Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq104206 127 6e-25 >seq104206 Length=286 Score = 127 bits (140), Expect = 6e-25 Identities = 187/262 (71%), Gaps = 2/262 (1%) Strand=Plus/Plus Query 33618 AACAATTTCTGTGGTGTATTTTTCAACTCCAGCATTATCAGTCCATTTTCTAGTGCGCAA 33677 |||||||||||| ||||| ||| | ||| | ||| |||||||||||| |||| Sbjct 26 AACAATTTCTGTAGTGTAGCGTTCTAAACCATTTTGATCCTGCCATTTTCTAGTTTGCAA 85 Query 33678 CTGA-CCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTCACCAGCAATTTCAGCGA 33736 ||| ||||||| ||| ||||| || ||||| | |||||| || || ||||||||||| | Sbjct 86 -TGATCCTTCAATATATACTTGAGAACCTTTTCGAAGATATTCGCCTGCAATTTCAGCTA 144 Query 33737 GCTTGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCT 33796 || ||||| | ||||| | ||||||||||||| || || || || |||||| | Sbjct 145 ATTTACCAAATAAAACTATTCTATGCCATTCAGTTTTTTCTTTATTTTCTCCAGTATTTT 204 Query 33797 TATCATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAACAGCGCCGCCATTTGGCA 33856 |||| ||||| ||| || || || | | | || | || || ||||| |||| Sbjct 205 TATCTTTCCAATTTTCTGAAGTTGCTAATGTCATATTCACTACCGCATTACCATTAGGCA 264 Query 33857 TGTATCGCACTTCTGGGTCCTG 33878 | || || ||||| || || || Sbjct 265 TATAACGAACTTCAGGATCTTG 286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144512753102144