Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09]
396,025 sequences; 631,307,653 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq231982 242 6e-62
seq194834 242 6e-62
seq213916 235 9e-60
seq395726 163 5e-38
seq395746 141 2e-31
seq164005 109 9e-22
seq322062 104 4e-20
seq237345 104 4e-20
seq89112 100 5e-19
seq29876 95.1 2e-17
seq246665 73.4 7e-11
>seq231982
Length=852
Score = 242 bits (268), Expect = 6e-62
Identities = 223/282 (79%), Gaps = 0/282 (0%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||||||||||||| |||||||||||| |||||||| | ||||||||||||| ||| |
Sbjct 157 CCCACGCTTTCGCATCTCAGCGTCAGTATCTGTCCAGAAGGCCGCCTTCGCCACCGGTAT 216
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||||| || |||||||||||||||||||||| ||||||| | ||||| || ||
Sbjct 217 TCCTCCACATCTCTACGCATTTCACCGCTACACGTGGAATTCTACCTTCCTCTACAATAC 276
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
|| || || |||||| || |||| | ||||||||||| | ||||||| || |||
Sbjct 277 TCTAGTTAACCAGTTTTAAGTGCAATTCCTAGGTTGAGCCCAGGGCTTTCACACCTAACT 336
Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240
| | ||||||||| ||||||||| |||| | | |||| ||||||| || ||| ||
Sbjct 337 TAATTATCCGCCTACATGCCCTTTACGCCCAGTCATTCCGATTAACGCTCGCACCCTCCG 396
Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
|||||||||||||||||||||| ||||||||| |||| |||
Sbjct 397 TATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCTTC 438
>seq194834
Length=372
Score = 242 bits (268), Expect = 6e-62
Identities = 223/282 (79%), Gaps = 0/282 (0%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||||||||||||| |||||| |||||| | |||||| | ||||||||||||||||||
Sbjct 36 CCCACGCTTTCGCACCTCAGTGTCAGTATCAGTCCAGTTAGTCGCCTTCGCCACTGGTGT 95
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||| | ||||||||||||||||||||||||||| | |||||| | ||||| | | ||
Sbjct 96 TCCTTCCTATATCTACGCATTTCACCGCTACACAGGAAATTCCACTAACCTCTACCGTAC 155
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
|| || | |||||| |||||| |||||||||| | ||||||||| |||
Sbjct 156 TCTAGTCAGTCAGTTTTGGATGCAGCTCCCAGGTTGAGCCCGGGGATTTCACATCCAACT 215
Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240
|| | || ||||| ||| |||||| |||| | | |||| |||||||||| ||| ||
Sbjct 216 TGACAAACCACCTACGCGCGCTTTACGCCCAGTTATTCCGATTAACGCTTGCACCCTTCG 275
Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
|||||||||||||||||||||| ||||||||| ||||||||
Sbjct 276 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGTGCTTATTC 317
>seq213916
Length=1123
Score = 235 bits (260), Expect = 9e-60
Identities = 227/286 (79%), Gaps = 8/286 (3%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||||||||||| || | |||||||||||| | || || | |||| ||| | || ||
Sbjct 503 CCCACGCTTTCGTGCTTGAGCGTCAGTTACGGCTTAGTAAGCTGCCTACGCAATCGGAGT 562
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
||||| |||||||| |||| ||||||||||||| |||||||| | | || | ||||
Sbjct 563 TCCTCGTTATATCTAAGCATGTCACCGCTACACAACGAATTCCGCCTACTTCATCCGCAC 622
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGG--GTTGAGC--CCATAGTTTTCACATCT 176
||||| || |||||||||| |||| || ||| ||| ||| ||| | |||||| ||
Sbjct 623 TCAAGGAACACAGTTTCAATGGCAG-CT-TGGAAGTTAAGCTTCCACA--TTTCACCACT 678
Query 177 GACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACC 236
||||| |||||||| | | ||||||| ||||||||||||||||||||||| || ||
Sbjct 679 GACTTAAGCTCCCGCCTGCGCACCCTTTAAACCCAATAAATCCGGATAACGCTCGCATCC 738
Query 237 TACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
| |||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 739 TCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGATGCTTATTC 784
>seq395726
Length=26030
Score = 163 bits (180), Expect = 5e-38
Identities = 207/285 (73%), Gaps = 0/285 (0%)
Strand=Plus/Plus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || |||||| |||||||| |
Sbjct 8929 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 8988
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || |||||||||||||||||| ||| | |||||| |||| || | | |||| ||
Sbjct 8989 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 9048
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | ||||||||||| | ||| || | |||||
Sbjct 9049 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 9108
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||| | |||||||||||||||| ||| ||||||
Sbjct 9109 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTA 9168
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||| ||||||||| ||||||||| ||| ||
Sbjct 9169 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 9213
>seq395746
Length=4806
Score = 141 bits (156), Expect = 2e-31
Identities = 204/286 (71%), Gaps = 4/286 (1%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||| |||||||| | ||||||| || |||| | | |||||||| ||| ||
Sbjct 3357 CCCATGCTTTCGCACTCCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCTTTTGGCGT 3298
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||| |||| |||| || |||||||| ||||||||| |||||| | ||||| |||
Sbjct 3297 TCCTTCGTAGATCTCCGGATTTCACCCCTACACACGAAATTCCACTCTCCTCTGTCTCAC 3238
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGA-GCCCATAGTTTTCACATCTGAC 179
||||| || ||||| | ||| | | ||| | | | |||||| | ||
Sbjct 3237 TCAAGTGAATTGGTTTCGAGAGCATTCCACCAGTTTTTGGCGAC---TTTCACTTTCAAC 3181
Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239
| | |||||||| ||||||||| |||| | | |||| | ||| |||||| || |
Sbjct 3180 CCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCC 3121
Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285
|| |||||||||||||||||||| ||||||||| ||||| ||||||
Sbjct 3120 GTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTC 3075
>seq164005
Length=1644
Score = 109 bits (120), Expect = 9e-22
Identities = 189/275 (69%), Gaps = 0/275 (0%)
Strand=Plus/Plus
Query 16 CTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTA 75
||||| || ||| | | ||||||| || |||||| |||||||| | | || ||||
Sbjct 704 CTCAGTGTTAGTATCGGCCCAGCAAAGTGCTTTCGCCGTTGGTGTTCTTTCTGATCTCTA 763
Query 76 CGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTT 135
|||||||||| ||| ||| |||||| |||| || | | |||| || ||||
Sbjct 764 CGCATTTCACTGCTCCACCAAAAATTCCCTCTGCCCCTACCGTACTCCAGCTTGGTAGTT 823
Query 136 TCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTAC 195
|| | | | ||||||||||| | ||| ||| | |||| || ||||
Sbjct 824 TCCACCTCTTGTCCAGGGTTGAGCCCTAATATTTGACAGCGTACTTAAAAAGCCATCTAC 883
Query 196 ACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGC 255
| |||||| |||||| | | |||||||||||| | ||| |||||| ||||| |
Sbjct 884 AAATGCTTTACGCCCAATCATTTCGGATAACGCTTACATCCTCTATATTACTACGGCTAC 943
Query 256 TGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||| ||||||||| ||||||||| ||| ||
Sbjct 944 TGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 978
>seq322062
Length=3318
Score = 104 bits (114), Expect = 4e-20
Identities = 196/286 (69%), Gaps = 2/286 (1%)
Strand=Plus/Plus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTC-CT 64
||||||| ||||| |||||| | | | || | || ||| || |||||||| ||
Sbjct 1850 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCTAGTAGAGTGCTTTCACCGTTGGTGTTCTCT 1909
Query 65 CCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAA 124
|| || ||||||||||||| |||| || |||||| |||| | | | |||| |
Sbjct 1910 CCA-ATCTCTACGCATTTCATCGCTCCATTGAAAATTCCCTCTGCCCTTACCGTACTCCA 1968
Query 125 GAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCC 184
| ||||||| | ||| | | ||||||||||| | ||| | |||||
Sbjct 1969 GCTTGGCAGTTTCCACCGCATGTTGAGGGTTGAGCCCTAGGATTTGATGGTGGACTTAAA 2028
Query 185 TTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244
|| | || | | ||||| |||||| | |||||||||||||| ||| |||||
Sbjct 2029 AAGCCACTTATAGACGCTTTATGCCCAATCGTTTCGGATAACGCTTGCATCCTTTGTATT 2088
Query 245 ACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
||||| |||||||||| ||||||||| |||||||||| || ||
Sbjct 2089 ACCGCAGCTGCTGGCATAGAGTTAGCCGGTGCTTATTCCTTAGATA 2134
>seq237345
Length=1774
Score = 104 bits (114), Expect = 4e-20
Identities = 191/276 (69%), Gaps = 3/276 (1%)
Strand=Plus/Plus
Query 16 CTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTA 75
||||| |||||| | |||||| || |||||| ||||||| | || ||||
Sbjct 963 CTCAGTGTCAGTGTTGGCCCAGCAGAGTGCTTTCGCCGTAGGTGTTCTTTTCGATCTCTA 1022
Query 76 CGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTT 135
||||||||||||| ||| | |||||| |||| | | | |||| || ||||
Sbjct 1023 TGCATTTCACCGCTGCACCAGAAATTCCCTCTGCCCTTACCGTACTCCAGCTTGGTAGTT 1082
Query 136 TCAAATGCAGG-CTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTA 194
|| | || | ||| |||||||||| | ||| || | ||||| || ||||
Sbjct 1083 TCCACCGCCTGTCTA-GGGTTGAGCCTTGGGATTTGACGGCAGACTTAAAAAGCCACCTA 1141
Query 195 CACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTG 254
|| |||||| |||||| | |||| ||||||||||| ||| ||||||||| || ||
Sbjct 1142 CAGATGCTTTACGCCCAATCATTCCGAATAACGCTTGCATCCTCTGTATTACCGTGGTTG 1201
Query 255 CTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
| ||||| |||||||| ||||||||| ||| ||
Sbjct 1202 C-GGCACAGAGTTAGCCAATGCTTATTCCCCAGATA 1236
>seq89112
Length=1507
Score = 100 bits (110), Expect = 5e-19
Identities = 84/103 (82%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|| |||||| | |||||| ||||| | |||||||||||||||| ||| ||||||||
Sbjct 1494 CCACCTACAGACGCTTTACGTCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTACC 1435
Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
||||||||||||| ||||||||| ||||||||| ||| ||
Sbjct 1434 ACGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 1392
>seq29876
Length=4505
Score = 95.1 bits (104), Expect = 2e-17
Identities = 75/90 (83%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 201 CTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCA 260
|||||| |||||| | |||| ||||||||||| ||| |||||||||||||||||||||
Sbjct 4504 CTTTACGCCCAATCATTCCGAATAACGCTTGCATCCTCTGTATTACCGCGGCTGCTGGCA 4445
Query 261 CGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
| ||||| ||| ||||||||| ||| ||
Sbjct 4444 CAGAGTTAACCGATGCTTATTCCCCAGATA 4415
>seq246665
Length=1204
Score = 73.4 bits (80), Expect = 7e-11
Identities = 78/103 (76%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|| |||||| |||||| || ||| | || |||||||||||| || ||||||||
Sbjct 137 CCACCTACAGATGCTTTACGCCTAATCATTCTAGATAACGCTTGCATTCTTTGTATTACC 78
Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|| |||||||||| |||||| || ||||||||| ||| ||
Sbjct 77 GCAGCTGCTGGCATAGAGTTAGTCGATGCTTATTCCCCAGATA 35
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 825620315275
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