Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03]
221,855 sequences; 236,770,010 total letters
Query= AAMG01000599.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq221316 91.5 1e-16
seq221845 87.8 2e-15
seq221783 87.8 2e-15
seq221738 87.8 2e-15
seq221737 87.8 2e-15
seq221717 87.8 2e-15
seq221847 84.2 2e-14
seq221843 84.2 2e-14
seq221770 84.2 2e-14
seq221733 84.2 2e-14
seq221712 84.2 2e-14
seq221703 84.2 2e-14
seq193347 84.2 2e-14
seq86112 84.2 2e-14
seq221701 82.4 7e-14
seq221726 78.8 9e-13
>seq221316
Length=750
Score = 91.5 bits (100), Expect = 1e-16
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||||| | ||||||||||||||||||||||| ||||||| || | || ||
Sbjct 385 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 444
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
|||||| || |||| |||||||||||| |||||||
Sbjct 445 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 479
>seq221845
Length=315
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 221 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 162
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 161 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 116
>seq221783
Length=285
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 213 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 154
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 153 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 108
>seq221738
Length=266
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 240 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 181
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 180 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 135
>seq221737
Length=274
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 264 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGATCTCCGCAAAGTCGT 205
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 204 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 159
>seq221717
Length=370
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 334 GGTCGCAGTGACCAGGCCAGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 275
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 274 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 229
>seq221847
Length=239
Score = 84.2 bits (92), Expect = 2e-14
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||| ||| |||||||||| ||| ||||| ||
Sbjct 212 GGTCGCAGTGACCAGGCCCGGGCGACTGCTTACCAAAAACACAGGTCTCCGCAAAGTCGT 153
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 152 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 107
>seq221843
Length=235
Score = 84.2 bits (92), Expect = 2e-14
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| |||||||| || |||||||||| ||| ||||| ||
Sbjct 216 GGTCGCAGTGACCAGGCCCGGGCGACTGTGTACCAAAAACACAGGTCTCCGCAAAGTCGT 157
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 156 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 111
>seq221770
Length=243
Score = 84.2 bits (92), Expect = 2e-14
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116
|||||||| ||||||||||| |||||||||| ||| ||||| || ||| | ||
Sbjct 239 ACCAGGCCCGGGCGACTGTTTACAAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGT 180
Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
|| ||| |||||||||||| |||||||||||| ||
Sbjct 179 ATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 144
>seq221733
Length=362
Score = 84.2 bits (92), Expect = 2e-14
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| ||||||||| ||| ||||| ||
Sbjct 225 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACATGTCTCCGCAAAGTCGT 166
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 165 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 120
>seq221712
Length=310
Score = 84.2 bits (92), Expect = 2e-14
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| || ||||| ||
Sbjct 304 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTACGCAAAGTCGT 245
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 244 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 199
>seq221703
Length=349
Score = 84.2 bits (92), Expect = 2e-14
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 221 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 162
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | | || ||| |||||||||||| |||||||||||| ||
Sbjct 161 AAGACCATGGATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 116
>seq193347
Length=487
Score = 84.2 bits (92), Expect = 2e-14
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||| ||||||| |||||||||| ||| ||||| ||
Sbjct 234 GGTCGCAGTGACCAGGCCCGGGCGTCTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 175
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 174 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 129
>seq86112
Length=408
Score = 84.2 bits (92), Expect = 2e-14
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 137 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 78
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| ||||||| |||| |||||||||||| ||
Sbjct 77 AAGACCATGTATGGGGGCTGACGCCGGCCCAGTGCCGGAAGGTCAA 32
>seq221701
Length=248
Score = 82.4 bits (90), Expect = 7e-14
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127
||||||||||| |||||||||| ||| ||||| ||| ||| | |||| ||| |||
Sbjct 241 GCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGACGTAAGACCATGTATGGGGGCTGA 182
Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152
||||||||| |||||||||||| ||
Sbjct 181 CGCCTGCCCAGTGCCGGAAGGTCAA 157
>seq221726
Length=279
Score = 78.8 bits (86), Expect = 9e-13
Identities = 75/96 (78%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116
|||||||| ||||||||||| |||||||||| ||| ||||| | ||| | ||
Sbjct 279 ACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTTGTAAGACCATGT 220
Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
|| ||| |||||||||||| |||||||||||| ||
Sbjct 219 ATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475775251755
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |