Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09]
396,025 sequences; 631,307,653 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq213916 324 3e-86
seq231982 147 5e-33
seq395726 127 4e-27
seq395746 116 8e-24
seq385033 104 5e-20
seq192414 96.9 7e-18
seq48036 93.3 9e-17
seq376176 89.7 1e-15
seq164005 86.0 1e-14
seq322062 84.2 5e-14
seq237345 75.2 2e-11
>seq213916
Length=1123
Score = 324 bits (358), Expect = 3e-86
Identities = 275/333 (83%), Gaps = 7/333 (2%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
||||||||||||||||||||||||||||||||| || |||| | ||| | | |||
Sbjct 752 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCTTACAGTACTTGCAA--TGCATTACGC 809
Query 61 GGAAGG--TTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCAC 118
| || | ||||| ||| |||||||||||||||||| || || | || ||||||||
Sbjct 810 GTAACGCATTTTACTCCTGTATAAAAGAAGTTTACAACCCATAAGGCAGTCTTCCTTCAC 869
Query 119 GCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGT 178
|| ||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||
Sbjct 870 GCGACTTGGCTGGTTCAGGCTATCGCCCATTGACCAATATTCCTCACTGCTGCCTCCCGT 929
Query 179 AGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCC 238
|||||| ||| |||||||||||||||| ||||||||| | |||||||| |||||||||
Sbjct 930 AGGAGTCTGGTCCGTGTCTCAGTTCCAGTGTGGGGGATCGACCTCTCAGTTCCCCTATCC 989
Query 239 ATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTA 298
||||| | || |||| ||||||||| | || |||| |||||||||||||| |||||| ||
Sbjct 990 ATCGTTGCCTTGGTGAGCCGTTACCTCACCAACTAGCTAATGGAACGCATGCCCATC-TA 1048
Query 299 C-ACCGATGAATCTTTAATGATGATACCATGCA 330
| ||||| | ||||||| | |||||||||
Sbjct 1049 CTACCGAAG-TTCTTTAACAAATTTACCATGCA 1080
>seq231982
Length=852
Score = 147 bits (162), Expect = 5e-33
Identities = 152/198 (77%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCT 141
|||| | ||||||| ||| || ||||| || | ||||| | |||||| |||| |
Sbjct 493 AAAGTACTTTACAACCCGAAGG-CCTTCTTCATACACGCGGCATGGCTGCATCAGGGTTC 551
Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201
| |||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 552 CCCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 611
Query 202 TCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTA 261
|||| ||||| | | |||||||||| | ||| ||||| | || ||| ||| |||
Sbjct 612 TCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGAGATCGTCGCCTTGGTAAGCCATTA 671
Query 262 CCCCGCCTACTACCTAAT 279
||| || |||| |||||
Sbjct 672 CCCTACCAACTAGCTAAT 689
>seq395726
Length=26030
Score = 127 bits (140), Expect = 4e-27
Identities = 195/279 (70%), Gaps = 18/279 (6%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| || ||| || |
Sbjct 9173 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATACCGTCAT-----------T 9221
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| || ||| | |||||||||| || | |||||| ||||| ||| |||||
Sbjct 9222 GC------TTCTTCTCCGGGAAAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACGC 9274
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 9275 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 9334
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 9335 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 9394
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 9395 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 9433
>seq395746
Length=4806
Score = 116 bits (128), Expect = 8e-24
Identities = 145/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164
||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| ||
Sbjct 3022 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 2963
Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224
|||||||| ||||| ||||| || |||||||||||| ||| ||||| || | |||
Sbjct 2962 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 2903
Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284
||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| ||
Sbjct 2902 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 2843
Query 285 GCATCCCCATCGTACACCG 303
||| | |||| ||| ||
Sbjct 2842 GCAGGCTCATCAAACAGCG 2824
>seq385033
Length=304
Score = 104 bits (114), Expect = 5e-20
Identities = 83/100 (83%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 180 GGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCA 239
||||||||| |||||||||||| ||||||||| ||| | |||||||||| || |||| |
Sbjct 1 GGAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCGGATCATCCTCTCAGACCCGCTATGGA 60
Query 240 TCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
|||| | || ||| |||| ||||||| || |||| |||||
Sbjct 61 TCGTCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAAT 100
>seq192414
Length=2565
Score = 96.9 bits (106), Expect = 7e-18
Identities = 142/199 (71%), Gaps = 3/199 (2%)
Strand=Plus/Plus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| || | || | | ||||| ||| ||||| | | ||| |||| ||
Sbjct 1544 AAAAGAAGTTCACCACCCATGG--CCTTCTACCTCCACGCAGCATTGCTCCGTCAGGCTT 1601
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
| |||||| || ||||| |||||||||||||| ||||||| ||| ||||||| ||
Sbjct 1602 TTACCCATTGCAAAAAATTCCCCACTGCTGCCTCCCATAGGAGTCTGG-GCGTGTCTTAG 1660
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
| | | ||||| || | |||||||||| | ||| ||| | | || ||| ||| ||
Sbjct 1661 TCCTAGTGTGGTTGATCATCCTCTCAGACCAGCTACTGATCATCGCCTTGGTAGGCTATT 1720
Query 261 ACCCCGCCTACTACCTAAT 279
|| | || |||| |||||
Sbjct 1721 GCCTCACCAACTAGCTAAT 1739
>seq48036
Length=1819
Score = 93.3 bits (102), Expect = 9e-17
Identities = 110/148 (74%), Gaps = 1/148 (1%)
Strand=Plus/Minus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| | | |||||| ||||| ||| | || | | ||| |||| ||
Sbjct 1496 AAAAGAAGTTCAAGACCCGTAGG-CCTTCTACCTCTATGCGGCATTGCTCCGTCAGGCTT 1438
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || ||| |||||||||||||||||||||||||| || ||||||||
Sbjct 1437 TCGCCCATTGCAGAAAATTTTCCACTGCTGCCTCCCGTAGGAGTTTGGGCCATGTCTCAG 1378
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGA 228
| | | ||||| || | |||||| |||
Sbjct 1377 TCCTAGTGTGGCTGATCATCCTCTTAGA 1350
>seq376176
Length=1945
Score = 89.7 bits (98), Expect = 1e-15
Identities = 112/151 (74%), Gaps = 2/151 (1%)
Strand=Plus/Plus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| | | || ||| ||||| ||| ||||| || | ||| ||| |
Sbjct 1757 AAAAGAAGTTCATGACCCATAGG-CCTTCTACCTCCACGCGACATTGCTCCATCAAGGTT 1815
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
|| |||||| || ||||| |||| ||||||||||||||||| || |||||||||||
Sbjct 1816 TCACCCATTGCAAAAAATTCCCCACTACTGCCTCCCGTAGGAGTCTGTGCCGTGTCTCAG 1875
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACC 231
| ||| ||||| | | ||||||| |||||
Sbjct 1876 TCCCAGTGTGGCTAATCATCCTCTC-GAACC 1905
>seq164005
Length=1644
Score = 86.0 bits (94), Expect = 1e-14
Identities = 139/199 (70%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| |||| || ||| ||||| ||| | || | | ||| |||| |
Sbjct 1001 AAAAGAAGTTCACAACCCATAGG-CCTTCTACCTCTAGGCAGCATTGCTCTGTCAGGCGT 1059
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || |||| ||||| ||||||||||| |||| ||| ||||||||
Sbjct 1060 TCGCCCATTGTAGAAAATTCTCCACTGTTGCCTCCCGTAAGAGTCTGGGATATGTCTCAG 1119
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
| | | ||||| || | |||||||||| | ||| ||| | | || ||| || ||
Sbjct 1120 TCCTAGTGTGGCTGATCATCCTCTCAGACCAGCTACTAATCATCGCCTTGGTAAGCTATT 1179
Query 261 ACCCCGCCTACTACCTAAT 279
|||| | |||| |||||
Sbjct 1180 GCCCCATCAACTAGCTAAT 1198
>seq322062
Length=3318
Score = 84.2 bits (92), Expect = 5e-14
Identities = 98/131 (75%), Gaps = 1/131 (1%)
Strand=Plus/Plus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| || | | ||| ||||| |||| ||| | | | ||| | | ||
Sbjct 2157 AAAAGAAGTTCACGACCTATAGG-CCTTCTTCCTCCACACGGCATTGCTTCGTTTGGCTT 2215
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || ||||| || |||| |||||||||||||| ||| |||||||||||
Sbjct 2216 TCGCCCATTGCAGAAAATTCCCCATTGCTACCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 2275
Query 201 TTCCAATGTGG 211
| ||| |||||
Sbjct 2276 TCCCAGTGTGG 2286
>seq237345
Length=1774
Score = 75.2 bits (82), Expect = 2e-11
Identities = 64/79 (81%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 133 TCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCG 192
|||| || ||| |||||| || ||||| ||||||| |||||||||||||| | | ||
Sbjct 1310 TCAGGCTTTCGCCCATTGTAGAAAATTCCCCACTGCTACCTCCCGTAGGAGTCTAGGCCA 1369
Query 193 TGTCTCAGTTCCAATGTGG 211
||||||||| ||| |||||
Sbjct 1370 TGTCTCAGTCCCAGTGTGG 1388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1064567284800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |