Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq396017 233 3e-59 seq196146 215 9e-54 seq204053 190 4e-46 seq139656 188 1e-45 seq44610 167 4e-39 seq367070 165 1e-38 seq146673 138 2e-30 seq32353 131 3e-28 seq353571 125 1e-26 seq263237 100 5e-19 seq302386 75.2 2e-11 >seq396017 Length=8487 Score = 233 bits (258), Expect = 3e-59 Identities = 203/248 (82%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 2436 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 2495 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | || | ||||| |||||| | ||| || |||||||| Sbjct 2496 GGGATAACATCATAGGATTT-CGATCCTATTCTGTTGGCCTTCGGGATCGGAGTAATGAT 2554 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 2555 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 2614 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 2615 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 2673 Query 311 GTTAGGGG 318 ||| |||| Sbjct 2674 GTTGGGGG 2681 >seq196146 Length=1550 Score = 215 bits (238), Expect = 9e-54 Identities = 199/248 (80%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| ||| | |||||||||||| Sbjct 856 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTTTGTATACATTAGCAT 797 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | || | ||||| |||||| | ||| |||||||| Sbjct 796 GGGATAACATCATAGGATTT-CGATCCTATTCTGTTGGCCTTCGGGATTAGAGTAATGAT 738 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||||||||||||| | ||||| || ||||||||| |||||||||||||||| Sbjct 737 TAATAGGGATAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTTAAATTCTTGGATTTAT 678 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||| |||||| || |||||||||||||||||||||| |||||||| Sbjct 677 GAAAGACAAACAACTATGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 619 Query 311 GTTAGGGG 318 ||| |||| Sbjct 618 GTTGGGGG 611 >seq204053 Length=2206 Score = 190 bits (210), Expect = 4e-46 Identities = 194/248 (78%), Gaps = 4/248 (2%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| || | |||||||||||| Sbjct 820 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACACTTTGTATACATTAGCAT 879 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | | | |||||||||||| | |||| | |||||| | Sbjct 880 GGGATAACATGATAGGATTTT-GATCCTATTTTGTTGGCCTTCAGGATTGGAGTAATGTT 938 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 |||| |||||||| |||| | ||||| || || ||||||||||||||||||||||| Sbjct 939 TAATTAGGATAGTCAGGGGCATTCGTATTTCATAGTTAGAGGTGAAATTCTTGGATTTAT 998 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||| ||||||| || |||| |||||||||||||||| |||| ||| Sbjct 999 CAAAGACGAACAACTACGAAAGCATTTGCCAA-AATGTTTTCATTAATCA-AGAACAAAA 1056 Query 311 GTTAGGGG 318 ||| |||| Sbjct 1057 GTTGGGGG 1064 >seq139656 Length=992 Score = 188 bits (208), Expect = 1e-45 Identities = 191/245 (78%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| |||| ||||| | |||||||||||||| Sbjct 373 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTGTATACATTAGCATGGG 314 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | | | |||||||||||| | | ||| | ||||||||||| Sbjct 313 ATAACATCATAGGATTT-CAATCCTATTTTGTTGGCCTTTGGGATCAGAGTAATGATTAA 255 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 ||||| ||||| ||| | || || || |||| ||||||||||||| ||||||| | Sbjct 254 CAGGGACAGTCGAGGGCATTCGTTTTTCATAGTCAAAGGTGAAATTCTTAGATTTATGAA 195 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 ||| ||| ||| |||||| || | ||||||||||||| ||||| |||||||| || Sbjct 194 AGATGAACAACTATGAAAGCATTTGACTAGGATGTTTTCATCAATCA-AGAACGAAATTT 136 Query 314 AGGGG 318 |||| Sbjct 135 GGGGG 131 >seq44610 Length=2545 Score = 167 bits (184), Expect = 4e-39 Identities = 187/245 (76%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||| |||| |||| | ||||| |||||||| Sbjct 403 TTACTTTGAAGAAATTAGAGTGCCTAAAGCAAGCCTATGCTTTATATACACTAGCATGGG 344 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | | || |||| | |||| | ||||| | ||||||||||| Sbjct 343 ATAACATCATAGGATTTT-GTTTTTATTCTATTGGCCTTTAGGATCAGAGTAATGATTAA 285 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 ||||| | | ||| | ||||| || |||||||||||||||||||||||||| | Sbjct 284 CAGGGACGATTGAGGGCTTTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 225 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 ||| |||| |||| ||||| || |||||||| |||| ||||||| ||| ||||||| Sbjct 224 AGATTAACAGCTGCAAAAGCATTTGCCAAGGAT-ATTTCGTTAATCA-AGAATGAAAGTT 167 Query 314 AGGGG 318 |||| Sbjct 166 GGGGG 162 >seq367070 Length=7107 Score = 165 bits (182), Expect = 1e-38 Identities = 176/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||| | |||| | | | |||||||||||| Sbjct 2356 CTATTACTTTGAAGAAATTAGAGTGCTCAAAGTAAGCCTACACATTGTATACATTAGCAT 2297 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || ||| || |||||| | | | ||||| | |||| | |||| | |||| || Sbjct 2296 GGGATATTATTATAGGATTTT-GATCCTATTCTATTGGCCTTCAGGATCAAAATAATTAT 2238 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| | ||||||||| ||| | |||| || |||| ||||||||||||| ||||||| Sbjct 2237 TAACAAGGATAGTCGAGGGCATTCATATTTCATAGTCAAAGGTGAAATTCTTAGATTTAT 2178 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 |||| ||| ||||||||||| || |||||||||||||||||||||| Sbjct 2177 GAAAGATGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA 2128 >seq146673 Length=857 Score = 138 bits (152), Expect = 2e-30 Identities = 153/200 (77%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC 178 ||||||||||||||||||| | ||| || | | | |||| |||||| | || || Sbjct 133 ATACATTAGCATGGAATAACATTATAAGATTTT-GATCTTATTCTGTTGGCCTTTAAGAT 191 Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238 | ||||||||||| ||| | ||||||| | | ||||| || || |||| |||||| Sbjct 192 TGGAGTAATGATTAACAGG-ACAGTCGGGAGCATTTGTATTTTATAGTGAGAGATGAAAT 250 Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 | |||||||||| ||||| ||| |||||||||| || ||||||| ||||||||||| Sbjct 251 TTTTGGATTTATGAAAGACGAACAACTGCGAAAGTATTTGTCAAGGATATTTTCATTAAT 310 Query 299 CAGTGAACGAAAGTTAGGGG 318 || ||||||||||| |||| Sbjct 311 CA-AGAACGAAAGTTGGGGG 329 >seq32353 Length=4027 Score = 131 bits (144), Expect = 3e-28 Identities = 153/200 (77%), Gaps = 5/200 (3%) Strand=Plus/Plus Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC 179 ||||||||||||| |||||| |||| | | || | ||||| |||||| || ||| | Sbjct 2912 TACATTAGCATGGGATAATATCATAGTATTT-CGATCCTATTCTGTTGGCCTCCGGGATC 2970 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 | ||||||||||| | | ||||||| ||| |||| | | ||||||||||||||| Sbjct 2971 GAAGTAATGATTAACAATAACAGTCGGGATATTCA-TATTTA-TAGTCAGAGGTGAAATT 3028 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 ||| ||||||| ||||| ||| ||| ||||||| || |||| ||| ||||||||||| Sbjct 3029 CTTAGATTTATGTAAGACGAACAACTACGAAAGCATTTGCCAAAAATGCTTTCATTAATC 3088 Query 300 AGTGAACGAAAGTT-AGGGG 318 | || ||||||| ||||| Sbjct 3089 A-AAAATGAAAGTTGAGGGG 3107 >seq353571 Length=5323 Score = 125 bits (138), Expect = 1e-26 Identities = 177/243 (73%), Gaps = 7/243 (3%) Strand=Plus/Plus Query 77 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGAAT 135 ||||||| ||||||||||| | |||||| | | || || | ||| | ||||||||| Sbjct 1286 ACTTTGATTAAATTAGAGTGCTTAAAGCAAGTGTGTTACTTGGATATAAATGCATGGAAT 1345 Query 136 AATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATA 195 || ||||| | || ||||| ||| |||||||| | || || ||||||| | | Sbjct 1346 GATGGAATATGTTGTT--GTTCTGTTT-GTTGGTTTTT--GAACGATAAAATGATTGAAA 1400 Query 196 GGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAG 255 || | || ||||| | ||||| || ||||||||||||||| || ||| Sbjct 1401 GGAACTGTTGGGGGCATTCGTATTGTTGTGAGAGAGGTGAAATTCTTAGACCACAGCAAG 1460 Query 256 ACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315 || ||||||||||||||| || ||||| ||||||||||| |||| ||||||||||||| Sbjct 1461 ACGAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTGATCA-AGAACGAAAGTTAG 1519 Query 316 GGG 318 || Sbjct 1520 AGG 1522 >seq263237 Length=980 Score = 100 bits (110), Expect = 5e-19 Identities = 94/117 (80%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 202 GTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAAC 261 |||| ||| | ||||| || ||||||||||||||||||| |||||| |||| ||| Sbjct 798 GTCGAGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGAATTTATGAAAGATGAAC 739 Query 262 TACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT-AGGG 317 | ||||||||| || |||||||||||||||| ||||| |||| |||||| |||| Sbjct 738 AAGTGCGAAAGCATTTGCCAAGGATGTTTTCATGAATCA-AGAACAAAAGTTGAGGG 683 >seq302386 Length=377 Score = 75.2 bits (82), Expect = 2e-11 Identities = 54/61 (89%), Gaps = 1/61 (2%) Strand=Plus/Plus Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||||| Sbjct 1 AAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGT 59 Query 313 T 313 | Sbjct 60 T 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 911575579200