Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq1 118 9e-25 seq3 104 2e-20 seq2 95.1 1e-17 seq9 87.8 1e-15 seq4 84.2 2e-14 >seq1 Length=107035537 Score = 118 bits (130), Expect = 9e-25 Identities = 123/160 (77%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| | | Sbjct 98283827 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACAG 98283885 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| |||| | |||||||| ||||||| |||| |||||||||||||| Sbjct 98283886 CCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 98283945 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | |||||||||||||||||| ||||||||| || | |||| Sbjct 98283946 GCGGACTTGACGTCATCCCCCCCTTCCTCCAGTATATCAC 98283985 Score = 113 bits (124), Expect = 4e-23 Identities = 123/161 (76%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGA-TTAGCTCCCCCTCGCG 60 || ||||||| |||||||||| ||| | ||| || | ||| ||||||| |||||||| Sbjct 13468248 CGGGTTGCAGCCTACAATCCGAACTGAGG-ACAGGTTTTTGGAGTTAGCTCACCCTCGCG 13468190 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | ||| ||| ||| |||||||| ||||||| |||| |||||||| || Sbjct 13468189 CGATCGCGATCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCA 13468130 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||| ||||||||| ||||||||||||| || |||| Sbjct 13468129 TGATGACTTAACGTCATCCTCACCTTCCTCCGGCTTATCAC 13468089 Score = 93.3 bits (102), Expect = 4e-17 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 48 GCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTA 107 |||| |||||||||| | ||| ||| ||| |||||||| ||||||| |||| Sbjct 93051183 GCTCACCCTCGCGGGATCGCGATCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAG 93051242 Query 108 CCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 |||||||| ||||| |||||||||||||| ||||||||||||| || |||| Sbjct 93051243 GGCATAAGGGGCATGATGACTTGACGTCATCTTCACCTTCCTCCGGCTTATCAC 93051296 >seq3 Length=135057546 Score = 104 bits (114), Expect = 2e-20 Identities = 119/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 || ||||||| |||||||| | ||| | ||| ||| ||||||| ||||| ||| Sbjct 57725848 CGGGTTGCAGCCTACAATCTGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCACGG 57725907 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| ||| ||| |||||||| ||||||| ||| |||||||| ||| Sbjct 57725908 GATCGCGATCCTTTGTCCCGGCCATTGTAGCACGTGTGTCACCCAGGGCATAAGGGGCAT 57725967 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 57725968 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 57726007 Score = 96.9 bits (106), Expect = 3e-18 Identities = 118/160 (74%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 || ||||||| ||||||||| ||| | ||| ||| ||||||| ||||||||| Sbjct 57722730 CGGGTTGCAGCCTACAATCCAAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGG 57722671 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| ||| ||| || ||||| ||||||| ||| |||||| | ||| Sbjct 57722670 GATCGCGATCCTTTGTCCCGGCC-TTGTAGCACGTGTGTCGCCAAGGGCATAAGAGGCAT 57722612 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 57722611 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 57722572 >seq2 Length=93869048 Score = 95.1 bits (104), Expect = 1e-17 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 45 TTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCC 104 ||||||| |||||||||| | ||| ||| | | |||||||| ||||||| ||| Sbjct 4563791 TTAGCTCACCCTCGCGGGATCGCGATCCTTTATCCCGGCCATTGTAGCACGTGTGTCGCC 4563850 Query 105 CTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | |||||||| ||||| ||||||||||||||| |||||||||||| || |||| Sbjct 4563851 CAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCGACTTATCAC 4563907 Score = 80.6 bits (88), Expect = 2e-13 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 55 CTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAA 114 |||||||| | ||| ||| ||| |||||||| || |||| |||| ||||| Sbjct 751521 CTCGCGGGATCGCGATCCTTTGTCCCGGCCATTGTAGCACATGTGTCGCCCAGGGCATAA 751462 Query 115 GGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||| ||||||||||||||| ||||||||||| | || |||| Sbjct 751461 GGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCAGCTTATCAC 751415 >seq9 Length=120672674 Score = 87.8 bits (96), Expect = 1e-15 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 5 GTTGCAGACTACAATCCGGACT-ACGATACACTTTCTGGGATTAGCTCCCCCTCGCGGGT 63 ||||||| ||||||||| || | |||| | ||| ||| ||||||| || ||| ||| Sbjct 29849229 GTTGCAGCCTACAATCCAAACCGAGGATAGATTTT-TGGAGTTAGCTCACCTTCGTGGGA 29849171 Query 64 TGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGA 123 | ||| ||| ||| |||||||| | ||||| ||| | |||||||| | ||| Sbjct 29849170 TCGCGATCCTTTGTCCCAGCCATTGTAACATGTGTGTCACCCAAGGCATAAGGGGCTTGA 29849111 Query 124 GGACTTGACGTCATCCCCACCTTCCTCCGG 153 |||||||||| |||| |||||||||||| Sbjct 29849110 TGACTTGACGTTATCCTTACCTTCCTCCGG 29849081 >seq4 Length=123556382 Score = 84.2 bits (92), Expect = 2e-14 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 13 CTACAATCCGGACT-ACGATACACTTTCTGGGATTAGCTCCCCCTCGCGGGTTGGCGGCC 71 ||||||||| ||| | ||| | ||| ||| ||||||| |||| ||||| | ||| | Sbjct 18191608 CTACAATCCAAACTGAGGATG-AGTTTTTGGAGTTAGCTCACCCTTGCGGGATCGCGATC 18191666 Query 72 CTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGA 131 || || |||||||| ||||||| |||| |||| ||| ||||| |||||| Sbjct 18191667 CTTTGCCCCGGCCATTGTAGCACGTGTGTTGCCCAGGGCATAGGGGGCATGATAACTTGA 18191726 Query 132 CGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||||| || |||||||||||| || |||| Sbjct 18191727 CGTCACCCTTACCTTCCTCCGGCTTATCAC 18191756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415993926790