Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09]
396,025 sequences; 631,307,653 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq304107 154 3e-35
seq295240 131 3e-28
seq338586 120 6e-25
seq327769 118 2e-24
seq395726 114 2e-23
seq323315 89.7 9e-16
seq232183 84.2 4e-14
seq395770 77.0 6e-12
seq251623 77.0 6e-12
seq243797 77.0 6e-12
seq140143 77.0 6e-12
>seq304107
Length=380
Score = 154 bits (170), Expect = 3e-35
Identities = 180/238 (76%), Gaps = 10/238 (4%)
Strand=Plus/Minus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|| |||||||| |||||||| ||| | | |||||||||||||||| || ||||| |
Sbjct 380 AGGGCACATGGGGGATGCCTAGGCTCTCAGAGGCGATGAAGGACGTGATAAGCTGCGAAA 321
Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120
||| | |||||| ||||||| | | ||||||||| ||| ||||||||||| ||||||||
Sbjct 320 AGCCGTGGGGAG-GAGCAAATATCCATTGATCCGCGGATATCCGAATGGGGCAACCCGGC 262
Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180
|| | || ||| ||| ||| | ||| ||||||| ||||||||||
Sbjct 261 ----AGG---AGAAGATCCTG-TCACA-CCGTAAGGTGAGCAAACGCGGGGAACTGAAAC 211
Query 181 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238
||||||||| | ||||||||| ||| ||| | |||||| ||||||||||||||||
Sbjct 210 ATCTAAGTACCCGCAGGAAAATAAAACAAAAGTGATTCCGTTAGTAGTGGCGAGCGAA 153
>seq295240
Length=389
Score = 131 bits (144), Expect = 3e-28
Identities = 160/217 (74%), Gaps = 6/217 (3%)
Strand=Plus/Plus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|||||| |||||||||||||||||| | |||||| ||||||||| ||| ||||| |
Sbjct 173 AGTGCATCAGGTGGATGCCTTGGCGATGATAGGCGAAGAAGGACGTGTAAGCCTGCGAAA 232
Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120
||| |||||| |||| || |||||| ||| ||||||||||||||||| |
Sbjct 233 AGCGTGGGGGAGCTGGCAATAGAGCTGTGATCCCGCGATATCCGAATGGGGAAACCCACC 292
Query 121 CCTTTGGGTCATTGCA-----TGCTGAATACATAGGTA-TGCAAAGCGAACGCGGCGAAC 174
| ||| | | | ||||||||||||||| | |||||||| || ||||
Sbjct 293 ATGTATAAGCATGGTATCCTGTACTGAATACATAGGTACAGAGAAGCGAACCTGGAGAAC 352
Query 175 TGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACC 211
|||| |||||||||| | |||||||||||||||||
Sbjct 353 TGAACCATCTAAGTACCCAGAGGAAAAGAAATCAACC 389
>seq338586
Length=342
Score = 120 bits (132), Expect = 6e-25
Identities = 88/101 (87%), Gaps = 1/101 (1%)
Strand=Plus/Plus
Query 139 CTGAATACATAGGTA-TGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGG 197
|||||| |||||||| || |||||||| || ||||||||||||||||||| | |||
Sbjct 8 CTGAATCCATAGGTACTGAGAAGCGAACCAGGGGAACTGAAACATCTAAGTACCCTGAGG 67
Query 198 AAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238
||||||||||||||||||| ||| |||||||||||||||||
Sbjct 68 AAAAGAAATCAACCGAGATACCCCAAGTAGTGGCGAGCGAA 108
>seq327769
Length=231
Score = 118 bits (130), Expect = 2e-24
Identities = 151/206 (73%), Gaps = 13/206 (6%)
Strand=Plus/Minus
Query 54 TGCGATAAGCTGCGGGGAGT-GAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGA 112
||||| |||| ||| |||| || ||| | || | | ||| ||| ||||||||||||
Sbjct 226 TGCGAAAAGCAACGGTGAGTCGATAAAAGGCGCTAT-ACCCGTTGATGTCCGAATGGGGA 168
Query 113 AACCCGGCCCTTTGGGTCATTGCA--------TGCTGAATACATAGGTATGCAAAGCGAA 164
||||| | | || | |||| || ||||||||||| | | |||||
Sbjct 167 AACCCAGTGCA---GGCGACTGCACTATCATCTGATGAATACATAGTCAGATGAGGCGAA 111
Query 165 CGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAG 224
| || ||||||||||||||||||| | |||||||||||||||||||||||||| ||
Sbjct 110 CCGGGAGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCTGAG 51
Query 225 TAGTGGCGAGCGAAATGGGATGAGCC 250
||| ||||||||||| |||| ||||
Sbjct 50 TAGCGGCGAGCGAAAGGGGAGCAGCC 25
>seq395726
Length=26030
Score = 114 bits (126), Expect = 2e-23
Identities = 174/243 (72%), Gaps = 11/243 (5%)
Strand=Plus/Minus
Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69
||||||| ||| ||| | || ||| ||||| |||| || ||| | ||| ||||
Sbjct 5719 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAATAAGCGACGAAATGCTTCGGG 5660
Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129
|||| | ||| | | ||||| ||||| |||||| || |||| ||| |
Sbjct 5659 GAGTT-GAAAATAAGCGGAAATCCGGAGATTCCCGAATAGGTCAACC------TTTCGAA 5607
Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188
| ||| |||||||| ||| || | |||| || ||| || |||||||||||||| |||
Sbjct 5606 C--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGTGAACTGAAACATCTTAGT 5550
Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248
||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| ||
Sbjct 5549 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 5490
Query 249 CCT 251
|||
Sbjct 5489 CCT 5487
>seq323315
Length=1392
Score = 89.7 bits (98), Expect = 9e-16
Identities = 90/116 (78%), Gaps = 1/116 (1%)
Strand=Plus/Minus
Query 137 TGCTGAATACATAGGTATGCAAA-GCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195
|| ||||| ||| || | ||||| | ||| | |||||||||||||| ||||||| |
Sbjct 536 TGTTGAATCCATGGGCAGGCAAAAGACAACCTTGTGAACTGAAACATCTTAGTAGCTAGA 477
Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251
|||||||||| ||| | |||| || ||||| |||||||||||| ||| |||||
Sbjct 476 GGAAAAGAAAGCAAAAGCGATTACCGTAGTAGCGGCGAGCGAAATAGGAGCAGCCT 421
>seq232183
Length=3833
Score = 84.2 bits (92), Expect = 4e-14
Identities = 89/116 (77%), Gaps = 1/116 (1%)
Strand=Plus/Plus
Query 137 TGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195
|||| ||| ||| || | |||| || ||| || ||||| |||||||| |||||| |
Sbjct 918 TGCTAAATCCATGGGCAGGCAAGAGACAACCTGGTGAACTAAAACATCTTAGTAGCCAGA 977
Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251
|||||||||| ||| | ||||||| |||| |||||||||||| ||| |||||
Sbjct 978 GGAAAAGAAAGCAAAAGTGATTCCCGTAGTAACGGCGAGCGAAATAGGAGCAGCCT 1033
>seq395770
Length=13961
Score = 77.0 bits (84), Expect = 6e-12
Identities = 63/77 (82%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228
|||||||||||||||| ||||||| ||||| |||||||||||||| || |||||
Sbjct 13203 GCGAACTGAAACATCTGAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGC 13262
Query 229 GGCGAGCGAAATGGGAT 245
||||||||| | ||||
Sbjct 13263 GGCGAGCGAGAGCGGAT 13279
>seq251623
Length=1614
Score = 77.0 bits (84), Expect = 6e-12
Identities = 80/104 (77%), Gaps = 1/104 (1%)
Strand=Plus/Plus
Query 137 TGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195
|||||||| ||| || | |||| || ||| || ||||||||||||| ||||||| |
Sbjct 189 TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGTGAACTGAAACATCCTAGTAGCTAGA 248
Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239
|||||||||| ||| | ||||||| |||| | ||||| |||
Sbjct 249 GGAAAAGAAAGCAAAAGCGATTCCCGTAGTAACGACGAGCAAAA 292
>seq243797
Length=1715
Score = 77.0 bits (84), Expect = 6e-12
Identities = 83/109 (76%), Gaps = 1/109 (1%)
Strand=Plus/Minus
Query 137 TGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195
|| ||||| ||| || | | || || ||| | |||||||||||||| || ||| |
Sbjct 1477 TGTTGAATCCATGGGCAGGTAAGAGACAACCTGATGAACTGAAACATCTTAGCAGCCAGA 1418
Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGA 244
|||||||||| ||| || ||||||| |||||| | |||| ||||||||
Sbjct 1417 GGAAAAGAAAGCAAACGTGATTCCCGAAGTAGCGATGAGCTAAATGGGA 1369
>seq140143
Length=4702
Score = 77.0 bits (84), Expect = 6e-12
Identities = 86/114 (75%), Gaps = 1/114 (1%)
Strand=Plus/Minus
Query 139 CTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGG 197
|||||| ||| || | |||| || ||| || ||||| | |||||| ||||| |||
Sbjct 3265 CTGAATCCATTGGCAAGCAAGAGACAACCTGGTGAACTAAGACATCTTAGTAGGCAGAGG 3206
Query 198 AAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251
|||||||| ||| | |||||| | ||||| | ||||||||||||| |||||
Sbjct 3205 AAAAGAAAGCAAAAGCGATTCCTATAGTAGCAGTGAGCGAAATGGGAGCAGCCT 3152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 914762906400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |