Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09]
396,025 sequences; 631,307,653 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq302503 235 9e-60
seq396017 107 3e-21
seq58609 87.8 3e-15
seq352053 84.2 4e-14
seq316011 84.2 4e-14
seq250982 84.2 4e-14
seq303973 77.0 5e-12
seq170838 77.0 5e-12
>seq302503
Length=234
Score = 235 bits (260), Expect = 9e-60
Identities = 176/201 (88%), Gaps = 4/201 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| ||||||||||||||||||||||||| |||||||
Sbjct 3 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 60
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||
Sbjct 61 GCCGCGAAGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 120
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTC-GGCCCCGA 178
||||| || ||| | || |||| | ||||| ||||||||||||| |||| |||| |||
Sbjct 121 GAACGCGGCGATATTGCCCCGCACGTTGTAGTTGGATACGAATAGGCCTTCGGGCCACGA 180
Query 179 ACCTTAGCAGGCCGGCAACGG 199
|||| ||||||| ||| ||||
Sbjct 181 ACCTCAGCAGGCTGGCGACGG 201
>seq396017
Length=8487
Score = 107 bits (118), Expect = 3e-21
Identities = 99/123 (80%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | | ||||||| | ||| || ||| || ||||
Sbjct 7168 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 7225
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||||||||||| |||||||||||||||||||||||| || |
Sbjct 7226 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 7285
Query 121 GAA 123
|||
Sbjct 7286 GAA 7288
>seq58609
Length=2386
Score = 87.8 bits (96), Expect = 3e-15
Identities = 95/122 (78%), Gaps = 3/122 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | || ||| |||||||||| | | || ||| | |||
Sbjct 2217 GTACGAGAGGAACCGTAGGTTT-AGAC-AATTGGTTTT-GTGTTTGATTGAAAAATCAGA 2161
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| | | || ||||||||| ||||||||| ||||||||||||||||||||||||| |||
Sbjct 2160 GGCACTAAACTACCATCTAATGGATTATGACTGAACGCCTCTAAGTCAGAATCCAATCCA 2101
Query 121 GA 122
||
Sbjct 2100 GA 2099
>seq352053
Length=411
Score = 84.2 bits (92), Expect = 4e-14
Identities = 94/123 (76%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | | ||||||| | | || ||| || ||||
Sbjct 67 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCACACTTGGTTGAAAAGCCAGT 124
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||| | ||||||||||| || ||||||||||||||||||||| || |
Sbjct 125 GGGGCGAAGCTACTGTGCGCTGGATTATGACTAAACGCCTCTAAGTCAGAATCCGGGCTA 184
Query 121 GAA 123
|||
Sbjct 185 GAA 187
>seq316011
Length=1654
Score = 84.2 bits (92), Expect = 4e-14
Identities = 88/113 (78%), Gaps = 2/113 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||| || ||| | | ||||||| | | | || ||| || ||||
Sbjct 1648 GTACGAGAGGAACCATTGA-TTC-GCACAATTGGTCATCGTGCTTGGTTGAAAAGCCAGT 1591
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
| |||||||||||| | ||||||||||| ||||| ||||| |||||||||||
Sbjct 1590 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAAAGCCTCAAAGTCAGAATC 1538
>seq250982
Length=275
Score = 84.2 bits (92), Expect = 4e-14
Identities = 88/113 (78%), Gaps = 2/113 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || ||| | | ||||||| | ||| || ||| || |||
Sbjct 15 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCTAGT 72
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
| ||| |||||| | | |||||||||||| ||||||||||| | |||||||||
Sbjct 73 GGCGCAAAGCTATCGTGTGCTGGATTATGACTGAACGCCTCAATGTCAGAATC 125
>seq303973
Length=586
Score = 77.0 bits (84), Expect = 5e-12
Identities = 51/57 (89%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
||||| |||||||||||| | ||||||||||| ||||||| |||||||||||||||
Sbjct 236 CAGTGGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGTCTCTAAGTCAGAATC 180
>seq170838
Length=1463
Score = 77.0 bits (84), Expect = 5e-12
Identities = 51/57 (89%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
||||| |||||||||||| | ||||||||||| ||||||| |||||||||||||||
Sbjct 3 CAGTGGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGTCTCTAAGTCAGAATC 59
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 816057145600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |