Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq24942 253 5e-65 seq22463 129 1e-27 seq23521 122 2e-25 seq9539 82.4 2e-13 seq6064 82.4 2e-13 seq3665 82.4 2e-13 seq3496 82.4 2e-13 >seq24942 Length=759679 Score = 253 bits (280), Expect = 5e-65 Identities = 303/412 (74%), Gaps = 21/412 (5%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| | |||||||||| | || ||||||||||| | ||| | |||||||||| || Sbjct 234623 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 234682 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 234683 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 234742 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 | |||| ||||| ||||||||||||||||||||| || | ||||| || | || Sbjct 234743 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTT----ATAAC--AC 234796 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246 | | || || |||| |||||||||||| |||| || |||||| || || | | Sbjct 234797 TTCTCCTTTTGACTTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACT 234856 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATG 306 | ||||||| ||||||||||||||||||||||| | |||||||| | | | | | Sbjct 234857 TAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTA 234916 Query 307 AGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCT 366 | | | || || |||| ||||||||||||||||||| | | Sbjct 234917 ATCAAA---AGATAGGAGAGCACC------------CCTTCTCCCGAAGTTACGGGGTCA 234961 Query 367 TTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 ||||||| ||||||||| | ||||||||||||||| | |||| |||||| Sbjct 234962 TTTTGCCGAGTTCCTTCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTAC 235013 >seq22463 Length=267746 Score = 129 bits (142), Expect = 1e-27 Identities = 116/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 ||| |||||| || || ||||||| ||| ||| ||||||| ||| |||||||| Sbjct 135479 ATCATCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTAC 135538 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 ||| || |||| | |||||||||| | ||||||||||||| ||| ||||||| ||||| Sbjct 135539 GCCTTTTGTGCGGTTCGGAACTTATCTGACAAGGAATTTCACTATCTTAGGATGGTTATA 135598 Query 135 GTTACGGCCGCCGTTTACCGGGGCTT 160 ||||| |||||| |||||| |||||| Sbjct 135599 GTTACAGCCGCCATTTACCAGGGCTT 135624 >seq23521 Length=29201 Score = 122 bits (134), Expect = 2e-25 Identities = 194/275 (71%), Gaps = 5/275 (2%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || || | |||| ||| || ||| ||||||||||||| | | |||||||| Sbjct 20881 TAAACAGTATCTGCACTGCTATTCCAATTTCACTGAGCCAATCATCGAGACAGCTGTTGT 20822 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 |||||||| ||||| |||| | | | | ||| | | || || ||| ||||||||||||| Sbjct 20821 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 20762 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT-TCGCGTTA--GCT 183 || | || | || |||||||||||| ||||| ||| ||| ||| || | ||| | Sbjct 20761 CCCTCATCGGTAAGGCCGCCGTTTATCGGGGATTCCATCCAGACCTAACTTTTTAATTTT 20702 Query 184 AACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCG 243 || || | | ||| | ||| ||| |||||| | |||||| | ||| || | | Sbjct 20701 AAGCCTTTTAGTTACCGAGCCGACACTGGGCAGACATCACACTCAATAGTTCGA--TATA 20644 Query 244 TGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | || |||||||||| |||||| | |||||||||| Sbjct 20643 TCTTAGCAGAGTGCTTTGTTTTAATTAAACAGTCG 20609 >seq9539 Length=366 Score = 82.4 bits (90), Expect = 2e-13 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| || || || |||| ||||||||| ||||| |||||| |||||||||||| Sbjct 313 ATCGTTATGCTTTTTGTATCGGTCAGAACTTACCTGACAAAGAATTTTGCTACCTTAGGA 254 Query 127 CCGTTATTGTTACGGCCGCCGTT 149 | ||||| ||||| |||||| || Sbjct 253 CTGTTATAGTTACAGCCGCCATT 231 >seq6064 Length=1292168 Score = 82.4 bits (90), Expect = 2e-13 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| || || || |||| ||||||||| ||||| |||||| |||||||||||| Sbjct 689876 ATCGTTATGCTTTTTGTATCGGTCAGAACTTACCTGACAAAGAATTTTGCTACCTTAGGA 689935 Query 127 CCGTTATTGTTACGGCCGCCGTT 149 | ||||| ||||| |||||| || Sbjct 689936 CTGTTATAGTTACAGCCGCCATT 689958 >seq3665 Length=615 Score = 82.4 bits (90), Expect = 2e-13 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396 ||| | ||||||||||||||||||| || ||||||| |||||||| ||||| ||| Sbjct 54 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 113 Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426 | || ||| ||||||||||||| | |||| Sbjct 114 CGCGCCCCTAGGTATTCTCTACCTACCCAC 143 >seq3496 Length=200309 Score = 82.4 bits (90), Expect = 2e-13 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396 ||| | ||||||||||||||||||| || ||||||| |||||||| ||||| ||| Sbjct 176886 GGCACTCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 176945 Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426 | || ||| ||||||||||||| | |||| Sbjct 176946 CGCGCCCCTAGGTATTCTCTACCTACCCAC 176975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260477235200