Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_031918.1
Length=45342
Score E
Sequences producing significant alignments: (Bits) Value
seq104206 127 6e-25
>seq104206
Length=286
Score = 127 bits (140), Expect = 6e-25
Identities = 187/262 (71%), Gaps = 2/262 (1%)
Strand=Plus/Plus
Query 33618 AACAATTTCTGTGGTGTATTTTTCAACTCCAGCATTATCAGTCCATTTTCTAGTGCGCAA 33677
|||||||||||| ||||| ||| | ||| | ||| |||||||||||| ||||
Sbjct 26 AACAATTTCTGTAGTGTAGCGTTCTAAACCATTTTGATCCTGCCATTTTCTAGTTTGCAA 85
Query 33678 CTGA-CCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTCACCAGCAATTTCAGCGA 33736
||| ||||||| ||| ||||| || ||||| | |||||| || || ||||||||||| |
Sbjct 86 -TGATCCTTCAATATATACTTGAGAACCTTTTCGAAGATATTCGCCTGCAATTTCAGCTA 144
Query 33737 GCTTGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCT 33796
|| ||||| | ||||| | ||||||||||||| || || || || |||||| |
Sbjct 145 ATTTACCAAATAAAACTATTCTATGCCATTCAGTTTTTTCTTTATTTTCTCCAGTATTTT 204
Query 33797 TATCATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAACAGCGCCGCCATTTGGCA 33856
|||| ||||| ||| || || || | | | || | || || ||||| ||||
Sbjct 205 TATCTTTCCAATTTTCTGAAGTTGCTAATGTCATATTCACTACCGCATTACCATTAGGCA 264
Query 33857 TGTATCGCACTTCTGGGTCCTG 33878
| || || ||||| || || ||
Sbjct 265 TATAACGAACTTCAGGATCTTG 286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144512753102144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |