Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03] 221,855 sequences; 236,770,010 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq206414 77.0 2e-12 seq220787 75.2 7e-12 seq173907 75.2 7e-12 seq123731 75.2 7e-12 seq111136 75.2 7e-12 seq104359 75.2 7e-12 seq58485 75.2 7e-12 seq52969 75.2 7e-12 seq40494 75.2 7e-12 seq21906 75.2 7e-12 seq19711 75.2 7e-12 seq6599 75.2 7e-12 seq220873 71.6 8e-11 seq220818 71.6 8e-11 seq220640 71.6 8e-11 seq214801 71.6 8e-11 seq214144 71.6 8e-11 seq196620 71.6 8e-11 seq175736 71.6 8e-11 seq174289 71.6 8e-11 seq174023 71.6 8e-11 seq173700 71.6 8e-11 seq173565 71.6 8e-11 seq160959 71.6 8e-11 seq128927 71.6 8e-11 seq123827 71.6 8e-11 seq111391 71.6 8e-11 seq109169 71.6 8e-11 seq103380 71.6 8e-11 seq84969 71.6 8e-11 seq81389 71.6 8e-11 seq68998 71.6 8e-11 seq43930 71.6 8e-11 seq11699 71.6 8e-11 >seq206414 Length=271 Score = 77.0 bits (84), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 3/68 (4%) Strand=Plus/Plus Query 57 GCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAA 116 |||||| || ||||||| | ||||||||||| |||||||||||||||||||||| | ||| Sbjct 146 GCCATT-CAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAA 202 Query 117 CGCAAGCT 124 ||| |||| Sbjct 203 CGCGAGCT 210 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 85 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 142 Query 122 GCT 124 ||| Sbjct 143 GCT 145 >seq220787 Length=684 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 115 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 172 Query 122 GCT 124 ||| Sbjct 173 GCT 175 >seq173907 Length=555 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 153 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 96 Query 122 GCT 124 ||| Sbjct 95 GCT 93 >seq123731 Length=435 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 152 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 209 Query 122 GCT 124 ||| Sbjct 210 GCT 212 >seq111136 Length=459 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 260 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 317 Query 122 GCT 124 ||| Sbjct 318 GCT 320 >seq104359 Length=656 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 255 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 198 Query 122 GCT 124 ||| Sbjct 197 GCT 195 >seq58485 Length=870 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 545 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 602 Query 122 GCT 124 ||| Sbjct 603 GCT 605 >seq52969 Length=1703 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 773 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 830 Query 122 GCT 124 ||| Sbjct 831 GCT 833 >seq40494 Length=2430 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 1110 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 1167 Query 122 GCT 124 ||| Sbjct 1168 GCT 1170 >seq21906 Length=1238 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 443 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 500 Query 122 GCT 124 ||| Sbjct 501 GCT 503 >seq19711 Length=1447 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 1307 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 1364 Query 122 GCT 124 ||| Sbjct 1365 GCT 1367 >seq6599 Length=2255 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| |||||| | |||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 1628 TTCAATCGGTA-TGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 1571 Query 122 GCT 124 ||| Sbjct 1570 GCT 1568 >seq220873 Length=260 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | | |||| | Sbjct 4 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CCACGCGA 61 Query 122 GCT 124 ||| Sbjct 62 GCT 64 >seq220818 Length=515 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| | |||||||||||||||||||| | |||||| | Sbjct 13 TTCAATCGGTAGGA-GCGACGGGCGGTGCGTACAAAGGGCAGGGACGTAGT-CAACGCGA 70 Query 122 GCT 124 ||| Sbjct 71 GCT 73 >seq220640 Length=264 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | ||| || | Sbjct 3 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAAAGCGA 60 Query 122 GCT 124 ||| Sbjct 61 GCT 63 >seq214801 Length=515 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | |||||||| || |||||||||||||||||||||| | |||||| | Sbjct 437 TTCAATCGGTAGGA-GCGACGGGAGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 494 Query 122 GCT 124 ||| Sbjct 495 GCT 497 >seq214144 Length=948 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| |||||| ||||| ||||||||||| |||||||||||| |||||| | Sbjct 466 TTCAATCGGTAG-AAGCGATGGGCGATGTGTACAAAGGACAGGGACGTAAT-CAACGCGA 523 Query 122 GCT 124 ||| Sbjct 524 GCT 526 >seq196620 Length=603 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | ||||| | Sbjct 320 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGTGA 377 Query 122 GCT 124 ||| Sbjct 378 GCT 380 >seq175736 Length=846 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| | ||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 402 TTCAATTGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 459 Query 122 GCT 124 ||| Sbjct 460 GCT 462 >seq174289 Length=462 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| |||| || | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 64 TTCAATCGGGAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 7 Query 122 GCT 124 ||| Sbjct 6 GCT 4 >seq174023 Length=658 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | ||||| | Sbjct 264 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGTGA 321 Query 122 GCT 124 ||| Sbjct 322 GCT 324 >seq173700 Length=470 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||| ||||||||||||||||| | |||||| | Sbjct 385 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTCCAAAGGGCAGGGACGTAGT-CAACGCGA 442 Query 122 GCT 124 ||| Sbjct 443 GCT 445 >seq173565 Length=466 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||| ||| | |||||| | Sbjct 368 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGATGTAGT-CAACGCGA 425 Query 122 GCT 124 ||| Sbjct 426 GCT 428 >seq160959 Length=335 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | |||||| |||| |||||||||||||||||||||| | |||||| | Sbjct 264 TTCAATCGGTAGGA-GCGACGAGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 321 Query 122 GCT 124 ||| Sbjct 322 GCT 324 >seq128927 Length=484 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||| ||||||| |||||||||||||||||||||| | |||||| | Sbjct 39 TTCAATCGGTAGGA-GCGCCGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 96 Query 122 GCT 124 ||| Sbjct 97 GCT 99 >seq123827 Length=370 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | |||| |||||| |||||||||||||||||||||| | |||||| | Sbjct 302 TTCAATCGGTAGGA-GCGAGGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 359 Query 122 GCT 124 ||| Sbjct 360 GCT 362 >seq111391 Length=775 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| ||||| |||||||||||||||| | |||||| | Sbjct 634 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTAAAAAGGGCAGGGACGTAGT-CAACGCGA 691 Query 122 GCT 124 ||| Sbjct 692 GCT 694 >seq109169 Length=324 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||| ||||| | |||||| | Sbjct 228 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGTACGTAGT-CAACGCGA 285 Query 122 GCT 124 ||| Sbjct 286 GCT 288 >seq103380 Length=868 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||| ||||||||||||||||| | |||||| | Sbjct 783 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTGCAAAGGGCAGGGACGTAGT-CAACGCGA 840 Query 122 GCT 124 ||| Sbjct 841 GCT 843 >seq84969 Length=812 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| ||||||||| |||||||||||| | |||||| | Sbjct 264 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAAGGCAGGGACGTAGT-CAACGCGA 321 Query 122 GCT 124 ||| Sbjct 322 GCT 324 >seq81389 Length=609 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | ||||| | Sbjct 500 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGGGA 557 Query 122 GCT 124 ||| Sbjct 558 GCT 560 >seq68998 Length=297 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||| ||||||| | |||||| | Sbjct 203 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCATGGACGTAGT-CAACGCGA 260 Query 122 GCT 124 ||| Sbjct 261 GCT 263 >seq43930 Length=2305 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| ||||||||||||||||||| || | |||||| | Sbjct 330 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACTTAGT-CAACGCGA 273 Query 122 GCT 124 ||| Sbjct 272 GCT 270 >seq11699 Length=1667 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||| | |||||||||||||||||||||| | |||||| | Sbjct 1249 TTCAATCGGTAGGA-GCGACGGGCTGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 1306 Query 122 GCT 124 ||| Sbjct 1307 GCT 1309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300174368900