Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03]
221,855 sequences; 236,770,010 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq29745 87.8 2e-15
seq39210 86.0 7e-15
seq2500 86.0 7e-15
seq175065 84.2 3e-14
seq89551 84.2 3e-14
seq49041 84.2 3e-14
seq44529 84.2 3e-14
seq40494 84.2 3e-14
seq27299 84.2 3e-14
seq11574 84.2 3e-14
seq2228 84.2 3e-14
seq205055 80.6 3e-13
seq142330 80.6 3e-13
seq114931 80.6 3e-13
seq52969 80.6 3e-13
seq52468 80.6 3e-13
seq36288 80.6 3e-13
seq2 80.6 3e-13
seq174096 78.8 1e-12
seq151901 78.8 1e-12
seq32456 78.8 1e-12
seq6599 78.8 1e-12
seq137961 73.4 5e-11
seq86646 73.4 5e-11
seq54830 73.4 5e-11
seq8205 73.4 5e-11
>seq29745
Length=2374
Score = 87.8 bits (96), Expect = 2e-15
Identities = 82/102 (80%), Gaps = 2/102 (2%)
Strand=Plus/Plus
Query 15 AACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAG 73
|||| |||||| || | |||||| | |||| |||||||||||||| | | |||||||
Sbjct 2032 AACAGAATAGGACCGAAA-TCCTATGTTGTTATCCCATGCTAATGTATCCAGAGCGTAAG 2090
Query 74 CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGG 115
| |||||||||||||||||||| |||| |||| || ||||
Sbjct 2091 CTTGCTTTGAACACTCTAATTTCTTCAAAGTAACAGCGCTGG 2132
>seq39210
Length=2379
Score = 86.0 bits (94), Expect = 7e-15
Identities = 78/96 (81%), Gaps = 2/96 (2%)
Strand=Plus/Minus
Query 15 AACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAG 73
||||||||||| || | |||||| | |||| |||||||||||||| | | ||||| |
Sbjct 643 AACAAAATAGGACCGAAA-TCCTATGTTGTTATCCCATGCTAATGTATCCAGAGCGTAGG 585
Query 74 CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
| |||||||||||||||||||| |||| |||| ||
Sbjct 584 CTTGCTTTGAACACTCTAATTTCTTCAAAGTAACAG 549
>seq2500
Length=1813
Score = 86.0 bits (94), Expect = 7e-15
Identities = 81/101 (80%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GC 68
|| |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||
Sbjct 493 AAGCCAACAGAATAGGATCGAAA-TCCTATGTTGTTATCCCATGCTAATGTATCCAGAGC 551
Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
||| || |||||||||||||||||||| |||| |||| ||
Sbjct 552 GTAGGCTTGCTTTGAACACTCTAATTTCTTCAAAGTAACAG 592
>seq175065
Length=212
Score = 84.2 bits (92), Expect = 3e-14
Identities = 79/98 (81%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 108 CCAACAGAATAGG-ACTGAAATCCTATGTTGTTATCCCATGCTAATGTATCCAGAGCGTA 50
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||||||||||||||| |||| |||| ||
Sbjct 49 CGCTTGCTTTGAACACTCTAATTTCTTCAAAGTAATAG 12
>seq89551
Length=1050
Score = 84.2 bits (92), Expect = 3e-14
Identities = 79/98 (81%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 798 CCAACAGAATAGGACCGAAA-TCCTATGTTGTTATCCCATGCTAATGTATCCAGAGCGTA 740
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||||||||||||||| |||| |||| ||
Sbjct 739 GGCTTGCTTTGAACACTCTAATTTCTTCAAAGTAACAG 702
>seq49041
Length=1206
Score = 84.2 bits (92), Expect = 3e-14
Identities = 79/98 (81%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 158 CCAACAGAATAGGACCGAAA-TCCTATGTTGTTATCCCATGCTAATGTATCCAGAGCGTA 100
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||||||||||||||| |||| |||| ||
Sbjct 99 GGCTTGCTTTGAACACTCTAATTTCTTCAAAGTAACAG 62
>seq44529
Length=1139
Score = 84.2 bits (92), Expect = 3e-14
Identities = 79/98 (81%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 167 CCAACAGAATAGGACCGAAA-TCCTATGTTGTTATCCCATGCTAATGTATCCAGAGCGTA 225
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||||||||||||||| |||| |||| ||
Sbjct 226 GGCTTGCTTTGAACACTCTAATTTCTTCAAAGTAACAG 263
>seq40494
Length=2430
Score = 84.2 bits (92), Expect = 3e-14
Identities = 79/98 (81%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 1934 CCAACAGAATAGGACCGAAA-TCCTATGTTGTTATCCCATGCTAATGTATCCAGAGCGTA 1992
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||||||||||||||| |||| |||| ||
Sbjct 1993 GGCTTGCTTTGAACACTCTAATTTCTTCAAAGTAACAG 2030
>seq27299
Length=3043
Score = 84.2 bits (92), Expect = 3e-14
Identities = 79/98 (81%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 560 CCAACAGAATAGGACCGAAA-TCCTATGTTGTTATCCCATGCTAATGTATCCAGAGCGTA 618
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||||||||||||||| |||| |||| ||
Sbjct 619 GGCTTGCTTTGAACACTCTAATTTGTTCAAAGTAACAG 656
>seq11574
Length=2129
Score = 84.2 bits (92), Expect = 3e-14
Identities = 79/98 (81%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 1456 CCAACAGAATAGGACCGAAA-TCCTATGTTGTTATCCCATGCTAATGTATCCAGAGCGTA 1514
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||||||||||||||| |||| |||| ||
Sbjct 1515 GGCTTGCTTTGAACACTCTAATTTCTTCAAAGTAACAG 1552
>seq2228
Length=1235
Score = 84.2 bits (92), Expect = 3e-14
Identities = 79/98 (81%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 574 CCAACAGAATAGGACCGAAA-TCCTATGTTGTTATCCCATGCTAATGTATCCAGAGCGTA 632
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||||||||||||||| |||| |||| ||
Sbjct 633 GGCTTGCTTTGAACACTCTAATTTCTTCAAAGTAACAG 670
>seq205055
Length=898
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT-TCGGGCGTA 71
|||| | |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 227 CCAATAGAATAGG-ACTGAAATCCTATGTTGTTATCCCATGCTAATGTATCTAGAGCGTA 169
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||||||||||||||| |||| |||| ||
Sbjct 168 CGCTTGCTTTGAACACTCTAATTTCTTCAAAGTAACAG 131
>seq142330
Length=811
Score = 80.6 bits (88), Expect = 3e-13
Identities = 77/96 (80%), Gaps = 2/96 (2%)
Strand=Plus/Plus
Query 15 AACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAG 73
|||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| |
Sbjct 78 AACAGAATAGG-ACTGAAATCCTATGTTGTTATCCCATGCTAATGTATCCAGAGCGTACG 136
Query 74 CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
| |||||||||||||||||||| |||| |||| ||
Sbjct 137 CTTGCTTTGAACACTCTAATTTCTTCAAAGTAACAG 172
>seq114931
Length=565
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 222 CCAACAGAATAGGACCGAAA-TCCTATGTTGTTATCCCATGCTAATGTATCCAGAGCGTA 280
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 281 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 318
>seq52969
Length=1703
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | |||||
Sbjct 1597 CCAACAGAATAGGACCGAAA-TCCTATGTTGTTATCCCATGCTAATGTATCCATAGCGTA 1655
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||||||||||||||| |||| |||| ||
Sbjct 1656 GGCTTGCTTTGAACACTCTAATTTCTTCAAAGTAACAG 1693
>seq52468
Length=2404
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | | |||
Sbjct 168 CCAACAGAATAGGACCGAAA-TCCTATGTTGTTATCCCATGCTAATGTATCCAGAGTGTA 226
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||||||||||||||| |||| |||| ||
Sbjct 227 GGCTTGCTTTGAACACTCTAATTTCTTCAAAGTAACAG 264
>seq36288
Length=1189
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 293 CCAACGGAATAGGACCGAAA-TCCTATGTTGTTATCCCATGCTAATGTATCCAGAGCGTA 351
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||||||||||||||| |||| |||| ||
Sbjct 352 GGCTTGCTTTGAACACTCTAATTTCTTCAAAGTAACAG 389
>seq2
Length=1022
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | || ||| | |||| |||||||||||||| | | |||||
Sbjct 615 CCAACAGAATAGGACCGAAA-TCATATGTTGTTATCCCATGCTAATGTATCCAGAGCGTA 673
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||||||||||||||| |||| |||| ||
Sbjct 674 GGCTTGCTTTGAACACTCTAATTTCTTCAAAGTAACAG 711
>seq174096
Length=522
Score = 78.8 bits (86), Expect = 1e-12
Identities = 76/95 (80%), Gaps = 2/95 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| ||| |||||||||| | | |||||
Sbjct 429 CCAACAGAATAGGACCGAAA-TCCTATGTTGTTATCCCACGCTAATGTATCCAGAGCGTA 487
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106
|| |||||||||||||||||||| |||| ||||
Sbjct 488 GGCTTGCTTTGAACACTCTAATTTCTTCAAAGTAA 522
>seq151901
Length=489
Score = 78.8 bits (86), Expect = 1e-12
Identities = 73/90 (81%), Gaps = 2/90 (2%)
Strand=Plus/Plus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 74 CCAACAGAATAGGACCGAAA-TCCTATGTTGTTATCCCATGCTAATGTATCCAGAGCGTA 132
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAA 101
|| |||||||||||||||||||| ||||
Sbjct 133 GGCTTGCTTTGAACACTCTAATTTCTTCAA 162
>seq32456
Length=5800
Score = 78.8 bits (86), Expect = 1e-12
Identities = 77/97 (79%), Gaps = 2/97 (2%)
Strand=Plus/Plus
Query 14 CAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGG-CGTAA 72
||||| |||||| || | ||||||| | |||| |||||||||||||| | | |||
Sbjct 883 CAACAGAATAGGACCGAA-GTCCTATGTTGTTATCCCATGCTAATGTATCCAGAACGTCG 941
Query 73 GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||||||||||||||| |||| |||| ||
Sbjct 942 GCTTGCTTTGAACACTCTAATTTCTTCAAAGTAACAG 978
>seq6599
Length=2255
Score = 78.8 bits (86), Expect = 1e-12
Identities = 76/95 (80%), Gaps = 2/95 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 805 CCAACAGAATAGGACCGAAA-TCCTATGTTGTTATCCCATGCTAATGTATCCAGAGCGTA 747
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106
|| |||||||||||||||||||| | || ||||
Sbjct 746 GGCTTGCTTTGAACACTCTAATTTCTTAAAAGTAA 712
>seq137961
Length=693
Score = 73.4 bits (80), Expect = 5e-11
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand=Plus/Plus
Query 44 TTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAG 102
|||| |||||||||||||| | | ||||| || |||||||||||||||||||| ||||
Sbjct 420 TTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAACACTCTAATTTCTTCAAA 479
Query 103 GTAAAAG 109
|||| ||
Sbjct 480 GTAACAG 486
>seq86646
Length=612
Score = 73.4 bits (80), Expect = 5e-11
Identities = 63/77 (82%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 34 TCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTAA 92
|||||| | |||| |||||||||||||| | | ||||| | |||||||||||||||||
Sbjct 15 TCCTATGTTGTTATCCCATGCTAATGTATCCAGAGCGTAGGATTGCTTTGAACACTCTAA 74
Query 93 TTTTCTCAAGGTAAAAG 109
||| |||| |||| ||
Sbjct 75 TTTCTTCAAAGTAACAG 91
>seq54830
Length=856
Score = 73.4 bits (80), Expect = 5e-11
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand=Plus/Plus
Query 44 TTATTCCATGCTAATGTATTCGG-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAG 102
|||| |||||||||||||| | | ||||| || |||||||||||||||||||| ||||
Sbjct 677 TTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAACACTCTAATTTCTTCAAA 736
Query 103 GTAAAAG 109
|||| ||
Sbjct 737 GTAACAG 743
>seq8205
Length=3132
Score = 73.4 bits (80), Expect = 5e-11
Identities = 76/97 (78%), Gaps = 2/97 (2%)
Strand=Plus/Minus
Query 14 CAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAA 72
||||| |||||| || | |||||| | |||| || ||||||||||| | |||||
Sbjct 703 CAACAGAATAGGACCGAAA-TCCTATGTTGTTATCCCTTGCTAATGTATCCAAAGCGTAG 645
Query 73 GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||||||||||||||| |||| |||| ||
Sbjct 644 GCTTGCTTTGAACACTCTAATTTCTTCAAAGTAACAG 608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593920784070
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |