Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09]
396,025 sequences; 631,307,653 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq395726 219 8e-55
seq231982 192 1e-46
seq192414 161 2e-37
seq48036 159 7e-37
seq213916 158 2e-36
seq322062 145 2e-32
seq376176 143 5e-32
seq164005 141 2e-31
seq395746 136 8e-30
seq200207 116 7e-24
seq385033 114 3e-23
seq296370 111 3e-22
seq81729 104 5e-20
seq237345 102 2e-19
seq206237 86.0 1e-14
>seq395726
Length=26030
Score = 219 bits (242), Expect = 8e-55
Identities = 233/305 (76%), Gaps = 18/305 (6%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| | ||||| |||| ||||||| | || || |||||||||||||||||||||
Sbjct 9275 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 9334
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| |||
Sbjct 9335 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 9394
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
| ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || |
Sbjct 9395 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 9454
Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239
|| ||| || || ||| ||||| | | || | |||||||||
Sbjct 9455 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 9498
Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299
|||||||| ||| |||| ||| || |||||||| || ||| ||||||||||||||||
Sbjct 9499 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 9557
Query 300 CCACT 304
|||||
Sbjct 9558 CCACT 9562
>seq231982
Length=852
Score = 192 bits (212), Expect = 1e-46
Identities = 231/312 (74%), Gaps = 19/312 (6%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | |||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 531 GGCATGGCTGCATCAGGGTTCCCCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 590
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|||||||| |||||||||||| ||| |||||| | ||| |||||||| || |||| |||
Sbjct 591 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGAGAT 650
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCT---T 177
||||| |||||| || |||| | |||||||| ||||| ||||| | |
Sbjct 651 CGTCGCCTTGGTAAGCCATTACCCTACCAACTAGCTAAT----------CCCATATGGGT 700
Query 178 TCAGCGATAAATCTTTGGTC--AAAGAATGATGCCATCCTCT---GACATTATGCGGTAT 232
||| ||| ||| | |||| |||| | ||| || |||||||||||
Sbjct 701 TCATCGAATGGCGCATGGCCCGAAAGTCCCATGCTTTGGTCTCTCAACTTTATGCGGTAT 760
Query 233 TAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCAC 292
|||| |||||||||| ||| | || ||| |||| | | | || ||||||||
Sbjct 761 TAGCAGTCGTTTCCAACTGTTGTCCCCCTCCATTCGGCA-GATCCCCATACTTTACTCAC 819
Query 293 CCGTCCGCCACT 304
||||||||||||
Sbjct 820 CCGTCCGCCACT 831
>seq192414
Length=2565
Score = 161 bits (178), Expect = 2e-37
Identities = 218/300 (73%), Gaps = 19/300 (6%)
Strand=Plus/Plus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
||| | ||||| ||| ||||||| || || ||||||||||||||||| |||||||||
Sbjct 1588 GCTCCGTCAGGCTTTTACCCATTGCAAAAAATTCCCCACTGCTGCCTCCCATAGGAGTCT 1647
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
|||| |||||| ||||| | ||||| | ||| |||||||| || ||||| |||| |||
Sbjct 1648 GGGC-GTGTCTTAGTCCTAGTGTGGTTGATCATCCTCTCAGACCAGCTACTGATCATCGC 1706
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAG-CGAT 185
|||||| ||||||| ||||||||||| |||||| | ||||| ||| || | | |||
Sbjct 1707 CTTGGTAGGCTATTGCCTCACCAACTAGCTAATCAGACGCGAACCCCTCCTCGGGTGGAT 1766
Query 186 AAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTC 245
|| || ||| ||||| | | || ||||||||| | ||||
Sbjct 1767 TCCTCCTT------------TTGC--TCCTCAGCC--TACAGGGTATTAGCTACCATTTC 1810
Query 246 CAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTA 305
||| ||| ||| ||| || || ||||| || ||| |||||||||||| ||||||||
Sbjct 1811 CAACTGTTGCTCCCCTCCCAAGGGTAGGTT-CTTACGCATTACTCACCCGTTCGCCACTA 1869
>seq48036
Length=1819
Score = 159 bits (176), Expect = 7e-37
Identities = 138/171 (81%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| | ||||| |||| ||||||| || || |||||||||||||||||||
Sbjct 1457 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCAGAAAATTTTCCACTGCTGCCTCCCGTAG 1398
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|||| |||||| ||||||||||| | |||||| | ||| ||||| || | ||||| |||
Sbjct 1397 GAGTTTGGGCCATGTCTCAGTCCTAGTGTGGCTGATCATCCTCTTAGACTAGCTACTGAT 1338
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCC 171
| ||| |||||| |||||| |||||||||||| |||||| | ||||||||
Sbjct 1337 CATCGCCTTGGTAAGCTATTGTCTCACCAACTAGCTAATCAGACGCGAGCC 1287
>seq213916
Length=1123
Score = 158 bits (174), Expect = 2e-36
Identities = 137/170 (81%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
|||| ||||| | || ||||||| |||||| || ||||||||||||||||||||||||
Sbjct 878 GCTGGTTCAGGCTATCGCCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCT 937
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
|| |||||||||||| ||| ||||| | || |||||||||| | ||| | ||||| |
Sbjct 938 GGTCCGTGTCTCAGTTCCAGTGTGGGGGATCGACCTCTCAGTTCCCCTATCCATCGTTGC 997
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCT 176
||||||| || ||| ||||||||||| ||||| | ||| ||||||||
Sbjct 998 CTTGGTGAGCCGTTACCTCACCAACTAGCTAATGGAACGCATGCCCATCT 1047
>seq322062
Length=3318
Score = 145 bits (160), Expect = 2e-32
Identities = 209/292 (72%), Gaps = 22/292 (8%)
Strand=Plus/Plus
Query 16 GGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGT 75
|| |||| ||||||| || || ||||| |||| |||||||||||||||||||||||||
Sbjct 2211 GGCTTTCGCCCATTGCAGAAAATTCCCCATTGCTACCTCCCGTAGGAGTCTGGGCCGTGT 2270
Query 76 CTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGG 135
|||||||||| |||||| | | |||||| | || ||||| |||| || |||||| |
Sbjct 2271 CTCAGTCCCAGTGTGGCTAATTATCCTCTCGGACCAGCTACTGATCATCACCTTGGTAAG 2330
Query 136 CTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC-GATAAATC--TT 192
|||| ||||||||||| ||| || ||| ||||| || | || ||| || ||
Sbjct 2331 CTATCGCCTCACCAACTAGCTACTCAAACGCAAGCCCTTCCTCTGGCGGATTCCTCCTTT 2390
Query 193 TGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGT 252
| ||| || | ||| |||| ||||||||| |||||||| ||
Sbjct 2391 TAGTC-----ATCA-GCC------------TATGGGGTATTAGCAGCTGTTTCCAATTGT 2432
Query 253 TATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304
| |||| ||| || || ||||| || | | ||||||||||||| ||||||
Sbjct 2433 TGTTCCCCTCCCAAGGGTAGGTT-CTAATGCCTTACTCACCCGTCTGCCACT 2483
>seq376176
Length=1945
Score = 143 bits (158), Expect = 5e-32
Identities = 118/144 (82%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
||| ||||| |||||| ||||||| || || ||||||| |||||||||||||||||||
Sbjct 1802 GCTCCATCAAGGTTTCACCCATTGCAAAAAATTCCCCACTACTGCCTCCCGTAGGAGTCT 1861
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
| ||||||||||||||||| |||||| ||| |||||| || ||||| |||| |||
Sbjct 1862 GTGCCGTGTCTCAGTCCCAGTGTGGCTAATCATCCTCTCGAACCAGCTACTGATCATCGC 1921
Query 127 CTTGGTGGGCTATTATCTCACCAA 150
|||||| |||||| ||||||||
Sbjct 1922 CTTGGTAAGCTATTGCCTCACCAA 1945
>seq164005
Length=1644
Score = 141 bits (156), Expect = 2e-31
Identities = 210/294 (71%), Gaps = 19/294 (6%)
Strand=Plus/Plus
Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72
||||| ||| |||||||| || || | |||||| ||||||||||| |||||||||
Sbjct 1052 TCAGGCGTTCGCCCATTGTAGAAAATTCTCCACTGTTGCCTCCCGTAAGAGTCTGGGATA 1111
Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132
||||||||||| | |||||| | ||| |||||||| || ||||| ||| ||| ||||||
Sbjct 1112 TGTCTCAGTCCTAGTGTGGCTGATCATCCTCTCAGACCAGCTACTAATCATCGCCTTGGT 1171
Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAG-CGATAAATCT 191
|||||| | || |||||| ||||| | || |||||| || || | ||| ||
Sbjct 1172 AAGCTATTGCCCCATCAACTAGCTAATAAGACGTGAGCCCCTCCTTGGGTGGATTCCTCC 1231
Query 192 TTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACG 251
|| ||| ||||| | ||| ||| ||||| |||||||||| |
Sbjct 1232 TT------------TTGC--TCCTC--AGCTTACAGGGTGTTAGCAGTCGTTTCCAACTG 1275
Query 252 TTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTA 305
|| |||| ||| |||| ||||| || | | ||||||||||| ||| ||||||
Sbjct 1276 TTGTTCCCCTC-CCAAGGTAGGTT-CTTATGGGTTACTCACCCATCCACCACTA 1327
>seq395746
Length=4806
Score = 136 bits (150), Expect = 8e-30
Identities = 122/153 (80%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
|||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| ||||||
Sbjct 3000 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 2941
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
||||||||||||||||||| |||||| | ||| || || || |||| ||| | ||
Sbjct 2940 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 2881
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159
|||||| || ||| || ||||||||||||||
Sbjct 2880 CTTGGTCAGCCTTTACCTGACCAACTACCTAAT 2848
>seq200207
Length=1248
Score = 116 bits (128), Expect = 7e-24
Identities = 102/127 (80%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 52 CTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCG 111
|||||||| |||| |||||||||||| ||||||| |||||| | ||| |||||| | ||
Sbjct 169 CTCCCGTAAGAGTTTGGGCCGTGTCTTAGTCCCAGTGTGGCTGATCATCCTCTCGGACCA 110
Query 112 GCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCC 171
|||| ||| ||| ||||| |||||| ||||||||||| |||||| | ||||||||
Sbjct 109 GCTATTAATCATCGCTTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCC 50
Query 172 CATCTTT 178
| || ||
Sbjct 49 CCTCCTT 43
>seq385033
Length=304
Score = 114 bits (126), Expect = 3e-23
Identities = 86/101 (85%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 60 GGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGA 119
||||| ||||||||||||||||||||||||||| | ||| |||||||| || |||| ||
Sbjct 1 GGAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCGGATCATCCTCTCAGACCCGCTATGGA 60
Query 120 TCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160
|||||| |||||| ||| ||| | ||||||||| ||||||
Sbjct 61 TCGTCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAATC 101
>seq296370
Length=251
Score = 111 bits (122), Expect = 3e-22
Identities = 172/243 (71%), Gaps = 11/243 (5%)
Strand=Plus/Plus
Query 63 GTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCG 122
||||||||||||||||||||||| |||||| | ||| |||||||| || ||||| |||||
Sbjct 1 GTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACGGATCG 60
Query 123 TCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC 182
||| |||||| ||| ||| | |||||||| |||||| | || |||| |||
Sbjct 61 TCGCCTTGGTAGGCCTTTACCCTACCAACTAGCTAATCCGATCTAGGCTCATCCAATAGC 120
Query 183 GATA-AATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCG 241
| || ||| |||| | | || | | | | ||||||||||||||| |
Sbjct 121 GGTACAAT--------AAAGCACCTTTCCCCCGTAGGGC-GTATGCGGTATTAGCGCGAG 171
Query 242 TTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCC 301
||||| |||| | || |||| ||||| || || | |||||||||||||||||
Sbjct 172 TTTCCCCGCGTTGTCCCCCTCTATTGGGCAGATTCCT-AGACTTTACTCACCCGTCCGCC 230
Query 302 ACT 304
||
Sbjct 231 GCT 233
>seq81729
Length=877
Score = 104 bits (114), Expect = 5e-20
Identities = 182/265 (69%), Gaps = 24/265 (9%)
Strand=Plus/Plus
Query 41 CCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAAC 100
|||| ||||||||||| |||||||||||||| ||||| ||||||||| | | |
Sbjct 389 CCCATTGCTGCCTCCCATAGGAGTCTGGGCCATGTCT------CAATGTGGCTAATTATC 442
Query 101 CTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160
|| || | || ||||| |||| || |||||| || ||| ||||||||||| |||||
Sbjct 443 CTTTCGGACCAGCTACTGATCATCACCTTGGTAAGCCATTGCCTCACCAACTAGCTAATT 502
Query 161 GGCCGCGAGCCCATCTTTCAGC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGA 219
|| ||||| || || || ||| || || || |||| |
Sbjct 503 AAACGTAAGCCCTTCCTTGGGCGGATCCCTCCTTTTTC--------------TCCTTAGC 548
Query 220 CATTATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTC 279
| |||| |||||||||| || |||||| ||| |||| ||| || || ||||| ||
Sbjct 549 C--TATGGGGTATTAGCGATCATTTCCAGTTGTTGTTCCCCTCCCAAGGGTAGGTT-CTT 605
Query 280 ACGTGTTACTCACCCGTCCGCCACT 304
||| |||||| ||||| ||||||
Sbjct 606 ACGCATTACTCTCCCGTTTGCCACT 630
>seq237345
Length=1774
Score = 102 bits (112), Expect = 2e-19
Identities = 74/86 (86%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
||| | ||||| |||| |||||||| || || |||||||||| ||||||||||||||||
Sbjct 1304 GCTCCGTCAGGCTTTCGCCCATTGTAGAAAATTCCCCACTGCTACCTCCCGTAGGAGTCT 1363
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGC 92
|||| ||||||||||||| ||||||
Sbjct 1364 AGGCCATGTCTCAGTCCCAGTGTGGC 1389
>seq206237
Length=4779
Score = 86.0 bits (94), Expect = 1e-14
Identities = 67/80 (84%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 20 TTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCA 79
||| |||||| | || || | ||||||||||||||| ||||||||| |||| |||||||
Sbjct 3322 TTCGCCCATTACGGAAAATTCTCCACTGCTGCCTCCCATAGGAGTCTAGGCCATGTCTCA 3381
Query 80 GTCCCAATGTGGCCGTTCAA 99
|||||| |||||| | ||||
Sbjct 3382 GTCCCAGTGTGGCTGATCAA 3401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 994446086400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |