Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03]
221,855 sequences; 236,770,010 total letters
Query= AAMG01001851.1
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
seq221815 87.8 1e-15
seq221784 87.8 1e-15
seq221781 87.8 1e-15
seq221768 87.8 1e-15
seq221727 87.8 1e-15
seq221690 87.8 1e-15
seq221673 87.8 1e-15
seq221120 87.8 1e-15
seq221695 84.2 2e-14
seq221666 84.2 2e-14
seq221851 82.4 5e-14
seq221828 82.4 5e-14
seq221805 82.4 5e-14
seq221760 82.4 5e-14
seq221709 82.4 5e-14
seq221707 82.4 5e-14
seq221697 82.4 5e-14
seq221685 82.4 5e-14
seq221143 82.4 5e-14
seq221844 77.0 2e-12
seq221731 77.0 2e-12
seq15368 77.0 2e-12
seq1641 75.2 8e-12
>seq221815
Length=320
Score = 87.8 bits (96), Expect = 1e-15
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 98 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 157
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 158 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 215
>seq221784
Length=286
Score = 87.8 bits (96), Expect = 1e-15
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 155 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 214
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 215 CTTTCGTCCCTGCTCGAAGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 272
>seq221781
Length=263
Score = 87.8 bits (96), Expect = 1e-15
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 47 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 106
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 107 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 164
>seq221768
Length=383
Score = 87.8 bits (96), Expect = 1e-15
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 174 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 233
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 234 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 291
>seq221727
Length=289
Score = 87.8 bits (96), Expect = 1e-15
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 65 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 124
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 125 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 182
>seq221690
Length=318
Score = 87.8 bits (96), Expect = 1e-15
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 99 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 158
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 159 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 216
>seq221673
Length=327
Score = 87.8 bits (96), Expect = 1e-15
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 144 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 203
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 204 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 261
>seq221120
Length=722
Score = 87.8 bits (96), Expect = 1e-15
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 582 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 641
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 642 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTATGCCTTTGCACT 699
>seq221695
Length=559
Score = 84.2 bits (92), Expect = 2e-14
Identities = 92/121 (76%), Gaps = 6/121 (5%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCG---GATCACTATGAC 57
|| |||||||||||||||||| |||||||||| || | ||||| |||||||| | |
Sbjct 267 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTC---GGCACCGTCAGATCACTAAGGC 323
Query 58 CTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCAC 117
| |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||
Sbjct 324 CGACTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCAC 383
Query 118 T 118
|
Sbjct 384 T 384
>seq221666
Length=287
Score = 84.2 bits (92), Expect = 2e-14
Identities = 92/121 (76%), Gaps = 6/121 (5%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCAC---CGGATCACTATGAC 57
|| |||||||||||||||||| |||||||||| ||| ||| |||||||||| | |
Sbjct 21 TAACTTTTATCCGTTGAGCGACGGCCCTTCCA---CTAGGCACCGTCGGATCACTAAGGC 77
Query 58 CTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCAC 117
| |||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||
Sbjct 78 CGACTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCAC 137
Query 118 T 118
|
Sbjct 138 T 138
>seq221851
Length=228
Score = 82.4 bits (90), Expect = 5e-14
Identities = 89/118 (75%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 90 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 149
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || ||| ||| |||||| | ||| |||| |||||||
Sbjct 150 CTTTCGTCCCTGCTCGACGGGTGTGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 207
>seq221828
Length=306
Score = 82.4 bits (90), Expect = 5e-14
Identities = 89/118 (75%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | |
Sbjct 119 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCAGA 178
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 179 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 236
>seq221805
Length=298
Score = 82.4 bits (90), Expect = 5e-14
Identities = 89/118 (75%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || ||||| |||| | ||
Sbjct 7 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATAACTAAGGCCGA 66
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 67 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 124
>seq221760
Length=232
Score = 82.4 bits (90), Expect = 5e-14
Identities = 89/118 (75%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 104 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 163
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||| | | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 164 CTTTCGTCCCTGCGCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 221
>seq221709
Length=248
Score = 82.4 bits (90), Expect = 5e-14
Identities = 89/118 (75%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 117 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 176
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| || |||||| | ||| |||| |||||||
Sbjct 177 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCGGTCAAGCTCCCTTCTGCCTTTGCACT 234
>seq221707
Length=389
Score = 82.4 bits (90), Expect = 5e-14
Identities = 89/118 (75%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 223 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 282
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| ||| |||||| | ||| |||| ||||||
Sbjct 283 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTCTGCACT 340
>seq221697
Length=283
Score = 82.4 bits (90), Expect = 5e-14
Identities = 89/118 (75%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 140 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 199
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| || |||||| | ||| |||| |||||||
Sbjct 200 CTTTCGTCCCTGCTCGACGGGTGGGTCTTTCAGTCAAGCTCCCTTCTGCCTTTGCACT 257
>seq221685
Length=233
Score = 82.4 bits (90), Expect = 5e-14
Identities = 89/118 (75%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| ||| |||||| || || |||||||||| | ||
Sbjct 30 TAACTTTTATCCGTTGAGCGACGGCACTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 89
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 90 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 147
>seq221143
Length=277
Score = 82.4 bits (90), Expect = 5e-14
Identities = 89/118 (75%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| | || |||||||||| | ||
Sbjct 13 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACACGGCACCGTCGGATCACTAAGGCCGA 72
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 73 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 130
>seq221844
Length=307
Score = 77.0 bits (84), Expect = 2e-12
Identities = 83/110 (75%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 198 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGTCCGA 257
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCC 110
|||||| |||||| | || | ||| ||| |||||| | ||| ||||
Sbjct 258 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCC 307
>seq221731
Length=202
Score = 77.0 bits (84), Expect = 2e-12
Identities = 84/112 (75%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 7 TTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTTTCG 66
||||||||||||||| |||||||||| || || ||||||||| | || ||||||
Sbjct 1 TTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTCAGGCCGACTTTCG 60
Query 67 CATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 61 TCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 112
>seq15368
Length=2370
Score = 77.0 bits (84), Expect = 2e-12
Identities = 90/120 (75%), Gaps = 4/120 (3%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| ||||||||| || |||||||||||||||| || || |||||||||| | ||
Sbjct 701 TAACTTTTATCCCTTAAGCGATGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCAA 642
Query 61 CTTTCGCATCTGCTCTAGTT--GTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| ||| || | || | |||||||| | ||| |||| |||||||
Sbjct 641 CTTTCGTCCCTGCTC--GTTGGGTGGGTCATGTAATCAAGCTCCCTTCTGCCTTTGCACT 584
>seq1641
Length=5786
Score = 75.2 bits (82), Expect = 8e-12
Identities = 90/121 (74%), Gaps = 6/121 (5%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATT---CATAGCCACCGGATCACTATGAC 57
|| |||||||||||||| ||| |||||||||| | ||| | || |||||||| | |
Sbjct 1143 TAACTTTTATCCGTTGATCGACGGCCCTTCCACTCGGCATTGTCA---GATCACTAAGGC 1199
Query 58 CTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCAC 117
| |||||| || || | | || | ||| ||| |||||| ||||| |||| ||||||
Sbjct 1200 CGACTTTCGTCCCTACTAGACTGGTGGGTCTTGCAGTCAAGCTCACTTCTGCCTTTGCAC 1259
Query 118 T 118
|
Sbjct 1260 T 1260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351267878500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |