Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq125822 178 3e-40 >seq125822 Length=25115 Score = 178 bits (196), Expect = 3e-40 Identities = 371/548 (68%), Gaps = 6/548 (1%) Strand=Plus/Plus Query 37676 CAAGACATCTTAGAAAACGGCGTCGAAAAAGAAGACCGAACGGGCGTCGGCACG--CTGT 37733 || || |||||| ||||||||| ||||||||||||| ||||| ||| ||| | || Sbjct 7730 CACGAAATCTTAACGAACGGCGTCAAAAAAGAAGACCGCACGGGAACCGGAACGACCAGT 7789 Query 37734 CGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAAGATGGATTTCCGCTCGTGACAACGA 37793 | || || | ||| | || ||| || || |||||||||||| | ||||| |||| Sbjct 7790 A--TCTTTGGTCATCAGATGCGGTTCCCTTTGCAGGATGGATTTCCGATGGTGACGACGA 7847 Query 37794 AAAAATTGCATATCCGCTCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACGA 37853 ||||||| ||||| || || || |||| || |||||||| | || || || | Sbjct 7848 AAAAATTACATATGAAGTCGATTATCCATGAGTTGATTTGGTTTATCTCGGGTGACACCA 7907 Query 37854 ACGTCCGCTATTTGCAGGAGAATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAACG 37913 || | ||| | || || || ||||| ||||||| | ||||||||||||||| ||| Sbjct 7908 ACATTTCATATCTTCAAGAAAACGGCGTCCGGATTTGGAACGAGTGGGCGGACGAAGACG 7967 Query 37914 GCGATCTCGGCCCGATTTACGGCGCGCAATGGCGCTCGTGGAAGGGAGCAGACGGGAAAA 37973 | ||||||| ||| |||| ||||| || ||||| || | | | | || || | Sbjct 7968 GGAATCTCGGACCGGTTTATGGCGCCCAGTGGCGTTCTTTCCCGAAACCGGATGGATCGA 8027 Query 37974 CCATCGACCAGATCGCATGGGTTGTCGAAGAGATCAA-ACGAAATCCGCATTCACGCCGG 38032 | | || ||| | || || |||| | || || ||| |||||| |||| || || Sbjct 8028 CGGTTGATCAGTTGGCCGATGTCATCGAGCAAATTAAGACG-AATCCGGATTCTCGTCGT 8086 Query 38033 CTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCAT 38092 ||| | || || ||||||||| | |||| || |||||| ||||||| || || Sbjct 8087 CTGATTGTCAGTGCTTGGAATCCCGGTCAATTAGAAGAGATGGCCTTGCCGCCCTGCCAC 8146 Query 38093 TACGCCTTTCAGTTCTATGTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCC 38152 ||||| || |||||||| ||||| |||||| ||| | | || || || Sbjct 8147 CTGCTGTTTCAATTTTATGTCGCGAACGGAAAGTTGTCGTGCCAGCTTTACCAACGGTCT 8206 Query 38153 GTTGATACGTTTTTAGGGTTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACGCATATG 38212 | ||| |||||||| | || ||||| || || ||||| || ||||||| ||| Sbjct 8207 GCCGATGTCTTTTTAGGTGTTCCATTTAATATTGCTTCTTACGCTTTGCTGACGCACATG 8266 Query 38213 GTAGCCCA 38220 | || || Sbjct 8267 ATTGCTCA 8274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130225435842200