Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq237196 143 2e-32 seq312436 95.1 8e-18 seq395726 82.4 5e-14 >seq237196 Length=353 Score = 143 bits (158), Expect = 2e-32 Identities = 114/137 (83%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| Sbjct 2 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTAAGACCTA 61 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| | |||||| | |||| ||||||| |||||| | |||||||| || ||| | Sbjct 62 CTTTCGTACCTGCTCGACTTGTCTGTCTCGCAGTCAAGCGCGCTTTTGCCTTTATACTCT 121 Query 121 CACTACGATTTCCGACC 137 | ||||||||||| Sbjct 122 TAGCGTGATTTCCGACC 138 >seq312436 Length=986 Score = 95.1 bits (104), Expect = 8e-18 Identities = 93/119 (78%), Gaps = 1/119 (1%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTC-ATAGCCACCGGATCACTATGACCT 59 |||||||||||| ||||||||||||| |||||||| | |||||||||||||||| || Sbjct 487 TACCTTTTATCCTTTGAGCGATGGCCATTCCATTCTGAAACCACCGGATCACTATGCTCT 546 Query 60 GCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||| | ||| || | |||| |||| || |||||| ||| ||||||| |||| Sbjct 547 AGTTTCCTACCTGATCGACTTGTGAGTCTCTCAGTCAAGCGTGCTTATGCCATTACACT 605 >seq395726 Length=26030 Score = 82.4 bits (90), Expect = 5e-14 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||| |||||||||| | || |||||||||| | || Sbjct 3284 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACCCGGCACCGTCGGATCACTAAGGCCGA 3343 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||| Sbjct 3344 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 3401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 350693117500