Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 1e-15 seq6 82.4 5e-14 seq9 78.8 7e-13 seq1 78.8 7e-13 seq10 73.4 3e-11 >seq2 Length=93869048 Score = 87.8 bits (96), Expect = 1e-15 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 93387329 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 93387270 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 93387269 CTTTCGTCGCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 93387212 >seq6 Length=112752717 Score = 82.4 bits (90), Expect = 5e-14 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| || || |||||||||| | || Sbjct 17539838 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 17539897 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||| | |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 17539898 CTTTTGTCCCTGCTCGACGAGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 17539955 >seq9 Length=120672674 Score = 78.8 bits (86), Expect = 7e-13 Identities = 89/118 (75%), Gaps = 6/118 (5%) Strand=Plus/Minus Query 4 CTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCG---GATCACTATGACCTG 60 |||||||||||||||| | |||||||||| || | ||||| |||||||| | || Sbjct 1775656 CTTTTATCCGTTGAGCCACGGCCCTTCCACTC---GGCACCGTCAGATCACTAAGGCCGA 1775600 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| ||| ||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 1775599 CTTTCGTCTCTACTCGACGGGTGGGTCTTGCAGTCAAGCTCTCTTCTGCCTTTGCACT 1775542 Score = 78.8 bits (86), Expect = 7e-13 Identities = 88/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||| ||||| |||||||||| || || |||||||||| | || Sbjct 52720177 TAACTTTTATCCGTTAAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 52720236 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | ||| | || ||||||| Sbjct 52720237 CTTTCGTCGCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTACCTTTGCACT 52720294 >seq1 Length=107035537 Score = 78.8 bits (86), Expect = 7e-13 Identities = 90/120 (75%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||| ||||| || || |||||||||| | || Sbjct 35576775 TAACTTTTATCCGTTGAGCGACGGCCTTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 35576716 Query 61 CTTTCGCATCTGCTCT--AGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| ||||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 35576715 CTTTCGTCCCTGCTCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 35576656 Score = 78.8 bits (86), Expect = 7e-13 Identities = 88/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| | |||||||| ||| | ||||||||||| | || Sbjct 60233488 TAACTTTTATCCGTTGAGCGACGACCCTTCCACTCAGCATCGCCGGATCACTAAGGCCGA 60233547 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| || ||| | ||| |||| || |||| Sbjct 60233548 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCGAGCTCCCTTCTGCCTTTACACT 60233605 >seq10 Length=109463236 Score = 73.4 bits (80), Expect = 3e-11 Identities = 87/117 (74%), Gaps = 6/117 (5%) Strand=Plus/Minus Query 5 TTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCG---GATCACTATGACCTGC 61 ||||||||||||||||| |||||||||| || | ||||| |||||||| | || | Sbjct 12873959 TTTTATCCGTTGAGCGACGGCCCTTCCACTC---GACACCGTCAGATCACTAAGGCCGAC 12873903 Query 62 TTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 ||||| ||||||| | | | ||| || |||||| | ||| || | ||||||| Sbjct 12873902 TTTCGTCTCTGCTCGATGGATGGGTCTTACAGTCAAGCTCGCTTCTGTCTTTGCACT 12873846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351995026900