Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq396017 300 2e-79 seq196146 273 3e-71 seq146673 262 6e-68 seq268542 260 2e-67 seq383268 224 2e-56 seq353571 217 2e-54 seq204053 215 8e-54 seq32353 187 4e-45 seq367070 140 5e-31 seq90465 111 2e-22 seq373517 109 9e-22 seq370215 105 1e-20 >seq396017 Length=8487 Score = 300 bits (332), Expect = 2e-79 Identities = 225/261 (86%), Gaps = 6/261 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3185 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 3126 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||||| | | || |||| | |||||||||||||||||| | Sbjct 3125 CCTGTTATTGCCTCAAACTTCCTTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 3068 Query 120 CCACCAACCATAGTCGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || | | || | | |||| |||||||| | ||||||||||||||| ||||| Sbjct 3067 CCGCGGAGGGTATCCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 3008 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 3007 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 2948 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| |||||||||| Sbjct 2947 AGAAAGAGCTCTCAATCTGTC 2927 >seq196146 Length=1550 Score = 273 bits (302), Expect = 3e-71 Identities = 219/261 (84%), Gaps = 6/261 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 107 ACTCGTTGAATACATCAGTGTAGCACGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 166 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 ||| |||||||| ||||||||| | | || |||| | | |||||||||||||||| | Sbjct 167 CCTATTATTGCCACAAACTTCCTTGGCCT--AAGCGGCCACAGTCCCTCTAAGAAGCTGG 224 Query 120 CCACCAACCATAGTCGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 ||| || || | || |||| |||||||| | |||||| |||||||| ||||| Sbjct 225 TCACGAAGGGTATCCTCTGCATAGCTAGTTAGCAGGCTGAGGTCTTGTTCGTTAACGGAA 284 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct 285 TTAACCAAACAAATCGCTCCACCAACTAAGAACGGCCATGCACCGCCACCCATAGAATCA 344 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| |||| ||||| Sbjct 345 AGAAAGAGCTCTCAAACTGTC 365 >seq146673 Length=857 Score = 262 bits (290), Expect = 6e-68 Identities = 216/260 (83%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||| || |||||| ||||||||||| ||||||||| Sbjct 842 ACTCGTTGAATACATCAGTGTAGCGCGCTTGTGGCCCAAAACATCTAAGGACATCACAGA 783 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCA--ATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||||| | | || |||| | ||||||||||||||||| | Sbjct 782 CCTGTTATTGCCTCAAACTTCCTTGGCCT--AAGCGACCATAGTCCCTCTAAGAAGTTGG 725 Query 120 CCACCAACCATAGTCGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || || || | | |||| |||||||||| ||||||||||||||| | ||| Sbjct 724 CCGTGAAGGGTATCCTCCGCATAGCTAGTTAGCAGGTTGAGGTCTCGTTCGTTAACAGAA 665 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct 664 TTAACAAGACAAATCGCTCCACCAACTAAAAACGGCCATGCACCACCACCCATAGAATCA 605 Query 238 AGAAAGAGCTATCAATCTGT 257 ||||||||| ||||||||| Sbjct 604 TGAAAGAGCTCTCAATCTGT 585 >seq268542 Length=539 Score = 260 bits (288), Expect = 2e-67 Identities = 216/260 (83%), Gaps = 4/260 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | ||| |||||||| |||| |||||| ||||||||||||||||||||| Sbjct 271 ACTCGTTGAATACATCAATGTAGCGCACGTGTGGCCCAAAACATCTAAGGGCATCACAGA 330 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTG-GAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 | ||||||||||||||||||| | | || | ||||| || |||||||||||||| | Sbjct 331 CTAGTTATTGCCTCAAACTTCCTTGGCCTAAGCAGCCA-TAATCCCTCTAAGAAGCTGGT 389 Query 121 CACCAACCATAGTCGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 | | | || | | ||||||||||||| | ||||||| || |||| |||||| Sbjct 390 CGCGGAGGGTATCCTCCGCATAGCTATTTAGCAGGCTGAGGTCTCATTAGTTAACGGAAT 449 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 450 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCATCACCCATAGAATCAA 509 Query 239 GAAAGAGCTATCAATCTGTC 258 ||||||||| |||||||||| Sbjct 510 GAAAGAGCTCTCAATCTGTC 529 >seq383268 Length=8310 Score = 224 bits (248), Expect = 2e-56 Identities = 199/246 (81%), Gaps = 6/246 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | ||||||| || ||||||| |||||||||||||||||||||| ||| Sbjct 7165 ACTCGTTGAATACATCAGTGTTGCACGCGTGCAACCCAGAACATCTAAGGGCATCATAGA 7224 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 ||| ||||||||| |||||||| | | || |||| | ||||| |||||||||||| | Sbjct 7225 CCTATTATTGCCTTAAACTTCCTTGGCCT--AAGCGGCCATAGTACCTCTAAGAAGCTGG 7282 Query 120 CCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 |||| | || || | |||| |||||||| | |||||| ||||||| || || Sbjct 7283 CCACGGAGGGTATCCTCCGTATAGCTAGTTAGCAGGCTGAGGTCTTATTCGTTAACGAAA 7342 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 7343 TTAACCATACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACATATAGAATCA 7402 Query 238 AGAAAG 243 || ||| Sbjct 7403 AGGAAG 7408 >seq353571 Length=5323 Score = 217 bits (240), Expect = 2e-54 Identities = 199/245 (81%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct 2004 TCAATGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTGC-TC 1946 Query 76 AAACTTCCATTGGCTGGAAGCCAATAG-TCCCTCTAAGAAGCCAGCCACCA-ACCATAGT 133 || || | | || || | | |||| |||||| | || | || | | | Sbjct 1945 TG--TTTCAAAGCGTTAAACACACTTGATCCCATTAAGAAACACCACAGAAGACGAGATT 1888 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | || | |||||| ||| || ||||||||||||||||||||||||||||||||||| Sbjct 1887 CTGTGTGT-TATTTAATAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 1829 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct 1828 CTCCACCAACTAAGAACGGCCATGCACCACCATCCACCAAATCAAGAAAGAGCTATCAAT 1769 Query 254 CTGTC 258 ||||| Sbjct 1768 CTGTC 1764 >seq204053 Length=2206 Score = 215 bits (238), Expect = 8e-54 Identities = 207/261 (79%), Gaps = 6/261 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | | ||| ||||||||| | |||||||||||| ||||||||||||||| Sbjct 1568 ACTCGTTGAATACATTAGTTTAGCGCGCGAGTGGCCCAGAACATATAAGGGCATCACAGA 1509 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAGCCAG 119 | |||||| ||||||||||||| ||||| | ||||| ||||||||||||||||| || Sbjct 1508 CTTGTTATAGCCTCAAACTTCC-TTGGCCAAAGCAGCCA-TAGTCCCTCTAAGAAGCTAG 1451 Query 120 CCACCAACCATAGTCGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 ||| | || | || |||| |||||||| | |||||| ||| ||| | || Sbjct 1450 CCATGGAGGCTACCCTTTGCATAGCTAGTTAGCAGGCTGAGGTCTTGTTGTTTAACAAAA 1391 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||| |||||||| |||| ||||||||||| ||||| |||||||||||||||||||| Sbjct 1390 TTAACTAGACAAATTGCTCCGCCAACTAAGAATAGCCATCCACCACCACCCATAGAATCA 1331 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| || | |||| Sbjct 1330 AGAAAGAGCTCACAGTTTGTC 1310 >seq32353 Length=4027 Score = 187 bits (206), Expect = 4e-45 Identities = 189/245 (77%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||| | ||||||||| |||||||||||||||||||||| ||||||| ||| Sbjct 3589 TCAATGTAGCGCACATGCGGCCCAAAACATCTAAGGGCATCACAGACATGTTATTATCTC 3530 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG 135 ||||||| | | || | ||| | ||||||||| | || | || | Sbjct 3529 AAACTTCGTTAGCCTAAGTGGTCATAATTCCTCTAAGACGTTGGCTGTGGAGGGTATGCT 3470 Query 136 ATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | |||| |||||||| | | ||||| ||||||| | |||||||| ||||||||| Sbjct 3469 CAGCATAGCTAGTTAGCAGGCTGAAGTCTCATTCGTTAACAGAATTAACTAGACAAATCG 3410 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 ||||| ||||||||||| ||||||||| |||||||||||||||||||||||||| | | | Sbjct 3409 CTCCATCAACTAAGAACAGCCATGCACTACCACCCATAGAATCAAGAAAGAGCTCTTAGT 3350 Query 254 CTGTC 258 ||||| Sbjct 3349 CTGTC 3345 >seq367070 Length=7107 Score = 140 bits (154), Expect = 5e-31 Identities = 101/117 (86%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 141 GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200 |||| |||| | ||| ||||||| || |||| | |||||||| ||||||||| ||||||| Sbjct 1748 GCTAGTTAGTAAGTTGAGGTCTCATTTGTTAACAGAATTAACTAGACAAATCGCTCCACC 1807 Query 201 AACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257 |||||| ||| || |||||||| |||||||||||||||||||||||| ||| ||||| Sbjct 1808 AACTAACAACTGCTATGCACCATCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGT 1864 >seq90465 Length=2101 Score = 111 bits (122), Expect = 2e-22 Identities = 78/88 (89%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||| || |||||| ||||||||||| ||||||||| Sbjct 94 ACTCGTTGAATACATCAGTGTAGCGCGCTTGTGGCCCAAAACATCTAAGGACATCACAGA 35 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGC 89 |||||||||||||||||||||| ||||| Sbjct 34 CCTGTTATTGCCTCAAACTTCC-TTGGC 8 >seq373517 Length=243 Score = 109 bits (120), Expect = 9e-22 Identities = 92/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 |||| | || ||||||| || | || | |||| || | ||||| |||||||||||| Sbjct 14 TTAGTAAATTGAGGTCTCTTTTGCTAACAAAATTCACTAAGCAAATTGCTCCACCAACTA 73 Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| ||||| ||||||||||||||||||||||||||||| | | |||||| Sbjct 74 AGAACGACCATGTACCACCACCCATAGAATCAAGAAAGAGCTCTTAGTCTGTC 126 >seq370215 Length=5228 Score = 105 bits (116), Expect = 1e-20 Identities = 94/116 (81%), Gaps = 4/116 (3%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | ||| ||||| || |||| ||| || |||||||||||||||| ||| Sbjct 114 ACTCGTTGAATTCATCAATGTAGTGCACGTGTGGCTTAGCACATCTAAGGGCATCATAGA 55 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAG 115 ||| |||||||||||||||||| | | || |||| | ||||||||||||||||| Sbjct 54 CCTATTATTGCCTCAAACTTCCTTGGCCT--AAGCTGCCATAGTCCCTCTAAGAAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793743083025