Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03] 221,855 sequences; 236,770,010 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq221703 93.3 4e-17 seq199656 93.3 4e-17 seq192614 93.3 4e-17 seq86112 93.3 4e-17 seq221845 91.5 2e-16 seq221316 89.7 5e-16 seq221793 87.8 2e-15 seq221783 87.8 2e-15 seq221733 87.8 2e-15 seq198046 87.8 2e-15 seq193347 87.8 2e-15 seq109950 87.8 2e-15 seq94340 87.8 2e-15 seq30330 87.8 2e-15 seq50278 78.8 1e-12 seq1641 75.2 1e-11 seq79182 73.4 4e-11 >seq221703 Length=349 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 281 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 224 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 223 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 174 >seq199656 Length=385 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 148 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 91 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 90 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 41 >seq192614 Length=255 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| || Sbjct 112 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAAGG 53 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 52 --GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 5 >seq86112 Length=408 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 197 TAAGGAACTCGGCAAAATAGCCCAGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 140 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 139 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 90 >seq221845 Length=315 Score = 91.5 bits (100), Expect = 2e-16 Identities = 89/111 (80%), Gaps = 4/111 (4%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACT-GACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATG 138 ||||||||| |||||| | ||||| |||||||||||| || |||| ||| | || ||| Sbjct 281 TAAGGAACTCGGCAAAATAGACCC-GTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA-- 225 Query 139 GGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 || || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 224 GGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 174 >seq221316 Length=750 Score = 89.7 bits (98), Expect = 5e-16 Identities = 123/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | || || ||||||| |||||||||| ||| || | |||| Sbjct 260 AAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAGG 319 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGG 144 |||| |||||| |||||| |||||||||||| || |||| | || || || | | Sbjct 320 AACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTCCTTGATTAGGAAAGC 379 Query 145 CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 ||| | | ||| || |||||||| ||||||||||| || ||| || Sbjct 380 GGCACATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAA 431 >seq221793 Length=244 Score = 87.8 bits (96), Expect = 2e-15 Identities = 86/110 (78%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 155 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 98 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| ||||| |||||| || Sbjct 97 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAACCACAGGTCT 48 >seq221783 Length=285 Score = 87.8 bits (96), Expect = 2e-15 Identities = 86/110 (78%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || || | ||| | || ||| | Sbjct 273 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGTTGCCTCCTCACAAA--G 216 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 215 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 166 >seq221733 Length=362 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/105 (79%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 285 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 228 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACA 184 | || ||||| || ||| || ||| |||||||| |||||||||| Sbjct 227 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACA 183 >seq198046 Length=290 Score = 87.8 bits (96), Expect = 2e-15 Identities = 86/110 (78%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || | | | Sbjct 110 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACACA--G 53 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 52 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 3 >seq193347 Length=487 Score = 87.8 bits (96), Expect = 2e-15 Identities = 86/110 (78%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 294 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 237 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| ||||||| |||||||||||| || Sbjct 236 GGGGTCGCAGTGACCAGGCCCGGGCGTCTGTTTACCAAAAACACAGGTCT 187 >seq109950 Length=259 Score = 87.8 bits (96), Expect = 2e-15 Identities = 86/110 (78%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 108 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 51 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || || |||||||| |||||||||||| || Sbjct 50 GGGGTCGCAGTGACCAGGCCCGGGTGACTGTTTACCAAAAACACAGGTCT 1 >seq94340 Length=364 Score = 87.8 bits (96), Expect = 2e-15 Identities = 86/110 (78%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 138 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 81 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || || |||||||| |||||||||||| || Sbjct 80 GGGGTCGCAGTGACCAGGCCCGGGAGACTGTTTACCAAAAACACAGGTCT 31 >seq30330 Length=1839 Score = 87.8 bits (96), Expect = 2e-15 Identities = 90/117 (77%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | | | |||||||||||| ||||||| ||| | | ||| | Sbjct 1727 TAAGGAACTCGGCAAAATAGCTCCGTAACTTCGGGAGAAAGGGTGCCTCCTCCCAAA--G 1670 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | || |||| || ||| || ||| |||||||| |||||||||||| || ||| || Sbjct 1669 GGGGTTGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCTGCAAA 1613 >seq50278 Length=14691 Score = 78.8 bits (86), Expect = 1e-12 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| || Sbjct 164 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAAGG 223 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || | || || ||| || || |||||||| |||||||||| | || ||| || Sbjct 224 --GGTTGTAGTGACCAGGCCCGAGCGACTGTTTACCAAAAACACAAGTCTATGCAAA 278 >seq1641 Length=5786 Score = 75.2 bits (82), Expect = 1e-11 Identities = 81/107 (76%), Gaps = 3/107 (3%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| || ||| | ||| |||||||||||| || |||| ||| | || ||| Sbjct 1899 TAAGGAACTCGGAAAAATACCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCAAAAA--- 1843 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGG 186 | || | ||| || ||| || || |||||||| |||||||||||| Sbjct 1842 GGGGTCACAGTGACCAGGCCCGAGCGACTGTTTACCAAAAACACAGG 1796 >seq79182 Length=262 Score = 73.4 bits (80), Expect = 4e-11 Identities = 73/94 (78%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 94 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCGCACAAA--G 37 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTA 173 | || ||||| || ||| || ||| |||||||| Sbjct 36 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTA 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530058334170