Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 2e-16 >seq4 Length=23266485 Score = 93.3 bits (102), Expect = 2e-16 Identities = 165/233 (71%), Gaps = 16/233 (7%) Strand=Plus/Minus Query 192 TTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCAC 251 |||||||||| ||||| |||||| || | ||| ||| | ||| ||||||| ||||||| Sbjct 17530240 TTCACCCCTAACCACAACTCATCCGCTGATTTT--AACATCAGTCGGTTCGGACCTCCAC 17530183 Query 252 GCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCT-TGAT 310 || | |||| | |||| |||| ||| ||||| |||| | |||||||| | | Sbjct 17530182 TTAGTTTCACCCAAGTTTCATCCTGGTCATAGATAGGTCACCCAGGTTCGGGTCCATAAG 17530123 Query 311 C-GTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACG---GG 366 | ||| || | ||||||| |||||||||||||||||||| || | | Sbjct 17530122 CAGTGACAATT----GCCCTATGAAGACTCGCTTTCGCTACGGCT--CCGGTAGGTTCCC 17530069 Query 367 TTAACCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGC 418 |||||| || ||| | | | |||| |||||||||||||| |||||||| Sbjct 17530068 TTAACCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGC 17530018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817095234304