Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= AAMG01000026.1 Length=199 Score E Sequences producing significant alignments: (Bits) Value seq26828 122 9e-26 >seq26828 Length=557 Score = 122 bits (134), Expect = 9e-26 Identities = 150/201 (75%), Gaps = 7/201 (3%) Strand=Plus/Plus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| |||||| ||| ||||| Sbjct 294 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTGGGCAAACAGAC 353 Query 61 TTCGTTAGATTGACTTATCTGAC-ATTTCTGGGG--CATATCTGAGAGTCCGGATTCTTC 117 |||||| | ||||| ||| || | ||||| | || |||| ||| || ||||| Sbjct 354 CGCGTTAGTTCAACTTA---GACTATATTTGGGGACCTTAGCTGATGGTCTGGGTTCTTT 410 Query 118 TCCTCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCA 177 |||||||| | |||||||| |||||| ||||||| || | ||| || ||| Sbjct 411 CCCTCTCGGACTTGGACCTTAGCACCCAAAGCCTCACT-GCCGGCCATATCTTGGTAGCA 469 Query 178 TTCGGAGTTTGGCAGGACTTG 198 ||||||||| | | ||| ||| Sbjct 470 TTCGGAGTTCGTCTGGATTTG 490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536208276576