Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq249645 93.3 6e-14 seq248150 93.3 6e-14 >seq249645 Length=476466 Score = 93.3 bits (102), Expect = 6e-14 Identities = 136/190 (72%), Gaps = 3/190 (2%) Strand=Plus/Plus Query 153607 TCCTAGAAGGTATTCGTTTTTACGTATCATTTGCTTGTAGTTTTGCCTTTGGTGAGCTAA 153666 ||||||||| |||||||| || || || |||||||| ||||| |||| ||||| | Sbjct 268792 TCCTAGAAGCCATTCGTTTCTATGTCTCGTTTGCTTGCTCGTTTGCGTTTGCTGAGCGCA 268851 Query 153667 AGCAGATGGAAGGTTCAGCTAAAATCATTAGTTTAATTGCTCGTGATGAGTCACAACACC 153726 | |||||||||| || |||||||||| | || ||||||||||| | | || Sbjct 268852 AATTGATGGAAGGTAATGCCAAAATCATTAAGCTCATCGCTCGTGATGAAGCGCTGCATT 268911 Query 153727 TGGTAATCACCCAGAATATTCTAAAAAAC-TGGGAGAAGG--GTGACGATCCCGAGATGG 153783 || | || ||| |||| ||||| | || | | || |||||||||| ||||||| Sbjct 268912 TGACAGGTACGCAGCATATGCTAAACCTCATGCGCAACGGTCGTGACGATCCTGAGATGG 268971 Query 153784 TTGATATTGC 153793 | || ||||| Sbjct 268972 TCGAGATTGC 268981 >seq248150 Length=2497 Score = 93.3 bits (102), Expect = 6e-14 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 142800 TAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCGAGTCCGTTAT 142859 |||||||||||||||||||||||| ||||| |||||| ||||||||||||| |||||| Sbjct 209 TAGCTCAGTTGGTAGAGCGCCTGCCTTGCACGCAGGAGGTCAACGGTTCGACTCCGTTTG 268 Query 142860 TCTCCACCA 142868 |||||||| Sbjct 269 GCTCCACCA 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 689149484261280