Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq248150 132 5e-29 >seq248150 Length=2497 Score = 132 bits (146), Expect = 5e-29 Identities = 136/174 (78%), Gaps = 4/174 (2%) Strand=Plus/Minus Query 10 GCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAG-ATAACTC 68 ||||||||||||||| ||||||||||| || |||||||| | || ||| | | || Sbjct 2172 GCTTAGAAGCTTTTCCTGGAAGCATGGTATTTGCCACTTCGC--TGTACAAGTACAGCTT 2115 Query 69 GTCATCAGCTCCCGGCCT-TAGAATCCCGGATTTACCTAAGATTCCAGCCTACCACCTTA 127 | ||||| || ||| | || | |||||||||||||||| | | ||||| |||| Sbjct 2114 GCTATCAGATCTCGGTATATAATAGCCCGGATTTACCTAAGCTATAAACCTACATCCTTC 2055 Query 128 AACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCAT 181 || |||||||||| ||||| |||||| || ||||||||||||||||||||||| Sbjct 2054 CACCTGGACAACCATCGCCAGGCTGGCATAACCTTCTCCGTCCCTCCATCGCAT 2001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517057980984