || ||||| || ||||| || || ||||| || |
Sbjct 12218649 TCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCT 12218708
Query 164393 GTTCCTCCAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCAGG 164452
|| ||||||| || ||||| |||||| | ||||| || ||||||||||| || || ||
Sbjct 12218709 CTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGG 12218768
Query 164453 CATCCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGTT 164512
| ||||| | ||||| || || |||||||||| |||||| ||||| |||||||| ||
Sbjct 12218769 TGTACTTGGCGCGGCTCTGCTATGCGCTATTCATGTTGCTACTGTAGAAAATACTTTATT 12218828
Query 164513 TGAAGATGGTGAACAATCAAATACTTTCAAGGCATTCGAGCCTACTCAAGAGGAAGAGAC 164572
|||||||||||| ||||||| ||| || || | || ||||||| ||||| ||
Sbjct 12218829 TGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAAC 12218888
Query 164573 TTACTCGATGGTCACTGCCAACCGCTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAA 164632
||| || |||||||| || |||||||| ||||| || || ||||| ||||||| |||
Sbjct 12218889 TTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAA 12218948
Query 164633 TAAGCGTTGGTTGCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTC 164692
||| |||||||| || ||||||||| | ||||| || || | || | |||| ||| |
Sbjct 12218949 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGC 12219008
Query 164693 TATTGGTATCATCGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGAT 164752
| |||| | ||||||| || | || || ||||| ||||| ||||| || |||| ||
Sbjct 12219009 TCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTTGTTTCCTAGGAAAT 12219068
Query 164753 TAGAGCAGCAGAGGATCCTGAATTTGAGACGTTCTATACGAAGAACATCCTCCTCAATGA 164812
| ||||| || ||||| ||||||||||| |||||||| || || || || | || ||
Sbjct 12219069 CTGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGA 12219128
Query 164813 AGGACTCCGTGCCTGGATGGCTCCAGTAGACCAGCCACACGAATCGTTTGTATTTCCAGA 164872
||| | ||||| |||||| | | ||| ||||| || ||| || |||| || ||
Sbjct 12219129 AGGTATTCGTGCTTGGATGACGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGA 12219188
Query 164873 GGAAGTTCTTCCGAGAGGTAACGCACTCTAA 164903
||| ||||| || | || ||||| || |||
Sbjct 12219189 GGAGGTTCTACCACGTGGAAACGCTCTTTAA 12219219
>seq74
Length=21493
Score = 241 bits (266), Expect = 1e-58
Identities = 254/336 (76%), Gaps = 9/336 (3%)
Strand=Plus/Minus
Query 161229 GGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTCGCTGCTCATGGTTACTTC 161288
||||||| || |||||||||||| | || |||||||| || |||||||||||||| ||
Sbjct 11003 GGTTACAGATTCGGTCAAGAAGAATAAACTTACAACATTGTAGCTGCTCATGGTTATTTT 10944
Query 161289 GGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCGTTGCACTTCTTCCTC 161348
|| || ||||||||| | ||||||| || ||||| || || |||||| |
Sbjct 10943 GGCCGATTGATCTTCCGTT---------TCAACAATTCTCGTTCTTTACATTTCTTCTTA 10893
Query 161349 GCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCTCCACCATGGCATTC 161408
|| || ||||| || || ||||| ||||| ||||| | ||| | ||| ||||| |||
Sbjct 10892 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTC 10833
Query 161409 AACCTGAACGGATTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAAC 161468
||||| || || ||||| |||||||| || | | ||| |||| || || | ||
Sbjct 10832 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGGCGTGTTATTAAT 10773
Query 161469 ACCTGGGCTGACGTTCTGAATCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAAT 161528
|| |||||||| || | || ||| ||||| ||||||||||||| ||||| || ||||||
Sbjct 10772 ACTTGGGCTGATATTATTAACCGTACTAACTTTGGTATGGAAGTTATGCATGAACGTAAT 10713
Query 161529 GCTCACAACTTCCCTCTGGATCTCGCTGCTGCTGAG 161564
||||||||||||||||| || || ||||||| ||||
Sbjct 10712 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 10677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 559323133846400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |