Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20montbretiana_20[genbank_20GCA_5F001484125.1_202016-01-04] 28,775 sequences; 199,120,032 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq22335 141 1e-31 seq1011 140 3e-31 >seq22335 Length=557 Score = 141 bits (156), Expect = 1e-31 Identities = 144/185 (78%), Gaps = 6/185 (3%) Strand=Plus/Minus Query 9 GACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTT---TGCTCGAATACATTA 65 ||| ||||| |||| ||| | |||||||||||||||| || ||||||||| |||| Sbjct 225 GACATTTACCTTGATTTAATCAAAGCGTTCAAAGCAGGCATTAATTGCTCGAATGTATTA 166 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTA 125 |||||||||||| || | ||| || | | ||||||| ||||| || |||| | ||| Sbjct 165 GCATGGAATAATATAAGAAGACTTGTGA--CAATTTTGTTGGTTT-TAAGACCACAAGTA 109 Query 126 ATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 ||||| || | ||| ||||||||| | ||||| || |||| |||||||||||||||| Sbjct 108 ATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGA 49 Query 186 TTTAT 190 ||||| Sbjct 48 TTTAT 44 >seq1011 Length=620 Score = 140 bits (154), Expect = 3e-31 Identities = 143/185 (77%), Gaps = 5/185 (3%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT----TTGCTCGAATACATTA 65 |||||||||||||| ||||||||| | | |||||||| |||| |||| | Sbjct 109 ACTTTTACTTTGAACAAATTAGAGTGCTTCAAGCAGGCTGGATATTGCCTGAATGCTAGT 168 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTA 125 ||||||||||| ||||||||| | |||||||||||||| ||||| || ||| ||| Sbjct 169 GCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTTTCAGAACCAGAGGTA 227 Query 126 ATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 ||||| || | ||| ||||||||| | ||||| || |||| |||||||||||||||| Sbjct 228 ATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGA 287 Query 186 TTTAT 190 ||||| Sbjct 288 TTTAT 292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511857276000