Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq231982 242 6e-62 seq194834 242 6e-62 seq213916 235 9e-60 seq395726 163 5e-38 seq395746 141 2e-31 seq164005 109 9e-22 seq322062 104 4e-20 seq237345 104 4e-20 seq89112 100 5e-19 seq29876 95.1 2e-17 seq246665 73.4 7e-11 >seq231982 Length=852 Score = 242 bits (268), Expect = 6e-62 Identities = 223/282 (79%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| |||||||||||| |||||||| | ||||||||||||| ||| | Sbjct 157 CCCACGCTTTCGCATCTCAGCGTCAGTATCTGTCCAGAAGGCCGCCTTCGCCACCGGTAT 216 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| || |||||||||||||||||||||| ||||||| | ||||| || || Sbjct 217 TCCTCCACATCTCTACGCATTTCACCGCTACACGTGGAATTCTACCTTCCTCTACAATAC 276 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || || |||||| || |||| | ||||||||||| | ||||||| || ||| Sbjct 277 TCTAGTTAACCAGTTTTAAGTGCAATTCCTAGGTTGAGCCCAGGGCTTTCACACCTAACT 336 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | ||||||||| ||||||||| |||| | | |||| ||||||| || ||| || Sbjct 337 TAATTATCCGCCTACATGCCCTTTACGCCCAGTCATTCCGATTAACGCTCGCACCCTCCG 396 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||||| ||||||||| |||| ||| Sbjct 397 TATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCTTC 438 >seq194834 Length=372 Score = 242 bits (268), Expect = 6e-62 Identities = 223/282 (79%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| |||||| |||||| | |||||| | |||||||||||||||||| Sbjct 36 CCCACGCTTTCGCACCTCAGTGTCAGTATCAGTCCAGTTAGTCGCCTTCGCCACTGGTGT 95 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| | ||||||||||||||||||||||||||| | |||||| | ||||| | | || Sbjct 96 TCCTTCCTATATCTACGCATTTCACCGCTACACAGGAAATTCCACTAACCTCTACCGTAC 155 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || | |||||| |||||| |||||||||| | ||||||||| ||| Sbjct 156 TCTAGTCAGTCAGTTTTGGATGCAGCTCCCAGGTTGAGCCCGGGGATTTCACATCCAACT 215 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 || | || ||||| ||| |||||| |||| | | |||| |||||||||| ||| || Sbjct 216 TGACAAACCACCTACGCGCGCTTTACGCCCAGTTATTCCGATTAACGCTTGCACCCTTCG 275 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||||| ||||||||| |||||||| Sbjct 276 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGTGCTTATTC 317 >seq213916 Length=1123 Score = 235 bits (260), Expect = 9e-60 Identities = 227/286 (79%), Gaps = 8/286 (3%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| || | |||||||||||| | || || | |||| ||| | || || Sbjct 503 CCCACGCTTTCGTGCTTGAGCGTCAGTTACGGCTTAGTAAGCTGCCTACGCAATCGGAGT 562 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 ||||| |||||||| |||| ||||||||||||| |||||||| | | || | |||| Sbjct 563 TCCTCGTTATATCTAAGCATGTCACCGCTACACAACGAATTCCGCCTACTTCATCCGCAC 622 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGG--GTTGAGC--CCATAGTTTTCACATCT 176 ||||| || |||||||||| |||| || ||| ||| ||| ||| | |||||| || Sbjct 623 TCAAGGAACACAGTTTCAATGGCAG-CT-TGGAAGTTAAGCTTCCACA--TTTCACCACT 678 Query 177 GACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACC 236 ||||| |||||||| | | ||||||| ||||||||||||||||||||||| || || Sbjct 679 GACTTAAGCTCCCGCCTGCGCACCCTTTAAACCCAATAAATCCGGATAACGCTCGCATCC 738 Query 237 TACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 | |||||||||||||||||||||||| ||||||||| |||||||| Sbjct 739 TCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGATGCTTATTC 784 >seq395726 Length=26030 Score = 163 bits (180), Expect = 5e-38 Identities = 207/285 (73%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 8929 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 8988 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 8989 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 9048 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | ||||| Sbjct 9049 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 9108 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| |||||| Sbjct 9109 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTA 9168 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||| ||||||||| ||||||||| ||| || Sbjct 9169 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 9213 >seq395746 Length=4806 Score = 141 bits (156), Expect = 2e-31 Identities = 204/286 (71%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||| |||||||| | ||||||| || |||| | | |||||||| ||| || Sbjct 3357 CCCATGCTTTCGCACTCCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCTTTTGGCGT 3298 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| |||| |||| || |||||||| ||||||||| |||||| | ||||| ||| Sbjct 3297 TCCTTCGTAGATCTCCGGATTTCACCCCTACACACGAAATTCCACTCTCCTCTGTCTCAC 3238 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGA-GCCCATAGTTTTCACATCTGAC 179 ||||| || ||||| | ||| | | ||| | | | |||||| | || Sbjct 3237 TCAAGTGAATTGGTTTCGAGAGCATTCCACCAGTTTTTGGCGAC---TTTCACTTTCAAC 3181 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 | | |||||||| ||||||||| |||| | | |||| | ||| |||||| || | Sbjct 3180 CCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCC 3121 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285 || |||||||||||||||||||| ||||||||| ||||| |||||| Sbjct 3120 GTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTC 3075 >seq164005 Length=1644 Score = 109 bits (120), Expect = 9e-22 Identities = 189/275 (69%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 16 CTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTA 75 ||||| || ||| | | ||||||| || |||||| |||||||| | | || |||| Sbjct 704 CTCAGTGTTAGTATCGGCCCAGCAAAGTGCTTTCGCCGTTGGTGTTCTTTCTGATCTCTA 763 Query 76 CGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTT 135 |||||||||| ||| ||| |||||| |||| || | | |||| || |||| Sbjct 764 CGCATTTCACTGCTCCACCAAAAATTCCCTCTGCCCCTACCGTACTCCAGCTTGGTAGTT 823 Query 136 TCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTAC 195 || | | | ||||||||||| | ||| ||| | |||| || |||| Sbjct 824 TCCACCTCTTGTCCAGGGTTGAGCCCTAATATTTGACAGCGTACTTAAAAAGCCATCTAC 883 Query 196 ACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGC 255 | |||||| |||||| | | |||||||||||| | ||| |||||| ||||| | Sbjct 884 AAATGCTTTACGCCCAATCATTTCGGATAACGCTTACATCCTCTATATTACTACGGCTAC 943 Query 256 TGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||| ||||||||| ||||||||| ||| || Sbjct 944 TGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 978 >seq322062 Length=3318 Score = 104 bits (114), Expect = 4e-20 Identities = 196/286 (69%), Gaps = 2/286 (1%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTC-CT 64 ||||||| ||||| |||||| | | | || | || ||| || |||||||| || Sbjct 1850 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCTAGTAGAGTGCTTTCACCGTTGGTGTTCTCT 1909 Query 65 CCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAA 124 || || ||||||||||||| |||| || |||||| |||| | | | |||| | Sbjct 1910 CCA-ATCTCTACGCATTTCATCGCTCCATTGAAAATTCCCTCTGCCCTTACCGTACTCCA 1968 Query 125 GAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCC 184 | ||||||| | ||| | | ||||||||||| | ||| | ||||| Sbjct 1969 GCTTGGCAGTTTCCACCGCATGTTGAGGGTTGAGCCCTAGGATTTGATGGTGGACTTAAA 2028 Query 185 TTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244 || | || | | ||||| |||||| | |||||||||||||| ||| ||||| Sbjct 2029 AAGCCACTTATAGACGCTTTATGCCCAATCGTTTCGGATAACGCTTGCATCCTTTGTATT 2088 Query 245 ACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||| |||||||||| ||||||||| |||||||||| || || Sbjct 2089 ACCGCAGCTGCTGGCATAGAGTTAGCCGGTGCTTATTCCTTAGATA 2134 >seq237345 Length=1774 Score = 104 bits (114), Expect = 4e-20 Identities = 191/276 (69%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 16 CTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTA 75 ||||| |||||| | |||||| || |||||| ||||||| | || |||| Sbjct 963 CTCAGTGTCAGTGTTGGCCCAGCAGAGTGCTTTCGCCGTAGGTGTTCTTTTCGATCTCTA 1022 Query 76 CGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTT 135 ||||||||||||| ||| | |||||| |||| | | | |||| || |||| Sbjct 1023 TGCATTTCACCGCTGCACCAGAAATTCCCTCTGCCCTTACCGTACTCCAGCTTGGTAGTT 1082 Query 136 TCAAATGCAGG-CTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTA 194 || | || | ||| |||||||||| | ||| || | ||||| || |||| Sbjct 1083 TCCACCGCCTGTCTA-GGGTTGAGCCTTGGGATTTGACGGCAGACTTAAAAAGCCACCTA 1141 Query 195 CACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTG 254 || |||||| |||||| | |||| ||||||||||| ||| ||||||||| || || Sbjct 1142 CAGATGCTTTACGCCCAATCATTCCGAATAACGCTTGCATCCTCTGTATTACCGTGGTTG 1201 Query 255 CTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 | ||||| |||||||| ||||||||| ||| || Sbjct 1202 C-GGCACAGAGTTAGCCAATGCTTATTCCCCAGATA 1236 >seq89112 Length=1507 Score = 100 bits (110), Expect = 5e-19 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || |||||| | |||||| ||||| | |||||||||||||||| ||| |||||||| Sbjct 1494 CCACCTACAGACGCTTTACGTCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTACC 1435 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||||||| ||||||||| ||||||||| ||| || Sbjct 1434 ACGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 1392 >seq29876 Length=4505 Score = 95.1 bits (104), Expect = 2e-17 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 201 CTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCA 260 |||||| |||||| | |||| ||||||||||| ||| ||||||||||||||||||||| Sbjct 4504 CTTTACGCCCAATCATTCCGAATAACGCTTGCATCCTCTGTATTACCGCGGCTGCTGGCA 4445 Query 261 CGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 | ||||| ||| ||||||||| ||| || Sbjct 4444 CAGAGTTAACCGATGCTTATTCCCCAGATA 4415 >seq246665 Length=1204 Score = 73.4 bits (80), Expect = 7e-11 Identities = 78/103 (76%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || |||||| |||||| || ||| | || |||||||||||| || |||||||| Sbjct 137 CCACCTACAGATGCTTTACGCCTAATCATTCTAGATAACGCTTGCATTCTTTGTATTACC 78 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 || |||||||||| |||||| || ||||||||| ||| || Sbjct 77 GCAGCTGCTGGCATAGAGTTAGTCGATGCTTATTCCCCAGATA 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825620315275