Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq5208 408 7e-112 seq5064 408 7e-112 seq24590 399 4e-109 seq14178 223 6e-56 seq12881 113 8e-23 seq23158 91.5 3e-16 >seq5208 Length=1198568 Score = 408 bits (452), Expect = 7e-112 Identities = 267/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| ||| | || | ||||||||||||||||||||||||||||||| Sbjct 725323 TACTAGGTTGAATTACTATTACGACG-CAGTCATCAGTAGGGTAAAACTAACCTGTCTCA 725265 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 725264 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 725205 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 725204 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 725145 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 725144 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 725085 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 725084 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 725032 Score = 408 bits (452), Expect = 7e-112 Identities = 267/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| ||| | || | ||||||||||||||||||||||||||||||| Sbjct 728465 TACTAGGTTGAATTACTATTACGACG-CAGTCATCAGTAGGGTAAAACTAACCTGTCTCA 728407 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 728406 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 728347 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 728346 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 728287 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 728286 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 728227 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 728226 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 728174 >seq5064 Length=18333 Score = 408 bits (452), Expect = 7e-112 Identities = 267/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| ||| | || | ||||||||||||||||||||||||||||||| Sbjct 4623 TACTAGGTTGAATTACTATTACGACG-CAGTCATCAGTAGGGTAAAACTAACCTGTCTCA 4565 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 4564 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 4505 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4504 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 4445 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 4444 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 4385 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 4384 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 4332 >seq24590 Length=364673 Score = 399 bits (442), Expect = 4e-109 Identities = 265/293 (90%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| ||| | || | ||||||||||||||||||||||||||||||| Sbjct 104928 TACTAGGTTGAATTACTATTACGACG-CAGTCATCAGTAGGGTAAAACTAACCTGTCTCA 104870 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 104869 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 104810 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | Sbjct 104809 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATTAAAAAGCAACGTCGCTCT 104750 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 104749 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 104690 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 104689 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 104637 >seq14178 Length=3042336 Score = 223 bits (246), Expect = 6e-56 Identities = 201/249 (81%), Gaps = 3/249 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||| | || ||||||||||||| ||||| || |||||||| ||| ||||||||| || Sbjct 2784615 TCATTAATAAAGTAAAACTAACCTATCTCACGATGGTCTAAATCCAACTCACGTTCT-TA 2784673 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||| ||||||||| ||| ||| ||||||| |||| | ||||||||| | || Sbjct 2784674 TTAGTGAATGAACAATCTAACACTTGGTGAATTCTACTTCACAAAAATAGGAAGAAC-GA 2784732 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||| || ||| |||||||||| |||||||||| |||||| |||||||| |||||| | Sbjct 2784733 CATCAAAAGATTAAAAAGCAACATCGCTATGAATGCTTGGTTGCCACAAAT-AGTTATTC 2784791 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 |||||||||||||||| ||||| || | ||||||| || || ||||||||||||| | Sbjct 2784792 ATGTGGTAACTTTTCTGACACCTGTAACTTCAAATTCTGAAGGTTTAAAGGATCGATAAG 2784851 Query 271 CCACACTTT 279 | ||||||| Sbjct 2784852 CTACACTTT 2784860 >seq12881 Length=504 Score = 113 bits (124), Expect = 8e-23 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct 75 TACTAAGCGGTATTACCATTGGGACGACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 16 Query 61 TGACGGTCTAAACCC 75 |||||||||||||| Sbjct 15 CGACGGTCTAAACCC 1 >seq23158 Length=832 Score = 91.5 bits (100), Expect = 3e-16 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| || | ||| |||||||||||||||||||||||||||||||||| Sbjct 71 TACTAGGTTGAATTACTATCGCGGC-ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 13 Query 61 TGACGGTCTAAA 72 ||||||||||| Sbjct 12 CGACGGTCTAAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854181273600