Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq3496 86.0 1e-14 >seq3496 Length=200309 Score = 86.0 bits (94), Expect = 1e-14 Identities = 206/307 (67%), Gaps = 5/307 (2%) Strand=Plus/Minus Query 13 GGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGGT 72 ||| |||||||||| | |||| ||| || ||||| || |||| | || | | Sbjct 178133 GGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCTGGGGCTCT 178074 Query 73 GACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGC 132 ||| |||||||| ||| | |||||||| ||| | | | | || || ||||||||| Sbjct 178073 GACCGCGTGCCTATTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGGGA 178015 Query 133 TTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTA 192 | ||| ||||| || ||||||||| ||| | ||||| | || || | Sbjct 178014 ACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTATG 177959 Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAG 252 ||| |||| | |||||||| ||| || |||| ||||| ||| | | ||||| Sbjct 177958 GACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAG 177899 Query 253 GACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCA 312 | |||||||| | |||||| | | ||||||| | | || ||||||||||| |||| Sbjct 177898 GTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCA 177839 Query 313 ATCAAAC 319 || ||| Sbjct 177838 CTCGAAC 177832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972550963200