Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq396017 309 6e-82 seq268542 237 3e-60 seq90465 237 3e-60 seq383268 233 4e-59 seq196146 232 1e-58 seq370215 210 4e-52 seq353571 152 1e-34 seq146673 140 6e-31 seq204053 129 1e-27 seq361799 107 4e-21 seq32353 91.5 3e-16 seq213076 86.0 1e-14 seq11414 80.6 5e-13 >seq396017 Length=8487 Score = 309 bits (342), Expect = 6e-82 Identities = 229/264 (87%), Gaps = 4/264 (2%) Strand=Plus/Plus Query 67 GCCGGCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124 ||| |||||||||||||||||| | ||| | ||| | |||||||||||||||||||||| Sbjct 3067 GCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCAA-GGAAGTTTGAGGCAATAACAGG 3125 Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 3126 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGT 3185 Query 185 TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || ||||||||| ||| | |||||||||| | ||| | ||||| |||||||||| Sbjct 3186 CTATAGCCTTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGA 3244 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 |||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||| Sbjct 3245 TCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCG 3304 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||| ||||||||||||||||||| Sbjct 3305 TTGACTACGTCCCTGCCCTTTGTA 3328 >seq268542 Length=539 Score = 237 bits (262), Expect = 3e-60 Identities = 214/264 (81%), Gaps = 5/264 (2%) Strand=Plus/Minus Query 68 CCGGCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125 || |||||||||||||| ||| | ||| | ||| | ||||||||||||||||||| || Sbjct 388 CCAGCTTCTTAGAGGGATTATGGCTGCTTAGGCCAA-GGAAGTTTGAGGCAATAACTAGT 330 Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185 |||||||||||||||||||| |||||| |||| |||||||| ||| | |||||||| Sbjct 329 CTGTGATGCCCTTAGATGTTTTGGGCCACACGTGCGCTACATTGATGTATTCAACGAGTC 270 Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGA-TAGA 244 || ||||||||| ||| | |||||||||| | ||| | ||||| |||||| |||| Sbjct 269 TATAGCCTTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATTAGA 211 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 ||||||| || ||| ||||||||||| ||| ||||| |||| || ||||||||| | | Sbjct 210 TCATTGCATTTGTTGGTCTTCAACGAGTAATTCCTAGCAAGCACGAGTCATCAGCTCAGG 151 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||| ||||||||||||| ||||| Sbjct 150 TTGACTACGTCCCTGCCCCTTGTA 127 >seq90465 Length=2101 Score = 237 bits (262), Expect = 3e-60 Identities = 189/226 (84%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162 ||||||||||||||||||||||||||||||| ||||||||||| |||||| || |||||| Sbjct 13 GGAAGTTTGAGGCAATAACAGGTCTGTGATGTCCTTAGATGTTTTGGGCCACAAGCGCGC 72 Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222 |||||||| | |||||||| || ||||||||| ||| | | |||||||| | || Sbjct 73 TACACTGATGTATTCAACGAGTCTATAGCCTTGGCCGACAGGCCCGAGTAATCTT-TGAA 131 Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282 | | ||||| |||||||||| ||||| |||| ||| ||||||||||| ||| |||| Sbjct 132 ATTTCATCGTGATGGGGATAGATCATTGTAATTGTTGGTCTTCAACGAGAAATTTTTAGT 191 Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||| ||||||||| |||||||| ||||||| ||||||||||| Sbjct 192 AAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCTTGCCCTTTGTA 237 >seq383268 Length=8310 Score = 233 bits (258), Expect = 4e-59 Identities = 214/267 (80%), Gaps = 4/267 (1%) Strand=Plus/Minus Query 64 GTCGCCGGCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAAC 121 || ||| |||||||||||| ||||| | ||| | ||| | |||||||| ||||||||| Sbjct 7286 GTGGCCAGCTTCTTAGAGGTACTATGGCCGCTTAGGCCAA-GGAAGTTTAAGGCAATAAT 7228 Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACG 181 |||||| |||||||||||||||||||||| ||||||| || ||||||| | ||||| Sbjct 7227 AGGTCTATGATGCCCTTAGATGTTCTGGGTTGCACGCGTGCAACACTGATGTATTCAACG 7168 Query 182 AGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGAT 241 ||| || ||||||||| ||| || ||||||||| | ||| | | ||| ||||||| Sbjct 7167 AGTCTATAGCCTTGGCCGATAGGCCTAGGTAATCTT-TAAAATTTCATTGTGATGGGGAT 7109 Query 242 AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCAC 301 ||| |||||||||| ||| || |||||||| ||| |||||||||| || ||||||| | | Sbjct 7108 AGATCATTGCAATTGTTGGTCCTCAACGAGAAATTCCTAGTAAGCACGAGTCATCATCTC 7049 Query 302 GCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||| ||| ||||| | |||||| Sbjct 7048 GCGTTGACTACATCCCTACTGTTTGTA 7022 >seq196146 Length=1550 Score = 232 bits (256), Expect = 1e-58 Identities = 188/224 (84%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 68 CCGGCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125 || |||||||||||||||| | | ||| | ||| | ||||||||| |||||||| |||| Sbjct 224 CCAGCTTCTTAGAGGGACTGTGGCCGCTTAGGCCAA-GGAAGTTTGTGGCAATAATAGGT 166 Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185 |||||||||||||||||||||||||||||||||| |||||||||| | |||||||| Sbjct 165 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGTGCTACACTGATGTATTCAACGAGTC 106 Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245 || ||||||||| ||| | |||||||||| | ||| | ||||| |||||||||| Sbjct 105 TATAGCCTTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGAT 47 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCG 289 |||||||||| ||| ||||||||||||||| ||||||||||||| Sbjct 46 CATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCG 3 >seq370215 Length=5228 Score = 210 bits (232), Expect = 4e-52 Identities = 204/259 (79%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 ||||||||||||||||| | ||| | ||| | |||||||||||||||||| |||||| | Sbjct 1 CTTCTTAGAGGGACTATGGCAGCTTAGGCCAA-GGAAGTTTGAGGCAATAATAGGTCTAT 59 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189 ||||||||||||||| || ||| |||| || ||||| ||| | |||||||| || Sbjct 60 GATGCCCTTAGATGTGCTAAGCCACACGTGCACTACATTGATGAATTCAACGAGTCTATA 119 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 |||| |||| ||| | ||||||||| | ||| | | ||||| |||||||||| ||| Sbjct 120 GCCTTCGCCGACAGGCCCAGGTAATCTT-TGAAATTTTATCGTGATGGGGATAGATGATT 178 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 |||||| ||| |||| ||| |||||| |||||||||| | | ||||||| | | ||| Sbjct 179 GCAATTGTTGGTCTTTAACAAGGAATTCCTAGTAAGCACAAGCCATCAGCTCATGATGAC 238 Query 310 TACGTCCCTGCCCTTTGTA 328 ||| ||| ||||||||||| Sbjct 239 TACATCCTTGCCCTTTGTA 257 >seq353571 Length=5323 Score = 152 bits (168), Expect = 1e-34 Identities = 166/215 (77%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| || Sbjct 1948 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCGGGGCCGCACGCGCGCTACATTGAGAG 2007 Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233 | || ||||| || | |||| || |||||||| | || | | || | Sbjct 2008 ACAAAATGAGTT-TTCTAGTCTTTAATAAGG-CT-AGTAATCTT-TGAATGTTTTTCTTA 2063 Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293 ||||||||| | ||||||||| | | ||| |||||||||| || |||||| || ||| Sbjct 2064 ATGGGGATAGGGGATTGCAATTGTGCCCCTTGAACGAGGAATTCCCAGTAAGTGCTAGTC 2123 Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||| | ||||||||||||||||||||||| Sbjct 2124 ATTAGCTAGTACTGATTACGTCCCTGCCCTTTGTA 2158 >seq146673 Length=857 Score = 140 bits (154), Expect = 6e-31 Identities = 145/188 (77%), Gaps = 13/188 (7%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCG------CTTTGGCGGGTCGCCGGCT 73 || |||||||| |||||||||| |||| | || | || ||| || || Sbjct 675 GAACGAGACCTCAACCTGCTAACTAGCTATGCGGAGGATACCCTTCACGG----CCAACT 730 Query 74 TCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||||||||| | ||| | ||| | ||||||||||||||||||||||||||||| Sbjct 731 TCTTAGAGGGACTATGGTCGCTTAGGCCAA-GGAAGTTTGAGGCAATAACAGGTCTGTGA 789 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 || ||||||||||| |||||| || |||||||||||||| | |||||||| || | Sbjct 790 TGTCCTTAGATGTTTTGGGCCACAAGCGCGCTACACTGATGTATTCAACGAGTCTATAGC 849 Query 192 CTTGGCCG 199 |||||||| Sbjct 850 CTTGGCCG 857 >seq204053 Length=2206 Score = 129 bits (142), Expect = 1e-27 Identities = 135/174 (78%), Gaps = 4/174 (2%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||||||||||||||||| | ||| ||| | ||||||||||||| |||||| ||||| Sbjct 1454 GCTTCTTAGAGGGACTATGGCTGCTTTGGCCAA-GGAAGTTTGAGGCTATAACAAGTCTG 1512 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 ||||||||||| |||||||||||| | ||||||||| ||| | | |||||||| || Sbjct 1513 TGATGCCCTTATATGTTCTGGGCCACTCGCGCGCTAAACTAATGTATTCAACGAGTCTAT 1572 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATA 242 ||||||||| | | | ||||||| || | ||| | | || |||||||| Sbjct 1573 AGCCTTGGCCGACAAGCCCGGGTAAT-TTTTGAAATTTCATTATGATGGGGATA 1625 >seq361799 Length=1054 Score = 107 bits (118), Expect = 4e-21 Identities = 65/69 (94%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| ||||||||||||| ||||||||| |||||||| |||||||||| Sbjct 622 CTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTG 681 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 682 CCCTTTGTA 690 >seq32353 Length=4027 Score = 91.5 bits (100), Expect = 3e-16 Identities = 102/135 (76%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 104 GAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCT 163 |||||||||| ||||||| |||||||||||||||||||||| ||||||||| | ||||| Sbjct 3523 GAAGTTTGAGATAATAACATGTCTGTGATGCCCTTAGATGTTTTGGGCCGCATGTGCGCT 3582 Query 164 ACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAA 223 ||| ||| | ||| |||| || ||||| | | | | |||||| ||| | ||| Sbjct 3583 ACATTGATGTATTCAATGAGTCTATAGCCTTGATGGACAAGCCCGGGTAACCTT-TGAAA 3641 Query 224 CTCTGTCGTGCTGGG 238 | ||||| |||| Sbjct 3642 TTTCATCGTGATGGG 3656 >seq213076 Length=890 Score = 86.0 bits (94), Expect = 1e-14 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 ||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||||||| ||| Sbjct 62 ATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTAC 3 Query 313 GT 314 || Sbjct 2 GT 1 >seq11414 Length=993 Score = 80.6 bits (88), Expect = 5e-13 Identities = 49/52 (94%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 277 CCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||||||||| ||||||||| |||||||| ||||||||||||||||||| Sbjct 1 CCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTA 52 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943448851200