Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq208571 206 3e-51 seq395726 93.3 4e-17 seq261754 87.8 2e-15 seq395921 86.0 7e-15 seq135216 84.2 2e-14 >seq208571 Length=511 Score = 206 bits (228), Expect = 3e-51 Identities = 151/173 (87%), Gaps = 3/173 (2%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||||||||||||||||||||| ||||||||||||||||| ||| || |||| ||||||| Sbjct 310 AAACGGACACACGTAGTCGGGTAGAATATACTAAGGCGCTCGAGCGATTCACAGTTAAGG 251 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGG 144 || |||||||| ||||||||||||||||||||||||||| || | | | || || || Sbjct 250 AATTAGGCAAAATGACCCTGTAACTTCGGGATAAAGGGTGCC--CGCTGTAA-GGCGGGC 194 Query 145 CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAAT 197 ||||||||||||| |||||||||||||||||||||||| |||||||| ||| Sbjct 193 CGCAGAGAATAGGGGAAGGCAACTGTTTAACAAAAACACATGGCTGTGCAAAT 141 >seq395726 Length=26030 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 4041 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 3984 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 3983 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 3934 >seq261754 Length=1915 Score = 87.8 bits (96), Expect = 2e-15 Identities = 86/110 (78%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||||||||| |||||| || |||| ||| | || ||| || Sbjct 1285 TAAGGAACTTGGCAAAATAGCCCTGTAACATCGGGAGAAGGGGTGCCTCCTCACAAAGGG 1344 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | | || || || |||| | |||||| |||||| ||||||||||| || Sbjct 1345 G--GTCGTAGTGACTAGGCCTAGGCAATTGTTTACTAAAAACACAGGTCT 1392 >seq395921 Length=12958 Score = 86.0 bits (94), Expect = 7e-15 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||| |||||||||| ||| || | ||| Sbjct 7835 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 7776 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| |||||| |||||| |||||||||||| || |||| Sbjct 7775 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 7736 >seq135216 Length=1206 Score = 84.2 bits (92), Expect = 2e-14 Identities = 82/105 (78%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| ||||||| |||| || |||| ||| | || ||| | Sbjct 807 TAAGGAACTTGGCAAAATAGCCCCGTAACTTTGGGAGAAGGGGTGCCTCCTCACAAAAAG 748 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACA 184 | | || || || ||||||||||| |||||||| |||||| ||| Sbjct 747 G--GTCGTAGTGACTAGGTCCAGGCGACTGTTTACCAAAAATACA 705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529162055350