Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09]
396,025 sequences; 631,307,653 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq396017 300 2e-79
seq196146 273 3e-71
seq146673 262 6e-68
seq268542 260 2e-67
seq383268 224 2e-56
seq353571 217 2e-54
seq204053 215 8e-54
seq32353 187 4e-45
seq367070 140 5e-31
seq90465 111 2e-22
seq373517 109 9e-22
seq370215 105 1e-20
>seq396017
Length=8487
Score = 300 bits (332), Expect = 2e-79
Identities = 225/261 (86%), Gaps = 6/261 (2%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3185 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 3126
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119
|||||||||||||||||||||| | | || |||| | |||||||||||||||||| |
Sbjct 3125 CCTGTTATTGCCTCAAACTTCCTTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 3068
Query 120 CCACCAACCATAGTCGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177
|| | | || | | |||| |||||||| | ||||||||||||||| |||||
Sbjct 3067 CCGCGGAGGGTATCCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 3008
Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3007 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 2948
Query 238 AGAAAGAGCTATCAATCTGTC 258
|||||||||| ||||||||||
Sbjct 2947 AGAAAGAGCTCTCAATCTGTC 2927
>seq196146
Length=1550
Score = 273 bits (302), Expect = 3e-71
Identities = 219/261 (84%), Gaps = 6/261 (2%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 107 ACTCGTTGAATACATCAGTGTAGCACGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 166
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119
||| |||||||| ||||||||| | | || |||| | | |||||||||||||||| |
Sbjct 167 CCTATTATTGCCACAAACTTCCTTGGCCT--AAGCGGCCACAGTCCCTCTAAGAAGCTGG 224
Query 120 CCACCAACCATAGTCGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177
||| || || | || |||| |||||||| | |||||| |||||||| |||||
Sbjct 225 TCACGAAGGGTATCCTCTGCATAGCTAGTTAGCAGGCTGAGGTCTTGTTCGTTAACGGAA 284
Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237
||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 285 TTAACCAAACAAATCGCTCCACCAACTAAGAACGGCCATGCACCGCCACCCATAGAATCA 344
Query 238 AGAAAGAGCTATCAATCTGTC 258
|||||||||| |||| |||||
Sbjct 345 AGAAAGAGCTCTCAAACTGTC 365
>seq146673
Length=857
Score = 262 bits (290), Expect = 6e-68
Identities = 216/260 (83%), Gaps = 6/260 (2%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | |||||||||||||| || |||||| ||||||||||| |||||||||
Sbjct 842 ACTCGTTGAATACATCAGTGTAGCGCGCTTGTGGCCCAAAACATCTAAGGACATCACAGA 783
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCA--ATAGTCCCTCTAAGAAGCCAG 119
|||||||||||||||||||||| | | || |||| | ||||||||||||||||| |
Sbjct 782 CCTGTTATTGCCTCAAACTTCCTTGGCCT--AAGCGACCATAGTCCCTCTAAGAAGTTGG 725
Query 120 CCACCAACCATAGTCGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177
|| || || | | |||| |||||||||| ||||||||||||||| | |||
Sbjct 724 CCGTGAAGGGTATCCTCCGCATAGCTAGTTAGCAGGTTGAGGTCTCGTTCGTTAACAGAA 665
Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237
||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 664 TTAACAAGACAAATCGCTCCACCAACTAAAAACGGCCATGCACCACCACCCATAGAATCA 605
Query 238 AGAAAGAGCTATCAATCTGT 257
||||||||| |||||||||
Sbjct 604 TGAAAGAGCTCTCAATCTGT 585
>seq268542
Length=539
Score = 260 bits (288), Expect = 2e-67
Identities = 216/260 (83%), Gaps = 4/260 (2%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||| |||||||| |||| |||||| |||||||||||||||||||||
Sbjct 271 ACTCGTTGAATACATCAATGTAGCGCACGTGTGGCCCAAAACATCTAAGGGCATCACAGA 330
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTG-GAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
| ||||||||||||||||||| | | || | ||||| || |||||||||||||| |
Sbjct 331 CTAGTTATTGCCTCAAACTTCCTTGGCCTAAGCAGCCA-TAATCCCTCTAAGAAGCTGGT 389
Query 121 CACCAACCATAGTCGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
| | | || | | ||||||||||||| | ||||||| || |||| ||||||
Sbjct 390 CGCGGAGGGTATCCTCCGCATAGCTATTTAGCAGGCTGAGGTCTCATTAGTTAACGGAAT 449
Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 450 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCATCACCCATAGAATCAA 509
Query 239 GAAAGAGCTATCAATCTGTC 258
||||||||| ||||||||||
Sbjct 510 GAAAGAGCTCTCAATCTGTC 529
>seq383268
Length=8310
Score = 224 bits (248), Expect = 2e-56
Identities = 199/246 (81%), Gaps = 6/246 (2%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||| || ||||||| |||||||||||||||||||||| |||
Sbjct 7165 ACTCGTTGAATACATCAGTGTTGCACGCGTGCAACCCAGAACATCTAAGGGCATCATAGA 7224
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119
||| ||||||||| |||||||| | | || |||| | ||||| |||||||||||| |
Sbjct 7225 CCTATTATTGCCTTAAACTTCCTTGGCCT--AAGCGGCCATAGTACCTCTAAGAAGCTGG 7282
Query 120 CCACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177
|||| | || || | |||| |||||||| | |||||| ||||||| || ||
Sbjct 7283 CCACGGAGGGTATCCTCCGTATAGCTAGTTAGCAGGCTGAGGTCTTATTCGTTAACGAAA 7342
Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237
||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 7343 TTAACCATACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACATATAGAATCA 7402
Query 238 AGAAAG 243
|| |||
Sbjct 7403 AGGAAG 7408
>seq353571
Length=5323
Score = 217 bits (240), Expect = 2e-54
Identities = 199/245 (81%), Gaps = 6/245 (2%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 2004 TCAATGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTGC-TC 1946
Query 76 AAACTTCCATTGGCTGGAAGCCAATAG-TCCCTCTAAGAAGCCAGCCACCA-ACCATAGT 133
|| || | | || || | | |||| |||||| | || | || | | |
Sbjct 1945 TG--TTTCAAAGCGTTAAACACACTTGATCCCATTAAGAAACACCACAGAAGACGAGATT 1888
Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193
| || | |||||| ||| || |||||||||||||||||||||||||||||||||||
Sbjct 1887 CTGTGTGT-TATTTAATAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 1829
Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct 1828 CTCCACCAACTAAGAACGGCCATGCACCACCATCCACCAAATCAAGAAAGAGCTATCAAT 1769
Query 254 CTGTC 258
|||||
Sbjct 1768 CTGTC 1764
>seq204053
Length=2206
Score = 215 bits (238), Expect = 8e-54
Identities = 207/261 (79%), Gaps = 6/261 (2%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | | ||| ||||||||| | |||||||||||| |||||||||||||||
Sbjct 1568 ACTCGTTGAATACATTAGTTTAGCGCGCGAGTGGCCCAGAACATATAAGGGCATCACAGA 1509
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAGCCAG 119
| |||||| ||||||||||||| ||||| | ||||| ||||||||||||||||| ||
Sbjct 1508 CTTGTTATAGCCTCAAACTTCC-TTGGCCAAAGCAGCCA-TAGTCCCTCTAAGAAGCTAG 1451
Query 120 CCACCAACCATAGTCGATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177
||| | || | || |||| |||||||| | |||||| ||| ||| | ||
Sbjct 1450 CCATGGAGGCTACCCTTTGCATAGCTAGTTAGCAGGCTGAGGTCTTGTTGTTTAACAAAA 1391
Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237
||||| |||||||| |||| ||||||||||| ||||| ||||||||||||||||||||
Sbjct 1390 TTAACTAGACAAATTGCTCCGCCAACTAAGAATAGCCATCCACCACCACCCATAGAATCA 1331
Query 238 AGAAAGAGCTATCAATCTGTC 258
|||||||||| || | ||||
Sbjct 1330 AGAAAGAGCTCACAGTTTGTC 1310
>seq32353
Length=4027
Score = 187 bits (206), Expect = 4e-45
Identities = 189/245 (77%), Gaps = 2/245 (1%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||| |||||||| | ||||||||| |||||||||||||||||||||| ||||||| |||
Sbjct 3589 TCAATGTAGCGCACATGCGGCCCAAAACATCTAAGGGCATCACAGACATGTTATTATCTC 3530
Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG 135
||||||| | | || | ||| | ||||||||| | || | || |
Sbjct 3529 AAACTTCGTTAGCCTAAGTGGTCATAATTCCTCTAAGACGTTGGCTGTGGAGGGTATGCT 3470
Query 136 ATGGG--GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193
| |||| |||||||| | | ||||| ||||||| | |||||||| |||||||||
Sbjct 3469 CAGCATAGCTAGTTAGCAGGCTGAAGTCTCATTCGTTAACAGAATTAACTAGACAAATCG 3410
Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
||||| ||||||||||| ||||||||| |||||||||||||||||||||||||| | | |
Sbjct 3409 CTCCATCAACTAAGAACAGCCATGCACTACCACCCATAGAATCAAGAAAGAGCTCTTAGT 3350
Query 254 CTGTC 258
|||||
Sbjct 3349 CTGTC 3345
>seq367070
Length=7107
Score = 140 bits (154), Expect = 5e-31
Identities = 101/117 (86%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 141 GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200
|||| |||| | ||| ||||||| || |||| | |||||||| ||||||||| |||||||
Sbjct 1748 GCTAGTTAGTAAGTTGAGGTCTCATTTGTTAACAGAATTAACTAGACAAATCGCTCCACC 1807
Query 201 AACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257
|||||| ||| || |||||||| |||||||||||||||||||||||| ||| |||||
Sbjct 1808 AACTAACAACTGCTATGCACCATCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGT 1864
>seq90465
Length=2101
Score = 111 bits (122), Expect = 2e-22
Identities = 78/88 (89%), Gaps = 1/88 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | |||||||||||||| || |||||| ||||||||||| |||||||||
Sbjct 94 ACTCGTTGAATACATCAGTGTAGCGCGCTTGTGGCCCAAAACATCTAAGGACATCACAGA 35
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGC 89
|||||||||||||||||||||| |||||
Sbjct 34 CCTGTTATTGCCTCAAACTTCC-TTGGC 8
>seq373517
Length=243
Score = 109 bits (120), Expect = 9e-22
Identities = 92/113 (81%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205
|||| | || ||||||| || | || | |||| || | ||||| ||||||||||||
Sbjct 14 TTAGTAAATTGAGGTCTCTTTTGCTAACAAAATTCACTAAGCAAATTGCTCCACCAACTA 73
Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||| ||||| ||||||||||||||||||||||||||||| | | ||||||
Sbjct 74 AGAACGACCATGTACCACCACCCATAGAATCAAGAAAGAGCTCTTAGTCTGTC 126
>seq370215
Length=5228
Score = 105 bits (116), Expect = 1e-20
Identities = 94/116 (81%), Gaps = 4/116 (3%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||| ||||| || |||| ||| || |||||||||||||||| |||
Sbjct 114 ACTCGTTGAATTCATCAATGTAGTGCACGTGTGGCTTAGCACATCTAAGGGCATCATAGA 55
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAG 115
||| |||||||||||||||||| | | || |||| | |||||||||||||||||
Sbjct 54 CCTATTATTGCCTCAAACTTCCTTGGCCT--AAGCTGCCATAGTCCCTCTAAGAAG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 793743083025
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |