Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09]
396,025 sequences; 631,307,653 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq396017 127 2e-27
seq139656 122 9e-26
seq196146 118 1e-24
seq204053 109 6e-22
seq367070 91.5 2e-16
seq44610 89.7 5e-16
>seq396017
Length=8487
Score = 127 bits (140), Expect = 2e-27
Identities = 139/181 (77%), Gaps = 3/181 (2%)
Strand=Plus/Plus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| |||
Sbjct 2436 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCAT 2495
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | || | ||||| ||| || | ||| || |||||||
Sbjct 2496 GGGATAACATCATAGGATTT-CGATCCTATTCTGTTGGCCTTCGGGATCGGA-GTAATGA 2553
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||
Sbjct 2554 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 2613
Query 190 T 190
|
Sbjct 2614 T 2614
>seq139656
Length=992
Score = 122 bits (134), Expect = 9e-26
Identities = 136/178 (76%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| |||| ||||| | |||||||| |||||
Sbjct 373 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTATGCTCTGTATACATTAGCATGGG 314
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | | | ||||||||| || | | ||| | |||||||| |
Sbjct 313 ATAACATCATAGGATTT-CAATCCTATTTTGTTGGCCTTTGGGATCAGA-GTAATGATTA 256
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| ||||| ||| | || || || |||||||||||||||||| |||||||
Sbjct 255 ACAGGGACAGTCGAGGGCATTCGTTTTTCATAGTCAAAGGTGAAATTCTTAGATTTAT 198
>seq196146
Length=1550
Score = 118 bits (130), Expect = 1e-24
Identities = 137/181 (76%), Gaps = 3/181 (2%)
Strand=Plus/Minus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| ||| | |||||||| |||
Sbjct 856 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTTTGTATACATTAGCAT 797
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | || | ||||| ||| || | ||| |||||||
Sbjct 796 GGGATAACATCATAGGATTT-CGATCCTATTCTGTTGGCCTTCGGGATTAGA-GTAATGA 739
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| |||| ||||||||||||| | ||||| || |||| |||| |||||||||||||||
Sbjct 738 TTAATAGGGATAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTTAAATTCTTGGATTTA 679
Query 190 T 190
|
Sbjct 678 T 678
>seq204053
Length=2206
Score = 109 bits (120), Expect = 6e-22
Identities = 135/181 (75%), Gaps = 3/181 (2%)
Strand=Plus/Plus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||||| |||| || | |||||||| |||
Sbjct 820 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACACTTTGTATACATTAGCAT 879
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| |||| | |||||| | | | ||||||||| || | |||| | ||||||
Sbjct 880 GGGATAACATGATAGGATTTT-GATCCTATTTTGTTGGCCTTCAGGATTGGA-GTAATGT 937
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| ||| |||||||| |||| | ||||| || || | ||||||||||||||||||||
Sbjct 938 TTAATTAGGATAGTCAGGGGCATTCGTATTTCATAGTTAGAGGTGAAATTCTTGGATTTA 997
Query 190 T 190
|
Sbjct 998 T 998
>seq367070
Length=7107
Score = 91.5 bits (100), Expect = 2e-16
Identities = 131/181 (72%), Gaps = 3/181 (2%)
Strand=Plus/Minus
Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC-TCGAATACATTACCAT 69
|| |||||||||| ||||||||| | |||||| | |||| | | | |||||||| |||
Sbjct 2356 CTATTACTTTGAAGAAATTAGAGTGCTCAAAGTAAGCCTACACATTGTATACATTAGCAT 2297
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|| ||| || |||||| | | | ||||| | | || | |||| | |||| |
Sbjct 2296 GGGATATTATTATAGGATTTT-GATCCTATTCTATTGGCCTTCAGGATCAAAA-TAATTA 2239
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| || | ||||||||| ||| | |||| || |||||||||||||||||| ||||||
Sbjct 2238 TTAACAAGGATAGTCGAGGGCATTCATATTTCATAGTCAAAGGTGAAATTCTTAGATTTA 2179
Query 190 T 190
|
Sbjct 2178 T 2178
>seq44610
Length=2545
Score = 89.7 bits (98), Expect = 5e-16
Identities = 129/178 (72%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA-ATACATTACCATGGA 72
|||||||||| ||||||||| | |||||| |||| |||| | ||||| || |||||
Sbjct 403 TTACTTTGAAGAAATTAGAGTGCCTAAAGCAAGCCTATGCTTTATATACACTAGCATGGG 344
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | | || |||| | | || | ||||| | |||||||| |
Sbjct 343 ATAACATCATAGGATTTT-GTTTTTATTCTATTGGCCTTTAGGATCAGA-GTAATGATTA 286
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| | | ||| | ||||| || |||| |||||||||||||||||||||
Sbjct 285 ACAGGGACGATTGAGGGCTTTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 510035716000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |