Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq125822 111 2e-19 >seq125822 Length=25115 Score = 111 bits (122), Expect = 2e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 196163 CAGATGCGCTTCGATCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTG 196222 |||||||| ||| | |||| || ||||| ||| |||| || ||||| ||| | ||| || Sbjct 7802 CAGATGCGGTTCCCTTTGCAGGATGGATTTCCGATGGTGACGACGAAAAAATTACATATG 7861 Query 196223 CGTTCCATCATTCATGAACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTG 196282 || || || ||||| || | ||||| || || ||||||||||| || || Sbjct 7862 AAGTCGATTATCCATGAGTTGATTTGGTTTATCTCGGGTGACACCAACATTTCATATCTT 7921 Query 196283 AATGACAACGGTGTCTCTATCTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCG 196342 | || ||||| ||| || ||||||||||||||| ||||| ||| || || || ||| Sbjct 7922 CAAGAAAACGGCGTCCGGATTTGGAACGAGTGGGCGGACGAAGACGGGAATCTCGGACCG 7981 Query 196343 GTTTACGGTAAGCAGTGGCGT 196363 ||||| || ||||||||| Sbjct 7982 GTTTATGGCGCCCAGTGGCGT 8002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 768965178344160