Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03]
221,855 sequences; 236,770,010 total letters
Query= AAMG01001210.1
Length=647
Score E
Sequences producing significant alignments: (Bits) Value
seq11510 78.8 4e-12
seq51588 75.2 4e-11
>seq11510
Length=3142
Score = 78.8 bits (86), Expect = 4e-12
Identities = 83/109 (76%), Gaps = 3/109 (3%)
Strand=Plus/Minus
Query 39 AAGCCACACGGACAAAAAAGGCC---ACCAGCAAAGTCACCACCTAAAGCTTCTTCATCT 95
||||| | || |||||| ||| ||| | ||||| | | || |||||||| |||
Sbjct 2029 AAGCCTAATGGCCAAAAACAGCCTAGACCGCCGAAGTCTTCTTCAAAGGCTTCTTCGTCT 1970
Query 96 AATCCTGAAGAGCTGGAGATTGAGATTGCTGAAGTTCTTTTTGGTTTGA 144
||||| || ||||||||||| |||||||||||||| | | ||||||||
Sbjct 1969 AATCCGGAGGAGCTGGAGATAGAGATTGCTGAAGTCTTGTATGGTTTGA 1921
>seq51588
Length=1420
Score = 75.2 bits (82), Expect = 4e-11
Identities = 102/142 (72%), Gaps = 3/142 (2%)
Strand=Plus/Plus
Query 6 TCTTCATCTAATGTTTCAGTGAGAAAGAAAATTAAGCCACACGGACAAAAAAGGCC---A 62
|| || || |||| |||| ||||||| |||||||| | || ||||| ||| |
Sbjct 113 TCGTCTTCGAATGCTTCAACTCGAAAGAAGATTAAGCCTAATGGCAAAAAACAGCCTAGA 172
Query 63 CCAGCAAAGTCACCACCTAAAGCTTCTTCATCTAATCCTGAAGAGCTGGAGATTGAGATT 122
| | ||||| | | || ||||||| |||||||| || ||||||||||| || |||
Sbjct 173 CTGCCCAAGTCTTCTTCCAAGGCTTCTTTGTCTAATCCGGAGGAGCTGGAGATAGAAATT 232
Query 123 GCTGAAGTTCTTTTTGGTTTGA 144
||| |||| | | ||||||||
Sbjct 233 GCTCAAGTCTTGTATGGTTTGA 254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1960304773990
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |