Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03]
221,855 sequences; 236,770,010 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq221703 93.3 4e-17
seq199656 93.3 4e-17
seq192614 93.3 4e-17
seq86112 93.3 4e-17
seq221845 91.5 2e-16
seq221316 89.7 5e-16
seq221793 87.8 2e-15
seq221783 87.8 2e-15
seq221733 87.8 2e-15
seq198046 87.8 2e-15
seq193347 87.8 2e-15
seq109950 87.8 2e-15
seq94340 87.8 2e-15
seq30330 87.8 2e-15
seq50278 78.8 1e-12
seq1641 75.2 1e-11
seq79182 73.4 4e-11
>seq221703
Length=349
Score = 93.3 bits (102), Expect = 4e-17
Identities = 87/110 (79%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| |
Sbjct 281 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 224
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| || ||| |||||||| |||||||||||| ||
Sbjct 223 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 174
>seq199656
Length=385
Score = 93.3 bits (102), Expect = 4e-17
Identities = 87/110 (79%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| |
Sbjct 148 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 91
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| || ||| |||||||| |||||||||||| ||
Sbjct 90 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 41
>seq192614
Length=255
Score = 93.3 bits (102), Expect = 4e-17
Identities = 87/110 (79%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| ||
Sbjct 112 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAAGG 53
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
|| ||||| || ||| || ||| |||||||| |||||||||||| ||
Sbjct 52 --GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 5
>seq86112
Length=408
Score = 93.3 bits (102), Expect = 4e-17
Identities = 87/110 (79%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| |
Sbjct 197 TAAGGAACTCGGCAAAATAGCCCAGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 140
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| || ||| |||||||| |||||||||||| ||
Sbjct 139 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 90
>seq221845
Length=315
Score = 91.5 bits (100), Expect = 2e-16
Identities = 89/111 (80%), Gaps = 4/111 (4%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACT-GACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATG 138
||||||||| |||||| | ||||| |||||||||||| || |||| ||| | || |||
Sbjct 281 TAAGGAACTCGGCAAAATAGACCC-GTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA-- 225
Query 139 GGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
|| || ||||| || ||| || ||| |||||||| |||||||||||| ||
Sbjct 224 GGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 174
>seq221316
Length=750
Score = 89.7 bits (98), Expect = 5e-16
Identities = 123/172 (72%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84
|||| |||||| || | || || ||||||| |||||||||| ||| || | ||||
Sbjct 260 AAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAGG 319
Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGG 144
|||| |||||| |||||| |||||||||||| || |||| | || || || | |
Sbjct 320 AACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTCCTTGATTAGGAAAGC 379
Query 145 CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
||| | | ||| || |||||||| ||||||||||| || ||| ||
Sbjct 380 GGCACATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAA 431
>seq221793
Length=244
Score = 87.8 bits (96), Expect = 2e-15
Identities = 86/110 (78%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| |
Sbjct 155 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 98
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| || ||| |||||||| ||||| |||||| ||
Sbjct 97 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAACCACAGGTCT 48
>seq221783
Length=285
Score = 87.8 bits (96), Expect = 2e-15
Identities = 86/110 (78%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || || | ||| | || ||| |
Sbjct 273 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGTTGCCTCCTCACAAA--G 216
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| || ||| |||||||| |||||||||||| ||
Sbjct 215 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 166
>seq221733
Length=362
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/105 (79%), Gaps = 2/105 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| |
Sbjct 285 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 228
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACA 184
| || ||||| || ||| || ||| |||||||| ||||||||||
Sbjct 227 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACA 183
>seq198046
Length=290
Score = 87.8 bits (96), Expect = 2e-15
Identities = 86/110 (78%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || | | |
Sbjct 110 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACACA--G 53
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| || ||| |||||||| |||||||||||| ||
Sbjct 52 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 3
>seq193347
Length=487
Score = 87.8 bits (96), Expect = 2e-15
Identities = 86/110 (78%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| |
Sbjct 294 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 237
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| || ||| ||||||| |||||||||||| ||
Sbjct 236 GGGGTCGCAGTGACCAGGCCCGGGCGTCTGTTTACCAAAAACACAGGTCT 187
>seq109950
Length=259
Score = 87.8 bits (96), Expect = 2e-15
Identities = 86/110 (78%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| |
Sbjct 108 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 51
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| || || |||||||| |||||||||||| ||
Sbjct 50 GGGGTCGCAGTGACCAGGCCCGGGTGACTGTTTACCAAAAACACAGGTCT 1
>seq94340
Length=364
Score = 87.8 bits (96), Expect = 2e-15
Identities = 86/110 (78%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| |
Sbjct 138 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 81
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| || || |||||||| |||||||||||| ||
Sbjct 80 GGGGTCGCAGTGACCAGGCCCGGGAGACTGTTTACCAAAAACACAGGTCT 31
>seq30330
Length=1839
Score = 87.8 bits (96), Expect = 2e-15
Identities = 90/117 (77%), Gaps = 2/117 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | | | |||||||||||| ||||||| ||| | | ||| |
Sbjct 1727 TAAGGAACTCGGCAAAATAGCTCCGTAACTTCGGGAGAAAGGGTGCCTCCTCCCAAA--G 1670
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
| || |||| || ||| || ||| |||||||| |||||||||||| || ||| ||
Sbjct 1669 GGGGTTGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCTGCAAA 1613
>seq50278
Length=14691
Score = 78.8 bits (86), Expect = 1e-12
Identities = 88/117 (75%), Gaps = 2/117 (2%)
Strand=Plus/Plus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| ||
Sbjct 164 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAAGG 223
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|| | || || ||| || || |||||||| |||||||||| | || ||| ||
Sbjct 224 --GGTTGTAGTGACCAGGCCCGAGCGACTGTTTACCAAAAACACAAGTCTATGCAAA 278
>seq1641
Length=5786
Score = 75.2 bits (82), Expect = 1e-11
Identities = 81/107 (76%), Gaps = 3/107 (3%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| || ||| | ||| |||||||||||| || |||| ||| | || |||
Sbjct 1899 TAAGGAACTCGGAAAAATACCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCAAAAA--- 1843
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGG 186
| || | ||| || ||| || || |||||||| ||||||||||||
Sbjct 1842 GGGGTCACAGTGACCAGGCCCGAGCGACTGTTTACCAAAAACACAGG 1796
>seq79182
Length=262
Score = 73.4 bits (80), Expect = 4e-11
Identities = 73/94 (78%), Gaps = 2/94 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| |
Sbjct 94 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCGCACAAA--G 37
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTA 173
| || ||||| || ||| || ||| ||||||||
Sbjct 36 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTA 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 530058334170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |