Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq5064 367 2e-99 seq16633 322 8e-86 seq20106 300 2e-79 >seq5064 Length=18333 Score = 367 bits (406), Expect = 2e-99 Identities = 237/258 (92%), Gaps = 1/258 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16674 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 16615 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||| ||||||| ||||||||||||| || ||||| |||||||||||||||||||| Sbjct 16614 ACCTGTTTTTGCCTCGTACTTCCATTGGCTTGA-GCCAAAAGTCCCTCTAAGAAGCCAGC 16556 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | | |||| ||| || |||||||||||||||| ||||||||||||||||||| ||||| Sbjct 16555 AATCCACCAAAGTGAATTGGGCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGCAATTA 16496 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 16495 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGA 16436 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 16435 AAGAGCTCTCAATCTGTC 16418 >seq16633 Length=356 Score = 322 bits (356), Expect = 8e-86 Identities = 201/216 (93%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 141 ACTCGCTGGTTCGGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 200 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| ||| | || |||||||||||||||||||||| Sbjct 201 CCTGTTATTGCCTCAAACTTCCATCAGCTAAACGCTGATAGTCCCTCTAAGAAGCCAGCG 260 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 261 ACCAACCAAAGTCGGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 320 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217 |||||||||||||||||||||||||||||||||||| Sbjct 321 CCAGACAAATCACTCCACCAACTAAGAACGGCCATG 356 >seq20106 Length=960890 Score = 300 bits (332), Expect = 2e-79 Identities = 226/261 (87%), Gaps = 6/261 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 103766 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 103707 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||||||||||| | | || |||| | |||||||||||||||||| | Sbjct 103706 CCTGTTATTGCCTCAAACTTCCTTGGCCT--AAGCGGCCATAGTCCCTCTAAGAAGCTGG 103649 Query 120 CCACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 |||| | ||| || |||| |||||||| | ||||||||||||||| ||||| Sbjct 103648 CCACGGAGGGATACCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA 103589 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 103588 TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 103529 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| ||| |||||| Sbjct 103528 AGAAAGAGCTCTCAGTCTGTC 103508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796602393600