Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03]
221,855 sequences; 236,770,010 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq206414 77.0 2e-12
seq220787 75.2 7e-12
seq173907 75.2 7e-12
seq123731 75.2 7e-12
seq111136 75.2 7e-12
seq104359 75.2 7e-12
seq58485 75.2 7e-12
seq52969 75.2 7e-12
seq40494 75.2 7e-12
seq21906 75.2 7e-12
seq19711 75.2 7e-12
seq6599 75.2 7e-12
seq220873 71.6 8e-11
seq220818 71.6 8e-11
seq220640 71.6 8e-11
seq214801 71.6 8e-11
seq214144 71.6 8e-11
seq196620 71.6 8e-11
seq175736 71.6 8e-11
seq174289 71.6 8e-11
seq174023 71.6 8e-11
seq173700 71.6 8e-11
seq173565 71.6 8e-11
seq160959 71.6 8e-11
seq128927 71.6 8e-11
seq123827 71.6 8e-11
seq111391 71.6 8e-11
seq109169 71.6 8e-11
seq103380 71.6 8e-11
seq84969 71.6 8e-11
seq81389 71.6 8e-11
seq68998 71.6 8e-11
seq43930 71.6 8e-11
seq11699 71.6 8e-11
>seq206414
Length=271
Score = 77.0 bits (84), Expect = 2e-12
Identities = 60/68 (88%), Gaps = 3/68 (4%)
Strand=Plus/Plus
Query 57 GCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAA 116
|||||| || ||||||| | ||||||||||| |||||||||||||||||||||| | |||
Sbjct 146 GCCATT-CAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAA 202
Query 117 CGCAAGCT 124
||| ||||
Sbjct 203 CGCGAGCT 210
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 85 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 142
Query 122 GCT 124
|||
Sbjct 143 GCT 145
>seq220787
Length=684
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 115 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 172
Query 122 GCT 124
|||
Sbjct 173 GCT 175
>seq173907
Length=555
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Minus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 153 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 96
Query 122 GCT 124
|||
Sbjct 95 GCT 93
>seq123731
Length=435
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 152 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 209
Query 122 GCT 124
|||
Sbjct 210 GCT 212
>seq111136
Length=459
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 260 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 317
Query 122 GCT 124
|||
Sbjct 318 GCT 320
>seq104359
Length=656
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Minus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 255 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 198
Query 122 GCT 124
|||
Sbjct 197 GCT 195
>seq58485
Length=870
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 545 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 602
Query 122 GCT 124
|||
Sbjct 603 GCT 605
>seq52969
Length=1703
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 773 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 830
Query 122 GCT 124
|||
Sbjct 831 GCT 833
>seq40494
Length=2430
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 1110 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 1167
Query 122 GCT 124
|||
Sbjct 1168 GCT 1170
>seq21906
Length=1238
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 443 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 500
Query 122 GCT 124
|||
Sbjct 501 GCT 503
>seq19711
Length=1447
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 1307 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 1364
Query 122 GCT 124
|||
Sbjct 1365 GCT 1367
>seq6599
Length=2255
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Minus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| |||||| | |||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 1628 TTCAATCGGTA-TGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 1571
Query 122 GCT 124
|||
Sbjct 1570 GCT 1568
>seq220873
Length=260
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | | |||| |
Sbjct 4 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CCACGCGA 61
Query 122 GCT 124
|||
Sbjct 62 GCT 64
>seq220818
Length=515
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| | |||||||||||||||||||| | |||||| |
Sbjct 13 TTCAATCGGTAGGA-GCGACGGGCGGTGCGTACAAAGGGCAGGGACGTAGT-CAACGCGA 70
Query 122 GCT 124
|||
Sbjct 71 GCT 73
>seq220640
Length=264
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | ||| || |
Sbjct 3 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAAAGCGA 60
Query 122 GCT 124
|||
Sbjct 61 GCT 63
>seq214801
Length=515
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | |||||||| || |||||||||||||||||||||| | |||||| |
Sbjct 437 TTCAATCGGTAGGA-GCGACGGGAGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 494
Query 122 GCT 124
|||
Sbjct 495 GCT 497
>seq214144
Length=948
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| |||||| ||||| ||||||||||| |||||||||||| |||||| |
Sbjct 466 TTCAATCGGTAG-AAGCGATGGGCGATGTGTACAAAGGACAGGGACGTAAT-CAACGCGA 523
Query 122 GCT 124
|||
Sbjct 524 GCT 526
>seq196620
Length=603
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | ||||| |
Sbjct 320 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGTGA 377
Query 122 GCT 124
|||
Sbjct 378 GCT 380
>seq175736
Length=846
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| | ||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 402 TTCAATTGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 459
Query 122 GCT 124
|||
Sbjct 460 GCT 462
>seq174289
Length=462
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Minus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| |||| || | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 64 TTCAATCGGGAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 7
Query 122 GCT 124
|||
Sbjct 6 GCT 4
>seq174023
Length=658
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | ||||| |
Sbjct 264 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGTGA 321
Query 122 GCT 124
|||
Sbjct 322 GCT 324
>seq173700
Length=470
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||| ||||||||||||||||| | |||||| |
Sbjct 385 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTCCAAAGGGCAGGGACGTAGT-CAACGCGA 442
Query 122 GCT 124
|||
Sbjct 443 GCT 445
>seq173565
Length=466
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||| ||| | |||||| |
Sbjct 368 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGATGTAGT-CAACGCGA 425
Query 122 GCT 124
|||
Sbjct 426 GCT 428
>seq160959
Length=335
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | |||||| |||| |||||||||||||||||||||| | |||||| |
Sbjct 264 TTCAATCGGTAGGA-GCGACGAGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 321
Query 122 GCT 124
|||
Sbjct 322 GCT 324
>seq128927
Length=484
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||| ||||||| |||||||||||||||||||||| | |||||| |
Sbjct 39 TTCAATCGGTAGGA-GCGCCGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 96
Query 122 GCT 124
|||
Sbjct 97 GCT 99
>seq123827
Length=370
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | |||| |||||| |||||||||||||||||||||| | |||||| |
Sbjct 302 TTCAATCGGTAGGA-GCGAGGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 359
Query 122 GCT 124
|||
Sbjct 360 GCT 362
>seq111391
Length=775
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| ||||| |||||||||||||||| | |||||| |
Sbjct 634 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTAAAAAGGGCAGGGACGTAGT-CAACGCGA 691
Query 122 GCT 124
|||
Sbjct 692 GCT 694
>seq109169
Length=324
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||| ||||| | |||||| |
Sbjct 228 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGTACGTAGT-CAACGCGA 285
Query 122 GCT 124
|||
Sbjct 286 GCT 288
>seq103380
Length=868
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||| ||||||||||||||||| | |||||| |
Sbjct 783 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTGCAAAGGGCAGGGACGTAGT-CAACGCGA 840
Query 122 GCT 124
|||
Sbjct 841 GCT 843
>seq84969
Length=812
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| ||||||||| |||||||||||| | |||||| |
Sbjct 264 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAAGGCAGGGACGTAGT-CAACGCGA 321
Query 122 GCT 124
|||
Sbjct 322 GCT 324
>seq81389
Length=609
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | ||||| |
Sbjct 500 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGGGA 557
Query 122 GCT 124
|||
Sbjct 558 GCT 560
>seq68998
Length=297
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||| ||||||| | |||||| |
Sbjct 203 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCATGGACGTAGT-CAACGCGA 260
Query 122 GCT 124
|||
Sbjct 261 GCT 263
>seq43930
Length=2305
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Minus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| ||||||||||||||||||| || | |||||| |
Sbjct 330 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACTTAGT-CAACGCGA 273
Query 122 GCT 124
|||
Sbjct 272 GCT 270
>seq11699
Length=1667
Score = 71.6 bits (78), Expect = 8e-11
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||| | |||||||||||||||||||||| | |||||| |
Sbjct 1249 TTCAATCGGTAGGA-GCGACGGGCTGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 1306
Query 122 GCT 124
|||
Sbjct 1307 GCT 1309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300174368900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |