Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq213916 324 3e-86 seq231982 147 5e-33 seq395726 127 4e-27 seq395746 116 8e-24 seq385033 104 5e-20 seq192414 96.9 7e-18 seq48036 93.3 9e-17 seq376176 89.7 1e-15 seq164005 86.0 1e-14 seq322062 84.2 5e-14 seq237345 75.2 2e-11 >seq213916 Length=1123 Score = 324 bits (358), Expect = 3e-86 Identities = 275/333 (83%), Gaps = 7/333 (2%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||||||||||||||||||||||| || |||| | ||| | | ||| Sbjct 752 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCTTACAGTACTTGCAA--TGCATTACGC 809 Query 61 GGAAGG--TTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCAC 118 | || | ||||| ||| |||||||||||||||||| || || | || |||||||| Sbjct 810 GTAACGCATTTTACTCCTGTATAAAAGAAGTTTACAACCCATAAGGCAGTCTTCCTTCAC 869 Query 119 GCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGT 178 || ||||||||||||||| || ||| |||||||||||||||||||||||||||||||||| Sbjct 870 GCGACTTGGCTGGTTCAGGCTATCGCCCATTGACCAATATTCCTCACTGCTGCCTCCCGT 929 Query 179 AGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCC 238 |||||| ||| |||||||||||||||| ||||||||| | |||||||| ||||||||| Sbjct 930 AGGAGTCTGGTCCGTGTCTCAGTTCCAGTGTGGGGGATCGACCTCTCAGTTCCCCTATCC 989 Query 239 ATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTA 298 ||||| | || |||| ||||||||| | || |||| |||||||||||||| |||||| || Sbjct 990 ATCGTTGCCTTGGTGAGCCGTTACCTCACCAACTAGCTAATGGAACGCATGCCCATC-TA 1048 Query 299 C-ACCGATGAATCTTTAATGATGATACCATGCA 330 | ||||| | ||||||| | ||||||||| Sbjct 1049 CTACCGAAG-TTCTTTAACAAATTTACCATGCA 1080 >seq231982 Length=852 Score = 147 bits (162), Expect = 5e-33 Identities = 152/198 (77%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCT 141 |||| | ||||||| ||| || ||||| || | ||||| | |||||| |||| | Sbjct 493 AAAGTACTTTACAACCCGAAGG-CCTTCTTCATACACGCGGCATGGCTGCATCAGGGTTC 551 Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201 | |||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct 552 CCCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 611 Query 202 TCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTA 261 |||| ||||| | | |||||||||| | ||| ||||| | || ||| ||| ||| Sbjct 612 TCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGAGATCGTCGCCTTGGTAAGCCATTA 671 Query 262 CCCCGCCTACTACCTAAT 279 ||| || |||| ||||| Sbjct 672 CCCTACCAACTAGCTAAT 689 >seq395726 Length=26030 Score = 127 bits (140), Expect = 4e-27 Identities = 195/279 (70%), Gaps = 18/279 (6%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| || ||| || | Sbjct 9173 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATACCGTCAT-----------T 9221 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | |||||||||| || | |||||| ||||| ||| ||||| Sbjct 9222 GC------TTCTTCTCCGGGAAAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACGC 9274 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || ||||| |||||||||||||||||| Sbjct 9275 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 9334 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| || Sbjct 9335 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 9394 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | | || ||| || || || | || |||| ||||| Sbjct 9395 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 9433 >seq395746 Length=4806 Score = 116 bits (128), Expect = 8e-24 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| || Sbjct 3022 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 2963 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||| ||||| ||||| || |||||||||||| ||| ||||| || | ||| Sbjct 2962 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 2903 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284 ||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| || Sbjct 2902 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 2843 Query 285 GCATCCCCATCGTACACCG 303 ||| | |||| ||| || Sbjct 2842 GCAGGCTCATCAAACAGCG 2824 >seq385033 Length=304 Score = 104 bits (114), Expect = 5e-20 Identities = 83/100 (83%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 180 GGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCA 239 ||||||||| |||||||||||| ||||||||| ||| | |||||||||| || |||| | Sbjct 1 GGAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCGGATCATCCTCTCAGACCCGCTATGGA 60 Query 240 TCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 |||| | || ||| |||| ||||||| || |||| ||||| Sbjct 61 TCGTCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAAT 100 >seq192414 Length=2565 Score = 96.9 bits (106), Expect = 7e-18 Identities = 142/199 (71%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | || | | ||||| ||| ||||| | | ||| |||| || Sbjct 1544 AAAAGAAGTTCACCACCCATGG--CCTTCTACCTCCACGCAGCATTGCTCCGTCAGGCTT 1601 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 | |||||| || ||||| |||||||||||||| ||||||| ||| ||||||| || Sbjct 1602 TTACCCATTGCAAAAAATTCCCCACTGCTGCCTCCCATAGGAGTCTGG-GCGTGTCTTAG 1660 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | | | ||||| || | |||||||||| | ||| ||| | | || ||| ||| || Sbjct 1661 TCCTAGTGTGGTTGATCATCCTCTCAGACCAGCTACTGATCATCGCCTTGGTAGGCTATT 1720 Query 261 ACCCCGCCTACTACCTAAT 279 || | || |||| ||||| Sbjct 1721 GCCTCACCAACTAGCTAAT 1739 >seq48036 Length=1819 Score = 93.3 bits (102), Expect = 9e-17 Identities = 110/148 (74%), Gaps = 1/148 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| | | |||||| ||||| ||| | || | | ||| |||| || Sbjct 1496 AAAAGAAGTTCAAGACCCGTAGG-CCTTCTACCTCTATGCGGCATTGCTCCGTCAGGCTT 1438 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||| |||||||||||||||||||||||||| || |||||||| Sbjct 1437 TCGCCCATTGCAGAAAATTTTCCACTGCTGCCTCCCGTAGGAGTTTGGGCCATGTCTCAG 1378 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGA 228 | | | ||||| || | |||||| ||| Sbjct 1377 TCCTAGTGTGGCTGATCATCCTCTTAGA 1350 >seq376176 Length=1945 Score = 89.7 bits (98), Expect = 1e-15 Identities = 112/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| | | || ||| ||||| ||| ||||| || | ||| ||| | Sbjct 1757 AAAAGAAGTTCATGACCCATAGG-CCTTCTACCTCCACGCGACATTGCTCCATCAAGGTT 1815 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 || |||||| || ||||| |||| ||||||||||||||||| || ||||||||||| Sbjct 1816 TCACCCATTGCAAAAAATTCCCCACTACTGCCTCCCGTAGGAGTCTGTGCCGTGTCTCAG 1875 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACC 231 | ||| ||||| | | ||||||| ||||| Sbjct 1876 TCCCAGTGTGGCTAATCATCCTCTC-GAACC 1905 >seq164005 Length=1644 Score = 86.0 bits (94), Expect = 1e-14 Identities = 139/199 (70%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| |||| || ||| ||||| ||| | || | | ||| |||| | Sbjct 1001 AAAAGAAGTTCACAACCCATAGG-CCTTCTACCTCTAGGCAGCATTGCTCTGTCAGGCGT 1059 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || |||| ||||| ||||||||||| |||| ||| |||||||| Sbjct 1060 TCGCCCATTGTAGAAAATTCTCCACTGTTGCCTCCCGTAAGAGTCTGGGATATGTCTCAG 1119 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | | | ||||| || | |||||||||| | ||| ||| | | || ||| || || Sbjct 1120 TCCTAGTGTGGCTGATCATCCTCTCAGACCAGCTACTAATCATCGCCTTGGTAAGCTATT 1179 Query 261 ACCCCGCCTACTACCTAAT 279 |||| | |||| ||||| Sbjct 1180 GCCCCATCAACTAGCTAAT 1198 >seq322062 Length=3318 Score = 84.2 bits (92), Expect = 5e-14 Identities = 98/131 (75%), Gaps = 1/131 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | | ||| ||||| |||| ||| | | | ||| | | || Sbjct 2157 AAAAGAAGTTCACGACCTATAGG-CCTTCTTCCTCCACACGGCATTGCTTCGTTTGGCTT 2215 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| || |||| |||||||||||||| ||| ||||||||||| Sbjct 2216 TCGCCCATTGCAGAAAATTCCCCATTGCTACCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 2275 Query 201 TTCCAATGTGG 211 | ||| ||||| Sbjct 2276 TCCCAGTGTGG 2286 >seq237345 Length=1774 Score = 75.2 bits (82), Expect = 2e-11 Identities = 64/79 (81%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 133 TCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCG 192 |||| || ||| |||||| || ||||| ||||||| |||||||||||||| | | || Sbjct 1310 TCAGGCTTTCGCCCATTGTAGAAAATTCCCCACTGCTACCTCCCGTAGGAGTCTAGGCCA 1369 Query 193 TGTCTCAGTTCCAATGTGG 211 ||||||||| ||| ||||| Sbjct 1370 TGTCTCAGTCCCAGTGTGG 1388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1064567284800