Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arachis_20ipaensis_20[refseq_20GCF_5F000816755.2_202017-04-25] 548 sequences; 1,353,504,219 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq7 131 2e-28 seq4 122 9e-26 seq3 122 9e-26 seq1 122 9e-26 seq2 107 2e-21 >seq7 Length=126351151 Score = 131 bits (144), Expect = 2e-28 Identities = 140/181 (77%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 50703428 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 50703487 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | || | ||||| ||| || | ||| || ||||||| Sbjct 50703488 GGGATAACATCATAGGAT-TCCGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGA 50703545 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||||||||||||| | ||||| || |||| |||||||||||||||||||| Sbjct 50703546 TTAACAGGGATAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 50703605 Query 190 T 190 | Sbjct 50703606 T 50703606 Score = 127 bits (140), Expect = 2e-27 Identities = 139/181 (77%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 54697055 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 54697114 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | || | ||||| ||| || | ||| || ||||||| Sbjct 54697115 GGGATAACATCATAGGAT-TCCGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGA 54697172 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || |||| |||||||||||||||||||| Sbjct 54697173 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 54697232 Query 190 T 190 | Sbjct 54697233 T 54697233 Score = 122 bits (134), Expect = 9e-26 Identities = 138/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 48078395 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 48078454 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | || | ||||| ||| || | ||| || ||||||| Sbjct 48078455 GGGATAACATCATAGGAT-TCCGATCCTATTGTGTTGGCCTTCGGGATCGAA-GTAATGA 48078512 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| |||| |||| | ||||| || |||| |||||||||||||||||||| Sbjct 48078513 TTAACAGGGACAGTCAGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 48078572 Query 190 T 190 | Sbjct 48078573 T 48078573 Score = 122 bits (134), Expect = 9e-26 Identities = 138/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| || Sbjct 50620598 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAC 50620539 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | || | ||||| ||| || | ||| || ||||||| Sbjct 50620538 GGGATAACATCATAGGAT-TCCGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGA 50620481 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || |||| |||||||||||||||||||| Sbjct 50620480 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 50620421 Query 190 T 190 | Sbjct 50620420 T 50620420 Score = 122 bits (134), Expect = 9e-26 Identities = 138/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 50634170 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 50634111 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | || | ||||| ||| || | ||| || ||||||| Sbjct 50634110 GGGATAACATCATAGGAT-TCCGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGA 50634053 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || |||| | |||||||||||||||||| Sbjct 50634052 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAAGTGAAATTCTTGGATTTA 50633993 Query 190 T 190 | Sbjct 50633992 T 50633992 Score = 122 bits (134), Expect = 9e-26 Identities = 138/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || ||||||| || ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 66268986 CTGTTACTTTAAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 66268927 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | || | ||||| ||| || | ||| || ||||||| Sbjct 66268926 GGGATAACATCATAGGAT-TCCGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGA 66268869 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || |||| |||||||||||||||||||| Sbjct 66268868 TTAAGAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 66268809 Query 190 T 190 | Sbjct 66268808 T 66268808 Score = 118 bits (130), Expect = 1e-24 Identities = 137/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 50686939 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 50686998 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | || | ||||| ||| || | ||| || ||||||| Sbjct 50686999 GGGATAACATCATAGGAT-TCCGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGA 50687056 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | |||| || || | |||||||||||||||||||| Sbjct 50687057 TTAACAGGGACAGTCGGGGGCATTCATATTTCATAGTAAGAGGTGAAATTCTTGGATTTA 50687116 Query 190 T 190 | Sbjct 50687117 T 50687117 Score = 118 bits (130), Expect = 1e-24 Identities = 137/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| || Sbjct 54573707 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAC 54573766 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | || | ||||| ||| || | ||| || ||||||| Sbjct 54573767 GGGATAACATCATAGGAT-TCCGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGA 54573824 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| |||||||| | ||||| || |||| |||||||||||||||||||| Sbjct 54573825 TTAACAGGGACAGTCGGGGACATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 54573884 Query 190 T 190 | Sbjct 54573885 T 54573885 Score = 118 bits (130), Expect = 1e-24 Identities = 137/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| || Sbjct 54581838 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAC 54581897 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | || | ||||| ||| || | ||| || ||||||| Sbjct 54581898 GGGATAACATCATAGGAT-TCCGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGA 54581955 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| | |||| |||||||||||||||||||| Sbjct 54581956 TTAACAGGGACAGTCGGGGGCATTCGTATTTCAAAGTCAGAGGTGAAATTCTTGGATTTA 54582015 Query 190 T 190 | Sbjct 54582016 T 54582016 Score = 118 bits (130), Expect = 1e-24 Identities = 137/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| || Sbjct 54700249 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAC 54700308 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | || | ||||| ||| || | ||| || ||||||| Sbjct 54700309 GGGATAACATCATAGGAT-TCCGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGA 54700366 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| | |||| |||||||||||||||||||| Sbjct 54700367 TTAACAGGGACAGTCGGGGGCATTCGTATTTCAAAGTCAGAGGTGAAATTCTTGGATTTA 54700426 Query 190 T 190 | Sbjct 54700427 T 54700427 Score = 100 bits (110), Expect = 3e-19 Identities = 131/180 (73%), Gaps = 11/180 (6%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATG 70 || |||||||||| ||||||||| | |||||||| |||| ||| || |||| Sbjct 48095775 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCT---------TAGCATG 48095825 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130 | |||| | |||||| | || | ||||| ||| || | ||| || |||||||| Sbjct 48095826 GGATAACATCATAGGAT-TCCGATCCTATTGTGTTGGCCTTCGGGATCGAA-GTAATGAT 48095883 Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 || | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||| Sbjct 48095884 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 48095943 >seq4 Length=133615181 Score = 122 bits (134), Expect = 9e-26 Identities = 138/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 110726747 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 110726806 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | || | ||||| ||| || | ||| || ||||||| Sbjct 110726807 GGGATAACATCATAGGAT-TCCGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGA 110726864 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||| ||||| | ||||| || |||| |||||||||||||||||||| Sbjct 110726865 TTAACAGGGACAGTTGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 110726924 Query 190 T 190 | Sbjct 110726925 T 110726925 >seq3 Length=136109863 Score = 122 bits (134), Expect = 9e-26 Identities = 138/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 96160927 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 96160868 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | || | ||||| ||| || | ||| || ||||||| Sbjct 96160867 GGGATAACATCATAGGAT-TCCGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGA 96160810 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| |||| |||| | ||||| || |||| |||||||||||||||||||| Sbjct 96160809 TTAACAGGGACAGTCAGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 96160750 Query 190 T 190 | Sbjct 96160749 T 96160749 >seq1 Length=137414913 Score = 122 bits (134), Expect = 9e-26 Identities = 138/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||| | |||| ||||| | |||||||| ||| Sbjct 49450349 CTATTACTTTGAAGAAATTAGAGTGCTCAAAGAAAGCCTATGCTCTGTATACATTAGCAT 49450290 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | || | ||||| ||| || | ||| || ||||||| Sbjct 49450289 GGGATAACATCATAGGATTT-CGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGA 49450232 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || |||| |||| ||||||||||||||| Sbjct 49450231 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTAAAATTCTTGGATTTA 49450172 Query 190 T 190 | Sbjct 49450171 T 49450171 >seq2 Length=108997779 Score = 107 bits (118), Expect = 2e-21 Identities = 137/182 (75%), Gaps = 5/182 (3%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || ||| |||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 12436255 CTGTTATTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 12436196 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT-TTCTAGGACCGCCCGTAATG 128 || |||| | |||||| | || | ||||| ||| || |||| ||| | |||||| Sbjct 12436195 GGGATAACATCATAGGAT-TCCGATCCTATTGTGTTGGCCTTCT-GGATTGGA-GTAATG 12436139 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188 || || | || |||| |||| | |||| || |||| ||||||||||||||||||| Sbjct 12436138 ATTAACAGAGACAGTCAGGGGCATTCATATTTCATAGTCAGAGGTGAAATTCTTGGATTT 12436079 Query 189 AT 190 || Sbjct 12436078 AT 12436077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511997281920