Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq243664 264 2e-68 seq275373 154 3e-35 seq395726 82.4 1e-13 seq395921 78.8 2e-12 >seq243664 Length=462 Score = 264 bits (292), Expect = 2e-68 Identities = 223/269 (83%), Gaps = 4/269 (1%) Strand=Plus/Plus Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 ||||||||||||||||||||||||||| ||||||||||| || | || || ||||||| Sbjct 18 GGTGACGGCGTGCCTTTTGCATAATGAACCTACGAGTTACTCTT-ACTGGCAAGGTTAAC 76 Query 130 GGCT-TCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGG 187 |||| ||||| | | | |||||| ||||||||| ||| ||||||||| ||| || | Sbjct 77 GGCTATCAGGTCGGCAA-CCGAAGCGAAAGCGAGTCTTCACAGGGCGATTTAGTCAGTAG 135 Query 188 CGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGA 247 ||||||||||||| ||||||||||| ||||||||||||| |||||| | Sbjct 136 GAGTAGACGCGAAACCAAGTGATCTACCCTTGAGCAGGTTGAAGGTTGGGTAACACCAAC 195 Query 248 TGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAA 307 ||||||||||||||||||| |||||||||| |||||||||||| | |||||||||||||| Sbjct 196 TGGAGGACCGAACCGGTAAGCGTTGAAAAGCTTTCGGATGACTTGAGGGTAGGGGTGAAA 255 Query 308 GGCCAATCAAACTGGGAAATAGCTCGTAC 336 ||| ||||||||| ||| ||||||||||| Sbjct 256 GGCTAATCAAACTTGGAGATAGCTCGTAC 284 >seq275373 Length=335 Score = 154 bits (170), Expect = 3e-35 Identities = 205/281 (73%), Gaps = 8/281 (3%) Strand=Plus/Plus Query 55 GGAGCCGAGTGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTC 114 ||||| || | ||| ||||| |||| ||||||| |||||| | | ||| ||| | | Sbjct 1 GGAGCGGACTTGTTCCGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTA-TATAC 59 Query 115 ACCAGCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGC 174 | ||| || |||| | | || || || || ||||||||| ||||| ||||| Sbjct 60 AGTAGCAAGCTTAACCGGATAGGGG-----AGGCGTAGCGAAAGCGAGTCTTAATAGGGC 114 Query 175 GACGAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCG 234 | | ||||| || ||||| ||||||| | |||||| ||| | ||||||||||| Sbjct 115 GCCAAGTTGCTGTGTATAGACCCGAAACCAAGCGATCTATCCATGGGCAGGTTGAAGGTT 174 Query 235 CGGTAACGCGTGA-TGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGC 293 |||||| | ||| ||||||||||||||| | |||||||||||| |||||||| | Sbjct 175 AGGTAACAC-TGACTGGAGGACCGAACCGACTACCGTTGAAAAGTTAGCGGATGACCTGT 233 Query 294 GGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 || | || ||||||||| |||||| || ||| |||||| || Sbjct 234 GGATCGGAGTGAAAGGCTAATCAAGCTTGGAGATAGCTGGT 274 >seq395726 Length=26030 Score = 82.4 bits (90), Expect = 1e-13 Identities = 206/308 (67%), Gaps = 5/308 (2%) Strand=Plus/Minus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGG 71 |||| |||||||||| | |||| ||| || ||||| || |||| | | | Sbjct 5237 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCGGGGCTC 5178 Query 72 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGG 131 |||| |||||||| ||| | |||||||| ||| | | | | || || ||||||||| Sbjct 5177 TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGGG 5119 Query 132 CTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCT 191 | ||| ||||| || ||||||||| ||| | ||||| | || || | Sbjct 5118 AACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTAT 5063 Query 192 AGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGA 251 ||| |||| | |||||||| ||| || |||| ||||| ||| | | |||| Sbjct 5062 GGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGA 5003 Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311 || |||||||| | |||||| | | ||||||| | | || ||||||||||| ||| Sbjct 5002 GGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCC 4943 Query 312 AATCAAAC 319 | || ||| Sbjct 4942 ACTCGAAC 4935 >seq395921 Length=12958 Score = 78.8 bits (86), Expect = 2e-12 Identities = 104/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251 ||| ||||||| |||||| ||| ||||||||||||| || |||| | |||| Sbjct 9193 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 9134 Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311 |||||||||| | || | ||| | |||||||| | || ||||||||||||||| Sbjct 9133 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 9074 Query 312 AATCAAACTGGGAAATAGCTCGT 334 || ||| | ||| |||||| || Sbjct 9073 AACCAAGATCGGATATAGCTGGT 9051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 968947468800