Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09]
396,025 sequences; 631,307,653 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq396017 125 4e-27
seq196146 107 1e-21
seq139656 89.7 3e-16
seq44610 82.4 4e-14
seq263237 77.0 2e-12
>seq396017
Length=8487
Score = 125 bits (138), Expect = 4e-27
Identities = 98/117 (84%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||||| ||||| | |||||| ||
Sbjct 2799 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTATAAGCAACATCCGCC 2740
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||| |||||||| ||||| |||| |||||| ||||||||||||||||||||||
Sbjct 2739 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 2683
>seq196146
Length=1550
Score = 107 bits (118), Expect = 1e-21
Identities = 94/117 (80%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| ||||||||| ||||| | |||||| |
Sbjct 493 GAACCCAAAAACTTTGATTTCTCATAAGGTGCCAGTGGAGTCCTATAAGCAACATCCGTC 552
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||| || ||||| ||||| |||| |||||| ||||||||||||||||||| ||
Sbjct 553 GATCCCTGGTTGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTTGA 609
>seq139656
Length=992
Score = 89.7 bits (98), Expect = 3e-16
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 2 AACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCG 61
||||| || ||||||||||||| ||||||| || ||||| | |||||| |||
Sbjct 14 AACCCCAAAACTTTGATTTCTCATAAGGTGTTGACAGAGTCCTATAAGCAACATCCACCG 73
Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115
|||| | ||| |||| |||| ||||||||||| ||| ||||||||| | ||||
Sbjct 74 ATCCTTGGTCTGCATCATTTATGGTTAAGACTAGGACAGTATCTGATAGCCTTC 127
>seq44610
Length=2545
Score = 82.4 bits (90), Expect = 4e-14
Identities = 92/119 (77%), Gaps = 3/119 (3%)
Strand=Plus/Plus
Query 1 GAACCCAAAGA-CTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGAT-AACATCGC 58
||||||||| | |||||||||||| |||||||| | ||||| || || ||||||
Sbjct 43 GAACCCAAAAAACTTTGATTTCTCATAAGGTGCGAACAGAGTC-CTATAATCAACATCCT 101
Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
| ||||||||||| ||| ||||| |||| |||||| ||| |||| ||| |||| ||
Sbjct 102 CTAATCCCTAGTCGACATCGTTTATGGTTGAGACTAGGACAACATCTAATCATCTTTGA 160
>seq263237
Length=980
Score = 77.0 bits (84), Expect = 2e-12
Identities = 57/67 (85%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 51 AACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCG 110
|||||| |||| ||| |||||||| ||||| |||| |||| | |||||||||||||||
Sbjct 615 AACATCCATCGATTCCTGGTCGGCATCGTTTATGGTTGAGACGAGGACGGTATCTGATCG 674
Query 111 TCTTCGA 117
|||||||
Sbjct 675 TCTTCGA 681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 277366374750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |