Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09]
396,025 sequences; 631,307,653 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq243664 264 2e-68
seq275373 154 3e-35
seq395726 82.4 1e-13
seq395921 78.8 2e-12
>seq243664
Length=462
Score = 264 bits (292), Expect = 2e-68
Identities = 223/269 (83%), Gaps = 4/269 (1%)
Strand=Plus/Plus
Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129
||||||||||||||||||||||||||| ||||||||||| || | || || |||||||
Sbjct 18 GGTGACGGCGTGCCTTTTGCATAATGAACCTACGAGTTACTCTT-ACTGGCAAGGTTAAC 76
Query 130 GGCT-TCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGG 187
|||| ||||| | | | |||||| ||||||||| ||| ||||||||| ||| || |
Sbjct 77 GGCTATCAGGTCGGCAA-CCGAAGCGAAAGCGAGTCTTCACAGGGCGATTTAGTCAGTAG 135
Query 188 CGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGA 247
||||||||||||| ||||||||||| ||||||||||||| |||||| |
Sbjct 136 GAGTAGACGCGAAACCAAGTGATCTACCCTTGAGCAGGTTGAAGGTTGGGTAACACCAAC 195
Query 248 TGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAA 307
||||||||||||||||||| |||||||||| |||||||||||| | ||||||||||||||
Sbjct 196 TGGAGGACCGAACCGGTAAGCGTTGAAAAGCTTTCGGATGACTTGAGGGTAGGGGTGAAA 255
Query 308 GGCCAATCAAACTGGGAAATAGCTCGTAC 336
||| ||||||||| ||| |||||||||||
Sbjct 256 GGCTAATCAAACTTGGAGATAGCTCGTAC 284
>seq275373
Length=335
Score = 154 bits (170), Expect = 3e-35
Identities = 205/281 (73%), Gaps = 8/281 (3%)
Strand=Plus/Plus
Query 55 GGAGCCGAGTGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTC 114
||||| || | ||| ||||| |||| ||||||| |||||| | | ||| ||| | |
Sbjct 1 GGAGCGGACTTGTTCCGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTA-TATAC 59
Query 115 ACCAGCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGC 174
| ||| || |||| | | || || || || ||||||||| ||||| |||||
Sbjct 60 AGTAGCAAGCTTAACCGGATAGGGG-----AGGCGTAGCGAAAGCGAGTCTTAATAGGGC 114
Query 175 GACGAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCG 234
| | ||||| || ||||| ||||||| | |||||| ||| | |||||||||||
Sbjct 115 GCCAAGTTGCTGTGTATAGACCCGAAACCAAGCGATCTATCCATGGGCAGGTTGAAGGTT 174
Query 235 CGGTAACGCGTGA-TGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGC 293
|||||| | ||| ||||||||||||||| | |||||||||||| |||||||| |
Sbjct 175 AGGTAACAC-TGACTGGAGGACCGAACCGACTACCGTTGAAAAGTTAGCGGATGACCTGT 233
Query 294 GGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334
|| | || ||||||||| |||||| || ||| |||||| ||
Sbjct 234 GGATCGGAGTGAAAGGCTAATCAAGCTTGGAGATAGCTGGT 274
>seq395726
Length=26030
Score = 82.4 bits (90), Expect = 1e-13
Identities = 206/308 (67%), Gaps = 5/308 (2%)
Strand=Plus/Minus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGG 71
|||| |||||||||| | |||| ||| || ||||| || |||| | | |
Sbjct 5237 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCGGGGCTC 5178
Query 72 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGG 131
|||| |||||||| ||| | |||||||| ||| | | | | || || |||||||||
Sbjct 5177 TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGGG 5119
Query 132 CTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCT 191
| ||| ||||| || ||||||||| ||| | ||||| | || || |
Sbjct 5118 AACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTAT 5063
Query 192 AGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGA 251
||| |||| | |||||||| ||| || |||| ||||| ||| | | ||||
Sbjct 5062 GGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGA 5003
Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311
|| |||||||| | |||||| | | ||||||| | | || ||||||||||| |||
Sbjct 5002 GGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCC 4943
Query 312 AATCAAAC 319
| || |||
Sbjct 4942 ACTCGAAC 4935
>seq395921
Length=12958
Score = 78.8 bits (86), Expect = 2e-12
Identities = 104/143 (73%), Gaps = 1/143 (1%)
Strand=Plus/Minus
Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251
||| ||||||| |||||| ||| ||||||||||||| || |||| | ||||
Sbjct 9193 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 9134
Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311
|||||||||| | || | ||| | |||||||| | || |||||||||||||||
Sbjct 9133 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 9074
Query 312 AATCAAACTGGGAAATAGCTCGT 334
|| ||| | ||| |||||| ||
Sbjct 9073 AACCAAGATCGGATATAGCTGGT 9051
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 968947468800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |