Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq304107 147 2e-33 seq295240 77.0 3e-12 >seq304107 Length=380 Score = 147 bits (162), Expect = 2e-33 Identities = 143/181 (79%), Gaps = 5/181 (3%) Strand=Plus/Minus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| | || |||||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct 378 GGCACATGGGGGATGCCTAGGCTCTCAGAGGCGATGAAGGACGTGATAAGCTGCGAAAAG 319 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATA 120 | ||||| ||| ||| ||||||||| |||||||||||||||||||||| | Sbjct 318 CCGTGGGGAGGAGCAAATATCCATTGATCCGCGGATATCCGAATGGGGCAACCCGGCA-G 260 Query 121 TTGGAGAT-ATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGT 179 | |||| | ||| | || ||| | || |||| ||||||||||||||||||||| Sbjct 259 GAGAAGATCCTGTCACACCGTAAGG---TGAGCAAACGCGGGGAACTGAAACATCTAAGT 203 Query 180 A 180 | Sbjct 202 A 202 >seq295240 Length=389 Score = 77.0 bits (84), Expect = 3e-12 Identities = 87/110 (79%), Gaps = 5/110 (5%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAG-CTGCGAAAAGCTACGG 66 ||||||||||| ||| | ||||||||||||||||| |||| ||||||||||| || Sbjct 182 GGTGGATGCCTTGGCGATGATAGGCGAAGAAGGACGTG-TAAGCCTGCGAAAAGCGTGGG 240 Query 67 GGA-TTGGCACATA-CGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 ||| ||||| ||| | |||||| ||||||||||||||| ||||| Sbjct 241 GGAGCTGGCA-ATAGAGCTGTGATCCCGCGATATCCGAATGGGGAAACCC 289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474970760525