Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq3496 172 1e-40 seq3682 100 7e-19 >seq3496 Length=200309 Score = 172 bits (190), Expect = 1e-40 Identities = 282/404 (70%), Gaps = 8/404 (2%) Strand=Plus/Minus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| | || |||| |||||||||||||||||||||| ||| ||||||||||| Sbjct 182073 GAATAAGCATCCGCAAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTA 182014 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 |||||| | |||||||||||||| | ||| || | | |||| | | | ||||||| Sbjct 182013 TCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCTGCAATCAAATCCC 181954 Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTG 190 ||||| |||| ||| || | | ||| | | || | | || || | | Sbjct 181953 AGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGTTGGAATACGGTAGGGGCAGAGG 181894 Query 191 GAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCA 250 ||||| ||| ||| |||||||||||||| || | | ||||||||| ||| || ||| Sbjct 181893 GAATTTTTGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCAAAAGCA 181834 Query 251 GCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGAT 310 | ||||| |||||||| | | || ||||| ||||||| || |||||||| Sbjct 181833 CTCTGCTGGGCCGACACTGACATTGAGAGACTAAAGCTAGGGGAGCGAATGAGATTAGAT 181774 Query 311 ACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTG--TTGGGGATTTAC---TTCC 365 |||| ||||||| ||| |||||||| ||||| | || | || || ||| Sbjct 181773 ACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGTGTATCAACCCATTCA 181714 Query 366 TTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || | |||||||||| || |||| |||||||||| ||| Sbjct 181713 GTGCT---GTAGCTAACGTGTTAAGTATCTCGCCTGGGGAGTAC 181673 >seq3682 Length=3594047 Score = 100 bits (110), Expect = 7e-19 Identities = 181/264 (69%), Gaps = 3/264 (1%) Strand=Plus/Plus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| | ||||| | ||||||| || |||||||||| ||| ||||||||||| Sbjct 3524991 GAATAAGCATCAGCTAAATCTGTGCCAGTAGTCGCGGTAATATAGAGGATGCAAGCGTTA 3525050 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 || ||| | | || ||||||||| | ||| || | | |||| | | || |||||| Sbjct 3525051 TCCGAAATGATTAGGTGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCT 3525110 Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTG 190 ||||| |||| ||| | | | ||| | | |||| | || || | | Sbjct 3525111 AGGGCTCAACCCTGGACAGACGGTGGGAACTACCAAGTTGGAGTACGGTAGGGGTAGAGG 3525170 Query 191 GAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCA 250 ||||| | ||| |||||| ||||||||||| || || || | ||| |||||| ||| Sbjct 3525171 GAATTTCCAGTGGAGCAGTAAAATGCGTAGAGAT---CAGAAAGAACAACGGCGAAAGCA 3525227 Query 251 GCCCCCTGGGATAACACTGACGCT 274 | ||||| | ||||| || || Sbjct 3525228 CTCTGCTGGGCTGACACTAACACT 3525251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289269862400