Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09]
396,025 sequences; 631,307,653 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq396017 233 3e-59
seq196146 215 9e-54
seq204053 190 4e-46
seq139656 188 1e-45
seq44610 167 4e-39
seq367070 165 1e-38
seq146673 138 2e-30
seq32353 131 3e-28
seq353571 125 1e-26
seq263237 100 5e-19
seq302386 75.2 2e-11
>seq396017
Length=8487
Score = 233 bits (258), Expect = 3e-59
Identities = 203/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| |||| | ||||||||||||
Sbjct 2436 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 2495
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| || ||||||||
Sbjct 2496 GGGATAACATCATAGGATTT-CGATCCTATTCTGTTGGCCTTCGGGATCGGAGTAATGAT 2554
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 2555 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 2614
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 2615 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 2673
Query 311 GTTAGGGG 318
||| ||||
Sbjct 2674 GTTGGGGG 2681
>seq196146
Length=1550
Score = 215 bits (238), Expect = 9e-54
Identities = 199/248 (80%), Gaps = 3/248 (1%)
Strand=Plus/Minus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| ||| | ||||||||||||
Sbjct 856 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTTTGTATACATTAGCAT 797
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | || | ||||| |||||| | ||| ||||||||
Sbjct 796 GGGATAACATCATAGGATTT-CGATCCTATTCTGTTGGCCTTCGGGATTAGAGTAATGAT 738
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||||||||||||||||||| | ||||| || ||||||||| ||||||||||||||||
Sbjct 737 TAATAGGGATAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTTAAATTCTTGGATTTAT 678
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||| |||||| || |||||||||||||||||||||| ||||||||
Sbjct 677 GAAAGACAAACAACTATGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 619
Query 311 GTTAGGGG 318
||| ||||
Sbjct 618 GTTGGGGG 611
>seq204053
Length=2206
Score = 190 bits (210), Expect = 4e-46
Identities = 194/248 (78%), Gaps = 4/248 (2%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||||| |||| || | ||||||||||||
Sbjct 820 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACACTTTGTATACATTAGCAT 879
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | | | |||||||||||| | |||| | |||||| |
Sbjct 880 GGGATAACATGATAGGATTTT-GATCCTATTTTGTTGGCCTTCAGGATTGGAGTAATGTT 938
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
|||| |||||||| |||| | ||||| || || |||||||||||||||||||||||
Sbjct 939 TAATTAGGATAGTCAGGGGCATTCGTATTTCATAGTTAGAGGTGAAATTCTTGGATTTAT 998
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||| ||||||| || |||| |||||||||||||||| |||| |||
Sbjct 999 CAAAGACGAACAACTACGAAAGCATTTGCCAA-AATGTTTTCATTAATCA-AGAACAAAA 1056
Query 311 GTTAGGGG 318
||| ||||
Sbjct 1057 GTTGGGGG 1064
>seq139656
Length=992
Score = 188 bits (208), Expect = 1e-45
Identities = 191/245 (78%), Gaps = 3/245 (1%)
Strand=Plus/Minus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133
|||||||||| ||||||||||| |||||||| |||| ||||| | ||||||||||||||
Sbjct 373 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTGTATACATTAGCATGGG 314
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
|||| | |||||| | | | |||||||||||| | | ||| | |||||||||||
Sbjct 313 ATAACATCATAGGATTT-CAATCCTATTTTGTTGGCCTTTGGGATCAGAGTAATGATTAA 255
Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253
||||| ||||| ||| | || || || |||| ||||||||||||| ||||||| |
Sbjct 254 CAGGGACAGTCGAGGGCATTCGTTTTTCATAGTCAAAGGTGAAATTCTTAGATTTATGAA 195
Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313
||| ||| ||| |||||| || | ||||||||||||| ||||| |||||||| ||
Sbjct 194 AGATGAACAACTATGAAAGCATTTGACTAGGATGTTTTCATCAATCA-AGAACGAAATTT 136
Query 314 AGGGG 318
||||
Sbjct 135 GGGGG 131
>seq44610
Length=2545
Score = 167 bits (184), Expect = 4e-39
Identities = 187/245 (76%), Gaps = 4/245 (2%)
Strand=Plus/Minus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACATTAGCATGGA 133
|||||||||| ||||||||||| |||||| |||| |||| | ||||| ||||||||
Sbjct 403 TTACTTTGAAGAAATTAGAGTGCCTAAAGCAAGCCTATGCTTTATATACACTAGCATGGG 344
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
|||| | |||||| | | || |||| | |||| | ||||| | |||||||||||
Sbjct 343 ATAACATCATAGGATTTT-GTTTTTATTCTATTGGCCTTTAGGATCAGAGTAATGATTAA 285
Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253
||||| | | ||| | ||||| || |||||||||||||||||||||||||| |
Sbjct 284 CAGGGACGATTGAGGGCTTTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 225
Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313
||| |||| |||| ||||| || |||||||| |||| ||||||| ||| |||||||
Sbjct 224 AGATTAACAGCTGCAAAAGCATTTGCCAAGGAT-ATTTCGTTAATCA-AGAATGAAAGTT 167
Query 314 AGGGG 318
||||
Sbjct 166 GGGGG 162
>seq367070
Length=7107
Score = 165 bits (182), Expect = 1e-38
Identities = 176/230 (77%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||||| | |||| | | | ||||||||||||
Sbjct 2356 CTATTACTTTGAAGAAATTAGAGTGCTCAAAGTAAGCCTACACATTGTATACATTAGCAT 2297
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| ||| || |||||| | | | ||||| | |||| | |||| | |||| ||
Sbjct 2296 GGGATATTATTATAGGATTTT-GATCCTATTCTATTGGCCTTCAGGATCAAAATAATTAT 2238
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| | ||||||||| ||| | |||| || |||| ||||||||||||| |||||||
Sbjct 2237 TAACAAGGATAGTCGAGGGCATTCATATTTCATAGTCAAAGGTGAAATTCTTAGATTTAT 2178
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300
|||| ||| ||||||||||| || ||||||||||||||||||||||
Sbjct 2177 GAAAGATGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA 2128
>seq146673
Length=857
Score = 138 bits (152), Expect = 2e-30
Identities = 153/200 (77%), Gaps = 3/200 (2%)
Strand=Plus/Plus
Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC 178
||||||||||||||||||| | ||| || | | | |||| |||||| | || ||
Sbjct 133 ATACATTAGCATGGAATAACATTATAAGATTTT-GATCTTATTCTGTTGGCCTTTAAGAT 191
Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238
| ||||||||||| ||| | ||||||| | | ||||| || || |||| ||||||
Sbjct 192 TGGAGTAATGATTAACAGG-ACAGTCGGGAGCATTTGTATTTTATAGTGAGAGATGAAAT 250
Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298
| |||||||||| ||||| ||| |||||||||| || ||||||| |||||||||||
Sbjct 251 TTTTGGATTTATGAAAGACGAACAACTGCGAAAGTATTTGTCAAGGATATTTTCATTAAT 310
Query 299 CAGTGAACGAAAGTTAGGGG 318
|| ||||||||||| ||||
Sbjct 311 CA-AGAACGAAAGTTGGGGG 329
>seq32353
Length=4027
Score = 131 bits (144), Expect = 3e-28
Identities = 153/200 (77%), Gaps = 5/200 (3%)
Strand=Plus/Plus
Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC 179
||||||||||||| |||||| |||| | | || | ||||| |||||| || ||| |
Sbjct 2912 TACATTAGCATGGGATAATATCATAGTATTT-CGATCCTATTCTGTTGGCCTCCGGGATC 2970
Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239
| ||||||||||| | | ||||||| ||| |||| | | |||||||||||||||
Sbjct 2971 GAAGTAATGATTAACAATAACAGTCGGGATATTCA-TATTTA-TAGTCAGAGGTGAAATT 3028
Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299
||| ||||||| ||||| ||| ||| ||||||| || |||| ||| |||||||||||
Sbjct 3029 CTTAGATTTATGTAAGACGAACAACTACGAAAGCATTTGCCAAAAATGCTTTCATTAATC 3088
Query 300 AGTGAACGAAAGTT-AGGGG 318
| || ||||||| |||||
Sbjct 3089 A-AAAATGAAAGTTGAGGGG 3107
>seq353571
Length=5323
Score = 125 bits (138), Expect = 1e-26
Identities = 177/243 (73%), Gaps = 7/243 (3%)
Strand=Plus/Plus
Query 77 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGAAT 135
||||||| ||||||||||| | |||||| | | || || | ||| | |||||||||
Sbjct 1286 ACTTTGATTAAATTAGAGTGCTTAAAGCAAGTGTGTTACTTGGATATAAATGCATGGAAT 1345
Query 136 AATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATA 195
|| ||||| | || ||||| ||| |||||||| | || || ||||||| | |
Sbjct 1346 GATGGAATATGTTGTT--GTTCTGTTT-GTTGGTTTTT--GAACGATAAAATGATTGAAA 1400
Query 196 GGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAG 255
|| | || ||||| | ||||| || ||||||||||||||| || |||
Sbjct 1401 GGAACTGTTGGGGGCATTCGTATTGTTGTGAGAGAGGTGAAATTCTTAGACCACAGCAAG 1460
Query 256 ACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315
|| ||||||||||||||| || ||||| ||||||||||| |||| |||||||||||||
Sbjct 1461 ACGAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTGATCA-AGAACGAAAGTTAG 1519
Query 316 GGG 318
||
Sbjct 1520 AGG 1522
>seq263237
Length=980
Score = 100 bits (110), Expect = 5e-19
Identities = 94/117 (80%), Gaps = 2/117 (2%)
Strand=Plus/Minus
Query 202 GTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAAC 261
|||| ||| | ||||| || ||||||||||||||||||| |||||| |||| |||
Sbjct 798 GTCGAGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGAATTTATGAAAGATGAAC 739
Query 262 TACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT-AGGG 317
| ||||||||| || |||||||||||||||| ||||| |||| |||||| ||||
Sbjct 738 AAGTGCGAAAGCATTTGCCAAGGATGTTTTCATGAATCA-AGAACAAAAGTTGAGGG 683
>seq302386
Length=377
Score = 75.2 bits (82), Expect = 2e-11
Identities = 54/61 (89%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||||
Sbjct 1 AAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGT 59
Query 313 T 313
|
Sbjct 60 T 60
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 911575579200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |