Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq20106 401 9e-110 seq16633 277 3e-72 seq5064 271 1e-70 seq14178 143 4e-32 >seq20106 Length=960890 Score = 401 bits (444), Expect = 9e-110 Identities = 245/256 (96%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 103910 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 103853 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 103852 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 103793 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 103792 CCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 103733 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 103732 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAGCG 103673 Query 241 GCCAT-CTCCCTCGAA 255 ||||| |||||| || Sbjct 103672 GCCATAGTCCCTCTAA 103657 >seq16633 Length=356 Score = 277 bits (306), Expect = 3e-72 Identities = 198/224 (88%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 6 AAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGT 65 ||||||||||||||| |||||||||||| |||||||| ||||||||||| ||| |||||| Sbjct 1 AAGGGCAGGGACGTATTCAACGCGAGCT-GATGACTCACGCTTACTAGGTATT-CCTCGT 58 Query 66 TGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCG 124 |||||| ||| |||||||||| |||||||||||||||| | ||||| |||||||||| Sbjct 59 TGAAGAGCAATAATTGCAATGCTCTATCCCCATCACGACCGAGTTTCACAAGATTACCCA 118 Query 125 GACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCA 184 ||| |||| ||||||||| ||||| || | |||||||||||||||||||||||| Sbjct 119 AGCCTTCCGGCTAAGGTGATAAACTCGCTGGTTCGGTCAGTGTAGCGCGCGTGCGGCCCA 178 Query 185 GAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 179 GAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 222 >seq5064 Length=18333 Score = 271 bits (300), Expect = 1e-70 Identities = 200/229 (87%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 16818 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 16761 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 16760 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 16701 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||||||||||||| ||||| || | ||||||||||||||||||| Sbjct 16700 ACCCAGACCTTTCGGCCAAGGTGATGTACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 16641 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct 16640 GCCCAGAACATCTAAGGGCATCACAGACCTGTTTTTGCCTCGTACTTCC 16592 >seq14178 Length=3042336 Score = 143 bits (158), Expect = 4e-32 Identities = 105/118 (89%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTC-GCGCTTACTAGGAATTT 59 ||||| ||||||| ||||||||||| |||||||| ||||||| | |||||||||||||| Sbjct 2785901 GTACATAGGGCAGAGACGTAGTCAATGCGAGCTT-ATGACTCAGGGCTTACTAGGAATT- 2785958 Query 60 CCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA 117 | | ||||||||||||| |||||||||||||||||| |||| ||||||||||||||| Sbjct 2785959 CTTTGTTGAAGACCAACGATTGCAATGATCTATCCCTATCATAATGAAATTTCAAAGA 2786016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751813504000