Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq5064 482 4e-134 seq20106 239 8e-61 seq18770 123 5e-26 >seq5064 Length=18333 Score = 482 bits (534), Expect = 4e-134 Identities = 293/309 (95%), Gaps = 1/309 (0%) Strand=Plus/Plus Query 10 CGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAG 69 ||| ||| |||||||||||||||| ||||||||||||||||||| ||| |||||| |||| Sbjct 15865 CGGTCGGACCTTTCCTTCTGGGGAGCCGCATGCCCTTCACTGGGCGTGTCGGGGAACCAG 15924 Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15925 GACTTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 15984 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||| Sbjct 15985 TGGAATAATAGAATAGGACA-GAGGTTCTATTTTGTTGGTTTCTAGGACCGCTGTAATGA 16043 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 16044 TTAATAGGGATAGTCGGGGGCGTCCGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 16103 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct 16104 TTGAAGACGAACTACTGCGAAAGCATTCGCCAAGGATGTTTTCATTAATCAGTGAACGAA 16163 Query 310 AGTTAGGGG 318 ||||||||| Sbjct 16164 AGTTAGGGG 16172 >seq20106 Length=960890 Score = 239 bits (264), Expect = 8e-61 Identities = 246/316 (78%), Gaps = 8/316 (3%) Strand=Plus/Plus Query 9 CCGGCCGGGCCTTTCCTTCTG---GGGATCCGCA--TGCCCTTCACTGGGTGTGCCGGGG 63 |||||||| | | ||||||| | ||| ||| || |||| | ||| | | || | Sbjct 102949 CCGGCCGGCTCGTCCCTTCTGCCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGC 103008 Query 64 AGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATAC 122 || | || |||||||||| ||||||||||| |||||||| |||| |||| | |||| Sbjct 103009 CACCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATAC 103068 Query 123 ATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC 182 |||||||||| |||| | |||||| | |||| ||||| |||||| | ||| || Sbjct 103069 ATTAGCATGGGATAACATCATAGGATTT-CGGTCCTATTCTGTTGGCCTTCGGGATCGGA 103127 Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 ||||||||||| ||||| ||||||||| | ||||| || |||||||||||||||||| Sbjct 103128 GTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTT 103187 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 |||||||| ||||| ||| ||||||||||| || |||||||||||||||||||||| Sbjct 103188 GGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-A 103246 Query 303 GAACGAAAGTTAGGGG 318 ||||||||||| |||| Sbjct 103247 GAACGAAAGTTGGGGG 103262 >seq18770 Length=1914 Score = 123 bits (136), Expect = 5e-26 Identities = 111/137 (81%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| ||| | |||| | |||||||||||| Sbjct 136 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCAT 77 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | |||| ||||| |||||| | ||| || |||||||| Sbjct 76 GGGATAACATCATAGGA-TTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 18 Query 191 TAATAGGGATAGTCGGG 207 ||||||||| ||||||| Sbjct 17 TAATAGGGACAGTCGGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914965708800