Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03] 221,855 sequences; 236,770,010 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq221316 107 2e-21 seq221680 104 3e-20 seq220735 104 3e-20 seq221719 98.7 1e-18 seq221717 98.7 1e-18 seq221712 98.7 1e-18 seq220710 98.7 1e-18 seq221726 96.9 4e-18 seq221770 93.3 5e-17 seq221738 93.3 5e-17 seq221737 93.3 5e-17 seq221701 93.3 5e-17 seq220864 93.3 5e-17 seq193347 93.3 5e-17 seq221733 91.5 2e-16 seq1641 89.7 6e-16 seq221845 84.2 2e-14 seq221843 80.6 3e-13 seq221703 80.6 3e-13 seq69881 75.2 1e-11 seq221847 73.4 4e-11 >seq221316 Length=750 Score = 107 bits (118), Expect = 2e-21 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| || |||| || |||||||||| || | | ||||||||| | Sbjct 689 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 630 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | ||||||| |||||||||||||||||||| ||||| | Sbjct 629 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 570 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||| |||| Sbjct 569 GACAAGGAATTTCGCTACCTTAGGACAGTTA 539 >seq221680 Length=585 Score = 104 bits (114), Expect = 3e-20 Identities = 112/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | |||| || ||| Sbjct 305 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTAACCGAG 364 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 365 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 423 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 424 ACAAGGAATTTCGCTACCTTAGGACCGTTA 453 >seq220735 Length=325 Score = 104 bits (114), Expect = 3e-20 Identities = 112/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 146 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 205 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 206 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 264 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||| ||||||||||||||||||||||| Sbjct 265 ACAAGGTATTTCGCTACCTTAGGACCGTTA 294 >seq221719 Length=264 Score = 98.7 bits (108), Expect = 1e-18 Identities = 97/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 48 TAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGNNNNNN 106 || || |||||||||| || | | ||||||| |||| | | | ||||||| Sbjct 15 TAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGC-CTCTCTCCGAGACAGTGCCCA 73 Query 107 NNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 166 ||| || ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 74 GATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 133 Query 167 ACCGTTA 173 ||||||| Sbjct 134 ACCGTTA 140 >seq221717 Length=370 Score = 98.7 bits (108), Expect = 1e-18 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| ||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 14 GGGTCTTTCTATCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 73 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 74 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 132 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||| |||||||||| Sbjct 133 ACAAGGAATTTCGCTACCTGAGGACCGTTA 162 >seq221712 Length=310 Score = 98.7 bits (108), Expect = 1e-18 Identities = 100/132 (76%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 43 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGN 101 || |||| || |||||||||| || | | ||||||| |||| | | | || |||| Sbjct 2 GCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGC-CTCTCTCCGATACAGT 60 Query 102 NNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 161 ||| || ||||||| |||||||||||||||||||||||||||||||||| Sbjct 61 GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 Query 162 TTAGGACCGTTA 173 |||||||||||| Sbjct 121 TTAGGACCGTTA 132 >seq220710 Length=419 Score = 98.7 bits (108), Expect = 1e-18 Identities = 100/132 (76%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 43 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGN 101 || |||| || |||||||||| || | | ||||||| |||| | | | ||||||| Sbjct 154 GCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGC-CTCTCTCCGAGACAGT 212 Query 102 NNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 161 ||| || ||||||| |||||||||||||||||||| ||||||||||||| Sbjct 213 GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAATGAATTTCGCTACC 272 Query 162 TTAGGACCGTTA 173 |||||||||||| Sbjct 273 TTAGGACCGTTA 284 >seq221726 Length=279 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 57 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 116 Query 173 A 173 | Sbjct 117 A 117 >seq221770 Length=243 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct 17 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAAATTCGCTACCTTAGGACCGTT 76 Query 173 A 173 | Sbjct 77 A 77 >seq221738 Length=266 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct 8 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTAACTTAGGACCGTT 67 Query 173 A 173 | Sbjct 68 A 68 >seq221737 Length=274 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 32 TACGCCTTTCGTGCGGGTCGGAATTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 91 Query 173 A 173 | Sbjct 92 A 92 >seq221701 Length=248 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || | ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 30 TACGCCTTGCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 89 Query 173 A 173 | Sbjct 90 A 90 >seq220864 Length=226 Score = 93.3 bits (102), Expect = 5e-17 Identities = 105/142 (74%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 86 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 145 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 146 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACTCCTTTCGTGCGGGTCGGAACTTACCCG 204 Query 144 ACAAGGAATTTCGCTACCTTAG 165 |||||||||||||||||||||| Sbjct 205 ACAAGGAATTTCGCTACCTTAG 226 >seq193347 Length=487 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCCACCTTAGGACCGTT 61 Query 173 A 173 | Sbjct 62 A 62 >seq221733 Length=362 Score = 91.5 bits (100), Expect = 2e-16 Identities = 52/53 (98%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 121 TCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 53 >seq1641 Length=5786 Score = 89.7 bits (98), Expect = 6e-16 Identities = 109/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 || ||||| ||| | || |||| || ||||||||| || | | ||||||| ||| Sbjct 1520 GGATCTTTCTATCCAAGTGCAGGTAGTCCGCATCTTCATAGACATGTCTATTTCACCGAG 1579 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || |||||||||||| ||||||||||| Sbjct 1580 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCAGGTCAGAACTTACCCG 1638 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||| |||||||||||||||| ||| Sbjct 1639 ACAAGGAATATCGCTACCTTAGGACCATTA 1668 >seq221845 Length=315 Score = 84.2 bits (92), Expect = 2e-14 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 125 GCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 49 >seq221843 Length=235 Score = 80.6 bits (88), Expect = 3e-13 Identities = 44/44 (100%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 130 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 44 >seq221703 Length=349 Score = 80.6 bits (88), Expect = 3e-13 Identities = 47/49 (96%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 125 GCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 || |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1 GCGGGTCGGAACTTACCCGACAAGGAATTTCACTACCTTAGGACCGTTA 49 >seq69881 Length=978 Score = 75.2 bits (82), Expect = 1e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| || |||||||| | || ||| | |||||||||||||||||||||| ||||||| Sbjct 480 TACACCTTTTGTGCAGGTTGAAATTTATCGGACAAGGAATTTCGCTACCTTATGACCGTT 421 Query 173 A 173 | Sbjct 420 A 420 >seq221847 Length=239 Score = 73.4 bits (80), Expect = 4e-11 Identities = 40/40 (100%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 134 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||||||||||||| Sbjct 1 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 40 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546023946645