Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq146431 156 3e-33
>seq146431
Length=15796
Score = 156 bits (172), Expect = 3e-33
Identities = 547/841 (65%), Gaps = 16/841 (2%)
Strand=Plus/Minus
Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155
|||||||| || || ||||| ||||||||||| | || || || ||| | || |||||
Sbjct 4669 ATGTACAAGAAAGCCGAAGCATCCTTCTGGACCGCCGAAGAAGTAGATCTATCACAAGAC 4610
Query 61156 ATGAATGACTGGGAGCGT-TTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214
||||||||| | | | ||| ||| |||| || ||||| ||||| || | ||
Sbjct 4609 GGACGTGACTGGGAAAATCTCAACGA-CGGAGAACGTCACTTCATCAAACACGTCCTCGC 4551
Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274
||||| ||||| || ||||| |||||| || ||| | || ||| | ||
Sbjct 4550 CTTCTTCGCCGCATCTGACGGAATCGTCCTCGAAAATCTCGCTTCTCGATTCATGTCAGA 4491
Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334
|| ||||| || || |||||| |||||||| || || || || || |||||| ||||
Sbjct 4490 TGTACAAGTCTCCGAAGCGCGTGCATTCTACGGATTTCAAATCGCGATTGAGAATATCCA 4431
Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACG 61394
|| |||||||| ||| | | ||||||| ||||||| || || | || |
Sbjct 4430 TTCTGAGATGTATAGTCTCTTACTCGATACTTACATCAAAGATAACAAAGAGAGAGATCA 4371
Query 61395 ATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGC--GGAAAGCGGATTGGGCCTTC 61452
| ||| || |||| || || || ||| || |||||| | ||||| |
Sbjct 4370 TCTATTCCGCGCAGTCGAAACAATTCC--TTGTGTTGCTAAGAAAGCTCAATGGGCTATG 4313
Query 61453 AATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTC 61512
| |||||| | | | | || |||| ||||||| | | || || || ||
Sbjct 4312 ACTTGGAT---CGATGGATCTCAAACTTTTGCTGAACGAATCGTAGCTTTCGCTTGTGTT 4256
Query 61513 GAGGGTGTATTTTTCAGTGG-ATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACT 61571
|| ||| | || ||| || | | | || | || || ||| | ||||||||||||||
Sbjct 4255 GAAGGTATCTTCTTCTCAGGTAGCTTCTG-TTCGATTTTCTGGCTTAAGAAACGTGGACT 4197
Query 61572 TATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGA 61631
||||| || | |||||| || || ||||| ||||| ||||| || | || |||||
Sbjct 4196 CATGCCTGGATTAACCTTCTCTAACGAATTGATCTCACGAGACGAAGGTTTACACTGTGA 4137
Query 61632 TTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGG 61691
||| ||| |||| | | | | || | ||| | || |||||||||| |||
Sbjct 4136 TTTCGCTTGTTTGATCTATACTCTCTTACGAACGAAGC-TC--ACGGAGGAGCGAGTGAA 4080
Query 61692 TGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGT 61751
|||||| | || ||||| | || || || ||| || ||||| | ||
Sbjct 4079 GTCGATTGTGTGCGATGCGGTGGCGATTGAGAGAGAGTTTGTGTGCGACGCGCTTCCGTG 4020
Query 61752 CTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCG 61811
| | | | || ||||| ||||| | ||| ||||||||||| |||||||| || |
Sbjct 4019 CGCGTTGGTTGGGATGAACCGTGGATTGATGAGTCAGTATATTGAGTTTGTTGCGGATAG 3960
Query 61812 TCTGTT-GGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCA 61870
|| || ||| |||| || | || | ||| | | || || ||||||| |
Sbjct 3959 GCTTTTGGGTGCGCTTGGCTACGGTAAGG-TGTATGGTGCTTCTAATCCGTTTGATTGGA 3901
Query 61871 TGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATC 61930
|||| | |||||||| | || || || |||||||| ||||| | || || || ||||
Sbjct 3900 TGGAGTTAATTTCGCTTCAAGGGAAAACTAATTTTTTTGAGAAGAGAGTTGGTGATTATC 3841
Query 61931 A 61931
|
Sbjct 3840 A 3840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396273184137920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |