Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03]
221,855 sequences; 236,770,010 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq221316 107 2e-21
seq221680 104 3e-20
seq220735 104 3e-20
seq221719 98.7 1e-18
seq221717 98.7 1e-18
seq221712 98.7 1e-18
seq220710 98.7 1e-18
seq221726 96.9 4e-18
seq221770 93.3 5e-17
seq221738 93.3 5e-17
seq221737 93.3 5e-17
seq221701 93.3 5e-17
seq220864 93.3 5e-17
seq193347 93.3 5e-17
seq221733 91.5 2e-16
seq1641 89.7 6e-16
seq221845 84.2 2e-14
seq221843 80.6 3e-13
seq221703 80.6 3e-13
seq69881 75.2 1e-11
seq221847 73.4 4e-11
>seq221316
Length=750
Score = 107 bits (118), Expect = 2e-21
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
||||||||| |||| || |||| || |||||||||| || | | ||||||||| |
Sbjct 689 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 630
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
| || | ||||||| |||||||||||||||||||| ||||| |
Sbjct 629 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 570
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||| ||||
Sbjct 569 GACAAGGAATTTCGCTACCTTAGGACAGTTA 539
>seq221680
Length=585
Score = 104 bits (114), Expect = 3e-20
Identities = 112/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| || |||| || |||||||||| || | | |||| || |||
Sbjct 305 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTAACCGAG 364
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 365 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 423
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 424 ACAAGGAATTTCGCTACCTTAGGACCGTTA 453
>seq220735
Length=325
Score = 104 bits (114), Expect = 3e-20
Identities = 112/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| || |||| || |||||||||| || | | ||||||| |||
Sbjct 146 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 205
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 206 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 264
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||| |||||||||||||||||||||||
Sbjct 265 ACAAGGTATTTCGCTACCTTAGGACCGTTA 294
>seq221719
Length=264
Score = 98.7 bits (108), Expect = 1e-18
Identities = 97/127 (76%), Gaps = 2/127 (2%)
Strand=Plus/Plus
Query 48 TAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGNNNNNN 106
|| || |||||||||| || | | ||||||| |||| | | | |||||||
Sbjct 15 TAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGC-CTCTCTCCGAGACAGTGCCCA 73
Query 107 NNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 166
||| || ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 74 GATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 133
Query 167 ACCGTTA 173
|||||||
Sbjct 134 ACCGTTA 140
>seq221717
Length=370
Score = 98.7 bits (108), Expect = 1e-18
Identities = 111/150 (74%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| ||| || |||| || |||||||||| || | | ||||||| |||
Sbjct 14 GGGTCTTTCTATCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 73
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 74 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 132
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||| ||||||||||
Sbjct 133 ACAAGGAATTTCGCTACCTGAGGACCGTTA 162
>seq221712
Length=310
Score = 98.7 bits (108), Expect = 1e-18
Identities = 100/132 (76%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 43 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGN 101
|| |||| || |||||||||| || | | ||||||| |||| | | | || ||||
Sbjct 2 GCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGC-CTCTCTCCGATACAGT 60
Query 102 NNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 161
||| || ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 61 GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
Query 162 TTAGGACCGTTA 173
||||||||||||
Sbjct 121 TTAGGACCGTTA 132
>seq220710
Length=419
Score = 98.7 bits (108), Expect = 1e-18
Identities = 100/132 (76%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 43 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGN 101
|| |||| || |||||||||| || | | ||||||| |||| | | | |||||||
Sbjct 154 GCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGC-CTCTCTCCGAGACAGT 212
Query 102 NNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 161
||| || ||||||| |||||||||||||||||||| |||||||||||||
Sbjct 213 GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAATGAATTTCGCTACC 272
Query 162 TTAGGACCGTTA 173
||||||||||||
Sbjct 273 TTAGGACCGTTA 284
>seq221726
Length=279
Score = 96.9 bits (106), Expect = 4e-18
Identities = 58/61 (95%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 57 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 116
Query 173 A 173
|
Sbjct 117 A 117
>seq221770
Length=243
Score = 93.3 bits (102), Expect = 5e-17
Identities = 57/61 (93%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| || ||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 17 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAAATTCGCTACCTTAGGACCGTT 76
Query 173 A 173
|
Sbjct 77 A 77
>seq221738
Length=266
Score = 93.3 bits (102), Expect = 5e-17
Identities = 57/61 (93%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| || ||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 8 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTAACTTAGGACCGTT 67
Query 173 A 173
|
Sbjct 68 A 68
>seq221737
Length=274
Score = 93.3 bits (102), Expect = 5e-17
Identities = 57/61 (93%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| || ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 32 TACGCCTTTCGTGCGGGTCGGAATTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 91
Query 173 A 173
|
Sbjct 92 A 92
>seq221701
Length=248
Score = 93.3 bits (102), Expect = 5e-17
Identities = 57/61 (93%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| || | ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 30 TACGCCTTGCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 89
Query 173 A 173
|
Sbjct 90 A 90
>seq220864
Length=226
Score = 93.3 bits (102), Expect = 5e-17
Identities = 105/142 (74%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| || |||| || |||||||||| || | | ||||||| |||
Sbjct 86 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 145
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 146 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACTCCTTTCGTGCGGGTCGGAACTTACCCG 204
Query 144 ACAAGGAATTTCGCTACCTTAG 165
||||||||||||||||||||||
Sbjct 205 ACAAGGAATTTCGCTACCTTAG 226
>seq193347
Length=487
Score = 93.3 bits (102), Expect = 5e-17
Identities = 57/61 (93%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| || ||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCCACCTTAGGACCGTT 61
Query 173 A 173
|
Sbjct 62 A 62
>seq221733
Length=362
Score = 91.5 bits (100), Expect = 2e-16
Identities = 52/53 (98%), Gaps = 0/53 (0%)
Strand=Plus/Plus
Query 121 TCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 53
>seq1641
Length=5786
Score = 89.7 bits (98), Expect = 6e-16
Identities = 109/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|| ||||| ||| | || |||| || ||||||||| || | | ||||||| |||
Sbjct 1520 GGATCTTTCTATCCAAGTGCAGGTAGTCCGCATCTTCATAGACATGTCTATTTCACCGAG 1579
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || |||||||||||| |||||||||||
Sbjct 1580 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCAGGTCAGAACTTACCCG 1638
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||| |||||||||||||||| |||
Sbjct 1639 ACAAGGAATATCGCTACCTTAGGACCATTA 1668
>seq221845
Length=315
Score = 84.2 bits (92), Expect = 2e-14
Identities = 48/49 (98%), Gaps = 0/49 (0%)
Strand=Plus/Plus
Query 125 GCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 49
>seq221843
Length=235
Score = 80.6 bits (88), Expect = 3e-13
Identities = 44/44 (100%), Gaps = 0/44 (0%)
Strand=Plus/Plus
Query 130 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 44
>seq221703
Length=349
Score = 80.6 bits (88), Expect = 3e-13
Identities = 47/49 (96%), Gaps = 0/49 (0%)
Strand=Plus/Plus
Query 125 GCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1 GCGGGTCGGAACTTACCCGACAAGGAATTTCACTACCTTAGGACCGTTA 49
>seq69881
Length=978
Score = 75.2 bits (82), Expect = 1e-11
Identities = 53/61 (87%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
|||||| || |||||||| | || ||| | |||||||||||||||||||||| |||||||
Sbjct 480 TACACCTTTTGTGCAGGTTGAAATTTATCGGACAAGGAATTTCGCTACCTTATGACCGTT 421
Query 173 A 173
|
Sbjct 420 A 420
>seq221847
Length=239
Score = 73.4 bits (80), Expect = 4e-11
Identities = 40/40 (100%), Gaps = 0/40 (0%)
Strand=Plus/Plus
Query 134 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 40
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546023946645
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |