Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25]
1,507 sequences; 1,084,261,490 total letters
Query= AAMG01001821.1
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 9e-25
seq3 104 2e-20
seq2 95.1 1e-17
seq9 87.8 1e-15
seq4 84.2 2e-14
>seq1
Length=107035537
Score = 118 bits (130), Expect = 9e-25
Identities = 123/160 (77%), Gaps = 1/160 (1%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| | |
Sbjct 98283827 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACAG 98283885
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| || ||| |||| | |||||||| ||||||| |||| ||||||||||||||
Sbjct 98283886 CCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 98283945
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
| |||||||||||||||||| ||||||||| || | ||||
Sbjct 98283946 GCGGACTTGACGTCATCCCCCCCTTCCTCCAGTATATCAC 98283985
Score = 113 bits (124), Expect = 4e-23
Identities = 123/161 (76%), Gaps = 2/161 (1%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGA-TTAGCTCCCCCTCGCG 60
|| ||||||| |||||||||| ||| | ||| || | ||| ||||||| ||||||||
Sbjct 13468248 CGGGTTGCAGCCTACAATCCGAACTGAGG-ACAGGTTTTTGGAGTTAGCTCACCCTCGCG 13468190
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| | ||| ||| ||| |||||||| ||||||| |||| |||||||| ||
Sbjct 13468189 CGATCGCGATCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCA 13468130
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||| ||||| ||||||||| ||||||||||||| || ||||
Sbjct 13468129 TGATGACTTAACGTCATCCTCACCTTCCTCCGGCTTATCAC 13468089
Score = 93.3 bits (102), Expect = 4e-17
Identities = 89/114 (78%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 48 GCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTA 107
|||| |||||||||| | ||| ||| ||| |||||||| ||||||| ||||
Sbjct 93051183 GCTCACCCTCGCGGGATCGCGATCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAG 93051242
Query 108 CCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|||||||| ||||| |||||||||||||| ||||||||||||| || ||||
Sbjct 93051243 GGCATAAGGGGCATGATGACTTGACGTCATCTTCACCTTCCTCCGGCTTATCAC 93051296
>seq3
Length=135057546
Score = 104 bits (114), Expect = 2e-20
Identities = 119/160 (74%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|| ||||||| |||||||| | ||| | ||| ||| ||||||| ||||| |||
Sbjct 57725848 CGGGTTGCAGCCTACAATCTGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCACGG 57725907
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| ||| ||| |||||||| ||||||| ||| |||||||| |||
Sbjct 57725908 GATCGCGATCCTTTGTCCCGGCCATTGTAGCACGTGTGTCACCCAGGGCATAAGGGGCAT 57725967
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 57725968 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 57726007
Score = 96.9 bits (106), Expect = 3e-18
Identities = 118/160 (74%), Gaps = 1/160 (1%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|| ||||||| ||||||||| ||| | ||| ||| ||||||| |||||||||
Sbjct 57722730 CGGGTTGCAGCCTACAATCCAAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGG 57722671
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| ||| ||| || ||||| ||||||| ||| |||||| | |||
Sbjct 57722670 GATCGCGATCCTTTGTCCCGGCC-TTGTAGCACGTGTGTCGCCAAGGGCATAAGAGGCAT 57722612
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 57722611 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 57722572
>seq2
Length=93869048
Score = 95.1 bits (104), Expect = 1e-17
Identities = 91/117 (78%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 45 TTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCC 104
||||||| |||||||||| | ||| ||| | | |||||||| ||||||| |||
Sbjct 4563791 TTAGCTCACCCTCGCGGGATCGCGATCCTTTATCCCGGCCATTGTAGCACGTGTGTCGCC 4563850
Query 105 CTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
| |||||||| ||||| ||||||||||||||| |||||||||||| || ||||
Sbjct 4563851 CAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCGACTTATCAC 4563907
Score = 80.6 bits (88), Expect = 2e-13
Identities = 82/107 (77%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 55 CTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAA 114
|||||||| | ||| ||| ||| |||||||| || |||| |||| |||||
Sbjct 751521 CTCGCGGGATCGCGATCCTTTGTCCCGGCCATTGTAGCACATGTGTCGCCCAGGGCATAA 751462
Query 115 GGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||| ||||| ||||||||||||||| ||||||||||| | || ||||
Sbjct 751461 GGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCAGCTTATCAC 751415
>seq9
Length=120672674
Score = 87.8 bits (96), Expect = 1e-15
Identities = 111/150 (74%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 5 GTTGCAGACTACAATCCGGACT-ACGATACACTTTCTGGGATTAGCTCCCCCTCGCGGGT 63
||||||| ||||||||| || | |||| | ||| ||| ||||||| || ||| |||
Sbjct 29849229 GTTGCAGCCTACAATCCAAACCGAGGATAGATTTT-TGGAGTTAGCTCACCTTCGTGGGA 29849171
Query 64 TGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGA 123
| ||| ||| ||| |||||||| | ||||| ||| | |||||||| | |||
Sbjct 29849170 TCGCGATCCTTTGTCCCAGCCATTGTAACATGTGTGTCACCCAAGGCATAAGGGGCTTGA 29849111
Query 124 GGACTTGACGTCATCCCCACCTTCCTCCGG 153
|||||||||| |||| ||||||||||||
Sbjct 29849110 TGACTTGACGTTATCCTTACCTTCCTCCGG 29849081
>seq4
Length=123556382
Score = 84.2 bits (92), Expect = 2e-14
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 13 CTACAATCCGGACT-ACGATACACTTTCTGGGATTAGCTCCCCCTCGCGGGTTGGCGGCC 71
||||||||| ||| | ||| | ||| ||| ||||||| |||| ||||| | ||| |
Sbjct 18191608 CTACAATCCAAACTGAGGATG-AGTTTTTGGAGTTAGCTCACCCTTGCGGGATCGCGATC 18191666
Query 72 CTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGA 131
|| || |||||||| ||||||| |||| |||| ||| ||||| ||||||
Sbjct 18191667 CTTTGCCCCGGCCATTGTAGCACGTGTGTTGCCCAGGGCATAGGGGGCATGATAACTTGA 18191726
Query 132 CGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||||| || |||||||||||| || ||||
Sbjct 18191727 CGTCACCCTTACCTTCCTCCGGCTTATCAC 18191756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415993926790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |