Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq8 78.8 2e-12 >seq8 Length=40886855 Score = 78.8 bits (86), Expect = 2e-12 Identities = 80/103 (78%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 91 GTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTAC 150 |||||||| || || | || || ||| | || |||||||||||||| |||||| || Sbjct 1883067 GTAGGAGTATGTGCCATA-CTGAGCCCCAATATGGCTGATCATCCTCTCGGACCAGCTAT 1883009 Query 151 GGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193 ||||| | || ||||| ||| |||| ||||||||||||| || Sbjct 1883008 GGATCATTGCATTGGTAAGCTATTATTTCACCAACTAGCTCAT 1882966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071702294880