Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq252826 118 2e-24 >seq252826 Length=193385 Score = 118 bits (130), Expect = 2e-24 Identities = 148/202 (73%), Gaps = 1/202 (0%) Strand=Plus/Minus Query 92 CACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTT 151 ||| || | ||| ||||||| |||| ||||| || ||||||||| ||||||| ||||| | Sbjct 116547 CACGGCTAAGAACGCTTCTT-GTGGGATTTCTACATTGCCCACTTGCTTCATACGTTTCT 116489 Query 152 TACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATT 211 |||| || |||||||| | ||| || |||||| || |||||||| ||||| | Sbjct 116488 TACCTGCTTTTTGCTTAGACAACAGTTTTTTCTTACGTGACACATCACCGCCATAGCACT 116429 Query 212 TGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAA 271 |||||||||||| || | | || || |||| | || |||| ||||| | |||| Sbjct 116428 TGGCCAGTACGTCTTTACGCATTGCTTTTACGGTACTGCGACCAATAATCTGACTACCAA 116369 Query 272 TGGCGGCCTGGATCGCGACGTC 293 | || || || ||||| || || Sbjct 116368 TCGCTGCTTGAATCGCCACATC 116347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 839421290116