Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20alpina_20[genbank_20GCA_5F000733195.1_202014-08-12] 27,771 sequences; 308,032,609 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 5e-16 >seq4 Length=23266485 Score = 91.5 bits (100), Expect = 5e-16 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | |||||||| | |||| ||| | ||| Sbjct 17530096 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGACCTATCTATG 17530155 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 |||||||||| | ||| | || |||||||||||||| ||| ||||| ||||| Sbjct 17530156 ACCAGGATGAAACTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTT--AAAATC 17530213 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAA 148 || ||||||| ||||| |||||||||| Sbjct 17530214 AGCGGATGAGTTGTGGTTAGGGGTGAA 17530240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689130781184