Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20duranensis_20[refseq_20GCF_5F000817695.2_202017-04-25] 1,507 sequences; 1,084,261,490 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq1 134 3e-29 seq7 131 4e-28 seq5 127 4e-27 seq6 122 2e-25 seq524 120 6e-25 seq3 116 8e-24 seq4 104 5e-20 seq9 96.9 7e-18 seq2 80.6 6e-13 >seq1 Length=107035537 Score = 134 bits (148), Expect = 3e-29 Identities = 150/199 (75%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||||| ||||| ||| ||||| | | ||| ||||||| Sbjct 20822997 AAAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACGCGGCATTGCTCCGTCAGACTT 20822939 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 |||||||||| || ||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct 20822938 TCGTCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 20822879 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | ||| ||||| || | ||||||| || | ||| ||| | | || ||| || || Sbjct 20822878 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 20822819 Query 261 ACCCCGCCTACTACCTAAT 279 || | || |||| ||||| Sbjct 20822818 GCCTCACCAACTAGCTAAT 20822800 >seq7 Length=79126724 Score = 131 bits (144), Expect = 4e-28 Identities = 149/199 (75%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||||| ||||| ||| ||||| | | ||| |||| || Sbjct 13533612 AAAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTT 13533670 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct 13533671 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 13533730 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | ||| ||||| || | ||||||| || || ||| ||| | | || ||| || || Sbjct 13533731 TCCCAGTGTGGCTGATCATCCTCTCGGACCCGCTACTGATCATCGCCTTGGTAAGCTATT 13533790 Query 261 ACCCCGCCTACTACCTAAT 279 || | || |||| ||||| Sbjct 13533791 GCCTCACCAACTAGCTAAT 13533809 >seq5 Length=110037037 Score = 127 bits (140), Expect = 4e-27 Identities = 195/279 (70%), Gaps = 18/279 (6%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | ||| || | Sbjct 8922755 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCGGATACCGTCAT-----------T 8922707 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| || |||||||||| || | |||||| ||||| ||| ||||| Sbjct 8922706 GC------TTCTTCTCTGGGAAAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACGC 8922654 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || ||||| |||||||||||||||||| Sbjct 8922653 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 8922594 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| || Sbjct 8922593 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 8922534 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | | || ||| || || || | || |||| ||||| Sbjct 8922533 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 8922495 Score = 125 bits (138), Expect = 2e-26 Identities = 148/199 (74%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||||| ||||| ||| ||||| | | ||| |||| || Sbjct 39095146 AAAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTT 39095088 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct 39095087 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 39095028 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | ||| ||||| || | ||||||| || | ||| ||| | | || ||| || || Sbjct 39095027 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 39094968 Query 261 ACCCCGCCTACTACCTAAT 279 || | || |||| ||||| Sbjct 39094967 GCCTCACCAACTAGCTAAT 39094949 Score = 102 bits (112), Expect = 2e-19 Identities = 96/121 (79%), Gaps = 1/121 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||||| ||||| ||| ||||| | | ||| |||| || Sbjct 109601177 AAAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTT 109601119 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct 109601118 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 109601059 Query 201 T 201 | Sbjct 109601058 T 109601058 >seq6 Length=112752717 Score = 122 bits (134), Expect = 2e-25 Identities = 194/280 (69%), Gaps = 20/280 (7%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAA-GCTCCCACACG 59 |||||||||||| |||||||||||||||||||| | ||| || ||| || | | Sbjct 95750968 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCGGATACCGTCATTGCTTCCTCTCC 95750909 Query 60 TGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACG 119 |||| |||||||| || | |||||| ||||| ||| |||| Sbjct 95750908 GGGAA------------------AAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACG 95750868 Query 120 CTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTA 179 | | | ||| |||| || ||| |||||| || ||||| |||| |||||||||||| Sbjct 95750867 CGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTACTGCCTCCCGTA 95750808 Query 180 GGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCA 239 ||||| ||| ||||||||||| ||| ||||| || | ||||||| || | ||| | Sbjct 95750807 GGAGTCTGGGCCGTGTCTCAGCCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGA 95750748 Query 240 TCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 || | | || ||| || || |||| || |||| ||||| Sbjct 95750747 TCATCGCCTTGGTAAGCTATTGCCCCACCAACTAGCTAAT 95750708 >seq524 Length=39578 Score = 120 bits (132), Expect = 6e-25 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| || Sbjct 19690 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 19749 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||| ||||||||||| || |||||||||||| ||| ||||| || | ||| Sbjct 19750 CTGCTGCCCCCCGTAGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 19809 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284 ||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| || Sbjct 19810 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 19869 Query 285 GCATCCCCATCGTACACCG 303 ||| | |||| ||| || Sbjct 19870 GCAGGCTCATCAAACAGCG 19888 >seq3 Length=135057546 Score = 116 bits (128), Expect = 8e-24 Identities = 146/199 (73%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||||| ||||| ||| ||||| | | ||| ||||||| Sbjct 57721848 AAAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACGCGGCATTGCTCCATCAGACTT 57721790 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 || |||||| || ||||| ||||| |||||| ||||||||| ||| ||||||||||| Sbjct 57721789 TCACCCATTGCGGAAAATTCCCCACTGTTGCCTCTCGTAGGAGTCTGGGCCGTGTCTCAG 57721730 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | ||| ||||| || | ||||||| || | ||| ||| | | || ||| || || Sbjct 57721729 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 57721670 Query 261 ACCCCGCCTACTACCTAAT 279 || | || |||| ||||| Sbjct 57721669 GCCTCACCAACTAGCTAAT 57721651 Score = 104 bits (114), Expect = 5e-20 Identities = 143/199 (72%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | ||||| | ||| ||| ||||| | | ||| |||| || Sbjct 37374645 AAAAGAAGTTCACGACTCGTAGG-CTTTCTACCTCCACGCAGCATTGCTCTGTCAGGCTT 37374703 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||||||||| || ||||| ||||||||||||| |||||||| | | | |||||||| Sbjct 37374704 TCGTCCATTACGGAAAATTCCCCACTGCTGCCTCCTGTAGGAGTCTAGGCTATGTCTCAG 37374763 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | ||| ||||| || | |||||||||| | ||| ||| | | || ||| || || Sbjct 37374764 TCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 37374823 Query 261 ACCCCGCCTACTACCTAAT 279 || | || |||| ||||| Sbjct 37374824 GCCTCACCAACTAGCTAAT 37374842 >seq4 Length=123556382 Score = 104 bits (114), Expect = 5e-20 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 133 TCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCG 192 |||| || ||| |||||| || ||||| |||||||||||||||||||||| ||| ||| Sbjct 44484386 TCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 44484327 Query 193 TGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGT 252 ||||||||| ||| ||||| || | ||||||| || | ||| ||| | | || ||| Sbjct 44484326 TGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGT 44484267 Query 253 GGGCCGTTACCCCGCCTACTACCTAAT 279 || || || | || |||| ||||| Sbjct 44484266 AAGCTATTGCCTCACCAACTAGCTAAT 44484240 >seq9 Length=120672674 Score = 96.9 bits (106), Expect = 7e-18 Identities = 146/209 (70%), Gaps = 18/209 (9%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| || || |||| Sbjct 95439686 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA---------------ACGT 95439642 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || | ||| | ||||||||| | | |||||| ||||| ||| ||||| Sbjct 95439641 CATTGCTTCTTCTCCGGGA--AAAGAAGTTCATGACCCGTAGG-CCTTCTACCTCCACGC 95439585 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || | | |||||| || ||||| |||| ||||||||||||| Sbjct 95439584 GGCATTGCTCCGTCAGGCTTTTGCCCATTGCGGAAAATTCCCCACTACTGCCTCCCGTAG 95439525 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGT 209 |||| ||| |||||||||||| ||| ||| Sbjct 95439524 GAGTCTGGGCCGTGTCTCAGTCCCAGTGT 95439496 >seq2 Length=93869048 Score = 80.6 bits (88), Expect = 6e-13 Identities = 81/104 (78%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||||| ||||| ||| ||||| | | ||| |||| || Sbjct 32165089 AAAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTT 32165031 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGT 184 ||| |||||| || ||||| |||||||||||||||||||||| Sbjct 32165030 TCGCCCATTGCGAAAAATTCCCCACTGCTGCCTCCCGTAGGAGT 32164987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068783893184