Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq276135 129 5e-28 seq395726 127 2e-27 seq395746 118 9e-25 seq237345 98.7 8e-19 seq192414 87.8 1e-15 >seq276135 Length=207 Score = 129 bits (142), Expect = 5e-28 Identities = 125/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| | ||||||| ||| ||| |||| | |||| ||| || || | Sbjct 162 TCGAGTTGCAGAGTGCAATCCGAACTGAGATTAGCTTTAAGAGATTCGCTTGCCTTCACA 103 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 |||| || | | |||| ||||||||| ||||||| ||||| |||||||| || Sbjct 102 GGTTCGCTCCTCGTTGTACTAACCATTGTAGCACGTGTGTAGCCCAGGTCATAAGGGGCA 43 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||||||||| ||||||||||||||||||||||||| Sbjct 42 TGATGACTTGACGTCGTCCCCACCTTCCTCCGGTTTGTCAC 2 >seq395726 Length=26030 Score = 127 bits (140), Expect = 2e-27 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| |||||||||| ||| | ||| ||| ||||||| ||||||||| Sbjct 8376 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGG 8435 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 8436 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 8495 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 8496 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 8535 >seq395746 Length=4806 Score = 118 bits (130), Expect = 9e-25 Identities = 123/160 (77%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||||| |||||||| ||| | | ||||| || ||| |||| ||| | | Sbjct 4238 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCTGCCTTACAG 4180 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| |||| | |||||||| ||||||| |||| |||||||||||||| Sbjct 4179 CCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCAT 4120 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | |||||||||||||||||||||||||||| || | |||| Sbjct 4119 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTATATCAC 4080 >seq237345 Length=1774 Score = 98.7 bits (108), Expect = 8e-19 Identities = 120/160 (75%), Gaps = 3/160 (2%) Strand=Plus/Plus Query 3 GAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGGG 62 ||||||||| |||||||||| |||| | ||| ||| ||||||| |||||||||| Sbjct 402 GAGTTGCAGCCTACAATCCGAACTAAGGATGGGTTTTTGGAGTTAGCTCACCCTCGCGGG 461 Query 63 TTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACC-CATAAGGGCCAT 121 | | | |||| ||| ||||| || ||||||| | |||| |||||||| ||| Sbjct 462 ATCGTGACCCTTTGTCCTGGCCATT-TAGCACGTGTGTCGACCTAGTGCATAAGGGGCAT 520 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||| || |||||||||| || |||| Sbjct 521 GATGACTTGACGTCATATTCA-CTTCCTCCGGCTTATCAC 559 >seq192414 Length=2565 Score = 87.8 bits (96), Expect = 1e-15 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGA-TTAGCTCCCCCTCGCG 60 ||||||| || ||||||||| |||| | | |||| ||| ||||||| ||||| | Sbjct 699 CGAGTTGTAGCCTACAATCCAAACTAAGG-ATGGGTTCTTGGAGTTAGCTCACCCTCATG 757 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || | ||| |||| || ||||| || ||||||| ||| |||||||| || Sbjct 758 GGATTGCGACCCTTGGTCCCAGCCATTATAGCACGTGTGTCGCCTAGGGCATAAGGGGCA 817 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC 150 ||| ||||||||||||||| |||||||||| Sbjct 818 TGATGACTTGACGTCATCCTCACCTTCCTC 847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414404019250